RNA–Protein interactions for RNA: ENST00000559948.5

PSMA4-216, Transcript of proteasome subunit alpha 4, humanhuman

TSL 5

Gene PSMA4, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-216ENST00000559948 RPRD2Q5VT52 1461 aaKnown RBP13.61□□□□□ -0.23
PSMA4-216ENST00000559948 TMEM94Q12767 1356 aa13.6□□□□□ -0.23
PSMA4-216ENST00000559948 FAM135BQ49AJ0 1406 aa13.59□□□□□ -0.23
PSMA4-216ENST00000559948 PROSER2Q86WR7 435 aaPredicted RBP13.59□□□□□ -0.23
PSMA4-216ENST00000559948 ZFYVE9O95405 1425 aa13.58□□□□□ -0.24
PSMA4-216ENST00000559948 XIRP1Q702N8 1843 aaKnown RBP13.58□□□□□ -0.24
PSMA4-216ENST00000559948 RGS17Q9UGC6 210 aaPredicted RBP13.58□□□□□ -0.24
PSMA4-216ENST00000559948 ROCK1Q13464 1354 aa13.58□□□□□ -0.24
PSMA4-216ENST00000559948 ADGRB3O60242 1522 aa13.57□□□□□ -0.24
PSMA4-216ENST00000559948 TBX22Q9Y458 520 aa13.56□□□□□ -0.24
PSMA4-216ENST00000559948 PLEKHG1Q9ULL1 1385 aa13.56□□□□□ -0.24
PSMA4-216ENST00000559948 HDGFP51858 240 aaKnown RBP13.55□□□□□ -0.24
PSMA4-216ENST00000559948 PPARGC1BQ86YN6 1023 aaKnown RBP13.54□□□□□ -0.24
PSMA4-216ENST00000559948 RIMS2Q9UQ26 1411 aa13.54□□□□□ -0.24
PSMA4-216ENST00000559948 BCANQ96GW7 911 aa13.53□□□□□ -0.24
PSMA4-216ENST00000559948 TMEM131LA2VDJ0 1609 aa13.53□□□□□ -0.24
PSMA4-216ENST00000559948 NUTM2DQ5VT03 806 aaPredicted RBP13.52□□□□□ -0.25
PSMA4-216ENST00000559948 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.52□□□□□ -0.25
PSMA4-216ENST00000559948 SLAIN2Q9P270 581 aa13.52□□□□□ -0.25
PSMA4-216ENST00000559948 NUP155O75694 1391 aa13.52□□□□□ -0.25
PSMA4-216ENST00000559948 UNC13BO14795 1591 aa13.52□□□□□ -0.25
PSMA4-216ENST00000559948 NWD1Q149M9 1564 aa13.51□□□□□ -0.25
PSMA4-216ENST00000559948 ADAMTS13Q76LX8 1427 aa13.51□□□□□ -0.25
PSMA4-216ENST00000559948 ITGAEP38570 1179 aa13.51□□□□□ -0.25
PSMA4-216ENST00000559948 NKTRP30414 1462 aaKnown RBP13.5□□□□□ -0.25
PSMA4-216ENST00000559948 CHGAP10645 457 aaKnown RBP13.5□□□□□ -0.25
PSMA4-216ENST00000559948 PPP1R15AO75807 674 aaPredicted RBP13.49□□□□□ -0.25
PSMA4-216ENST00000559948 E9PCH4 1651 aa13.49□□□□□ -0.25
PSMA4-216ENST00000559948 NCOA3Q9Y6Q9 1424 aa13.47□□□□□ -0.25
PSMA4-216ENST00000559948 MSH6P52701 1360 aa13.47□□□□□ -0.25
PSMA4-216ENST00000559948 GCC2Q8IWJ2 1684 aa13.47□□□□□ -0.25
PSMA4-216ENST00000559948 IQGAP3Q86VI3 1631 aa13.47□□□□□ -0.25
PSMA4-216ENST00000559948 CHD2O14647 1828 aaKnown RBP13.46□□□□□ -0.25
PSMA4-216ENST00000559948 C19orf44Q9H6X5 657 aa13.46□□□□□ -0.25
PSMA4-216ENST00000559948 MYO5BQ9ULV0 1848 aa13.46□□□□□ -0.26
PSMA4-216ENST00000559948 PIK3R4Q99570 1358 aa13.45□□□□□ -0.26
PSMA4-216ENST00000559948 ROBO1Q9Y6N7 1651 aa13.45□□□□□ -0.26
PSMA4-216ENST00000559948 POTEAQ6S8J7 498 aa13.45□□□□□ -0.26
PSMA4-216ENST00000559948 AMOTL2Q9Y2J4 