RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 OSBPP22059 807 aa7.17□□□□□ -1.26
HMGB3P26-201ENST00000560051 APLP1P51693 650 aa7.17□□□□□ -1.26
HMGB3P26-201ENST00000560051 PDZRN3Q9UPQ7 1066 aa7.17□□□□□ -1.26
HMGB3P26-201ENST00000560051 COPS2P61201 443 aa7.16□□□□□ -1.26
HMGB3P26-201ENST00000560051 SWT1Q5T5J6 900 aaKnown RBP7.16□□□□□ -1.26
HMGB3P26-201ENST00000560051 PAXIP1Q6ZW49 1069 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P26-201ENST00000560051 TMUB1Q9BVT8 246 aa7.16□□□□□ -1.26
HMGB3P26-201ENST00000560051 CDHR5Q9HBB8 845 aa7.16□□□□□ -1.26
HMGB3P26-201ENST00000560051 PRIM1P49642 420 aaKnown RBP7.15□□□□□ -1.26
HMGB3P26-201ENST00000560051 PADI6Q6TGC4 694 aa7.15□□□□□ -1.26
HMGB3P26-201ENST00000560051 C3orf80F5H4A9 247 aa7.14□□□□□ -1.27
HMGB3P26-201ENST00000560051 SUPT5HO00267 1087 aaKnown RBP7.14□□□□□ -1.27
HMGB3P26-201ENST00000560051 TRIM26Q12899 539 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P26-201ENST00000560051 ZNF787Q6DD87 383 aa7.13□□□□□ -1.27
HMGB3P26-201ENST00000560051 NKX2-3Q8TAU0 364 aa7.13□□□□□ -1.27
HMGB3P26-201ENST00000560051 PCDHB3Q9Y5E6 796 aa7.13□□□□□ -1.27
HMGB3P26-201ENST00000560051 ZPR1O75312 459 aa7.12□□□□□ -1.27
HMGB3P26-201ENST00000560051 TTC13Q8NBP0 860 aa7.1□□□□□ -1.27
HMGB3P26-201ENST00000560051 SLC19A1P41440 591 aa7.09□□□□□ -1.27
HMGB3P26-201ENST00000560051 KMT5BQ4FZB7 885 aa7.09□□□□□ -1.27
HMGB3P26-201ENST00000560051 RBM46Q8TBY0 533 aaKnown RBP7.09□□□□□ -1.27
HMGB3P26-201ENST00000560051 NPDC1Q9NQX5 325 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P26-201ENST00000560051 LCE2BO14633 110 aa7.08□□□□□ -1.28
HMGB3P26-201ENST00000560051 DNAJB2P25686 324 aa7.08□□□□□ -1.28
HMGB3P26-201ENST00000560051 EYA1Q99502 592 aa7.08□□□□□ -1.28
HMGB3P26-201ENST00000560051 PKDCCQ504Y2 493 aa7.07□□□□□ -1.28
HMGB3P26-201ENST00000560051 CDK11AQ9UQ88 783 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P26-201ENST00000560051 HMGB1P09429 215 aaKnown RBP7.06□□□□□ -1.28
HMGB3P26-201ENST00000560051 UBTFP17480 764 aaKnown RBP7.06□□□□□ -1.28
HMGB3P26-201ENST00000560051 HRCP23327 699 aa7.06□□□□□ -1.28
HMGB3P26-201ENST00000560051 BLOC1S3Q6QNY0 202 aa7.06□□□□□ -1.28
HMGB3P26-201ENST00000560051 ARHGEF1Q92888 912 aaKnown RBP7.05□□□□□ -1.28
HMGB3P26-201ENST00000560051 RNF223E7ERA6 249 aa7.04□□□□□ -1.28
HMGB3P26-201ENST00000560051 RSPH4AQ5TD94 716 aa7.04□□□□□ -1.28
HMGB3P26-201ENST00000560051 NUTM2FA1L443 756 aa7.03□□□□□ -1.28
HMGB3P26-201ENST00000560051 DGAT1O75907 488 aa7.03□□□□□ -1.28
HMGB3P26-201ENST00000560051 ZNF598Q86UK7 904 aaKnown RBP7.03□□□□□ -1.28
HMGB3P26-201ENST00000560051 ANKLE1Q8NAG6 615 aa7.03□□□□□ -1.28
HMGB3P26-201ENST00000560051 TSHZ2Q9NRE2 1034 aa7.03□□□□□ -1.28
HMGB3P26-201ENST00000560051 ACTN4O43707 911 aaKnown RBP7.02□□□□□ -1.29
HMGB3P26-201ENST00000560051 NR1I2O75469 434 aa7.02□□□□□ -1.29
HMGB3P26-201ENST00000560051 PTGDRQ13258 359 aa7.02□□□□□ -1.29
HMGB3P26-201ENST00000560051 SPRYD7Q5W111 196 aa7.02□□□□□ -1.29
HMGB3P26-201ENST00000560051 TMEM134Q9H6X4 195 aa7.02□□□□□ -1.29
HMGB3P26-201ENST00000560051 CFHP08603 1231 aa7.01□□□□□ -1.29
HMGB3P26-201ENST00000560051 RCCD1A6NED2 376 aa7□□□□□ -1.29
HMGB3P26-201ENST00000560051 S1PR4O95977 384 aa7□□□□□ -1.29
HMGB3P26-201ENST00000560051 MLLT3P42568 568 aaPredicted RBP7□□□□□ -1.29
HMGB3P26-201ENST00000560051 ZNF697Q5TEC3 545 aa7□□□□□ -1.29
HMGB3P26-201ENST00000560051 ZNF775Q96BV0 537 aaPredicted RBP7□□□□□ -1.29
HMGB3P26-201ENST00000560051 TLL1O43897 1013 aa6.99□□□□□ -1.29
HMGB3P26-201ENST00000560051 ADH1BP00325 375 aa6.99□□□□□ -1.29
HMGB3P26-201ENST00000560051 PRR20EP86478 221 aa6.99□□□□□ -1.29
HMGB3P26-201ENST00000560051 PRR20CP86479 221 aa6.99□□□□□ -1.29
HMGB3P26-201ENST00000560051 PRR20DP86480 221 aa6.99□□□□□ -1.29
HMGB3P26-201ENST00000560051 PRR20BP86481 221 aa6.99□□□□□ -1.29
HMGB3P26-201ENST00000560051 PRR20AP86496 221 aa6.99□□□□□ -1.29
HMGB3P26-201ENST00000560051 SLC6A16Q9GZN6 736 aa6.99□□□□□ -1.29
HMGB3P26-201ENST00000560051 ADGRG1Q9Y653 693 aa6.99□□□□□ -1.29
HMGB3P26-201ENST00000560051 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.98□□□□□ -1.29
HMGB3P26-201ENST00000560051 FAM187AA6NFU0 413 aa6.98□□□□□ -1.29
HMGB3P26-201ENST00000560051 PPEF1O14829 653 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P26-201ENST00000560051 FCHSD2O94868 740 aa6.98□□□□□ -1.29
HMGB3P26-201ENST00000560051 OATP04181 439 aa6.98□□□□□ -1.29
HMGB3P26-201ENST00000560051 TRIM67Q6ZTA4 783 aa6.97□□□□□ -1.29
HMGB3P26-201ENST00000560051 TNFRSF10AO00220 468 aa6.96□□□□□ -1.3
HMGB3P26-201ENST00000560051 P3H3Q8IVL6 736 aa6.96□□□□□ -1.3
HMGB3P26-201ENST00000560051 LIAT1Q6ZQX7 453 aa6.95□□□□□ -1.3
HMGB3P26-201ENST00000560051 KCNV2Q8TDN2 545 aa6.95□□□□□ -1.3
HMGB3P26-201ENST00000560051 FAM161AQ3B820 660 aa6.94□□□□□ -1.3
HMGB3P26-201ENST00000560051 SCUBE3Q8IX30 993 aa6.94□□□□□ -1.3
HMGB3P26-201ENST00000560051 SPSB2Q99619 263 aa6.94□□□□□ -1.3
HMGB3P26-201ENST00000560051 LOC105371045A0A1W2PR82 267 aa6.93□□□□□ -1.3
HMGB3P26-201ENST00000560051 GDF9O60383 454 aa6.92□□□□□ -1.3
HMGB3P26-201ENST00000560051 CD2BP2O95400 341 aaKnown RBP6.92□□□□□ -1.3
HMGB3P26-201ENST00000560051 SLC10A3P09131 477 aa6.92□□□□□ -1.3
HMGB3P26-201ENST00000560051 FOXC1Q12948 553 aa6.92□□□□□ -1.3
HMGB3P26-201ENST00000560051 LMOD2Q6P5Q4 547 aa6.92□□□□□ -1.3
HMGB3P26-201ENST00000560051 EMID1Q96A84 441 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P26-201ENST00000560051 CDK11BP21127 795 aaKnown RBP6.91□□□□□ -1.3
HMGB3P26-201ENST00000560051 SMYD5Q6GMV2 418 aa6.91□□□□□ -1.3
HMGB3P26-201ENST00000560051 HIC1Q14526 733 aa6.9□□□□□ -1.3
HMGB3P26-201ENST00000560051 PUS10Q3MIT2 529 aaKnown RBP6.9□□□□□ -1.3
HMGB3P26-201ENST00000560051 RDH13Q8NBN7 331 aa6.9□□□□□ -1.3
HMGB3P26-201ENST00000560051 PXYLP1Q8TE99 480 aa6.9□□□□□ -1.3
HMGB3P26-201ENST00000560051 ZBTB24O43167 697 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P26-201ENST00000560051 RPIAP49247 311 aa6.89□□□□□ -1.31
HMGB3P26-201ENST00000560051 CYP4X1Q8N118 509 aa6.89□□□□□ -1.31
HMGB3P26-201ENST00000560051 SHROOM4Q9ULL8 1493 aa6.87□□□□□ -1.31
HMGB3P26-201ENST00000560051 POTECB2RU33 542 aa6.87□□□□□ -1.31
HMGB3P26-201ENST00000560051 FMNL1O95466 1100 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P26-201ENST00000560051 METTL3Q86U44 580 aaKnown RBP6.87□□□□□ -1.31
HMGB3P26-201ENST00000560051 BCL11AQ9H165 835 aa6.87□□□□□ -1.31
HMGB3P26-201ENST00000560051 AAASQ9NRG9 546 aa6.87□□□□□ -1.31
HMGB3P26-201ENST00000560051 SEMA3EO15041 775 aa6.86□□□□□ -1.31
HMGB3P26-201ENST00000560051 ST8SIA5O15466 376 aa6.86□□□□□ -1.31
HMGB3P26-201ENST00000560051 HSP90B1P14625 803 aaKnown RBP6.86□□□□□ -1.31
HMGB3P26-201ENST00000560051 ATP6V1AP38606 617 aa6.86□□□□□ -1.31
HMGB3P26-201ENST00000560051 GRIPAP1Q4V328 841 aa6.86□□□□□ -1.31
HMGB3P26-201ENST00000560051 PLA2G2CQ5R387 149 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms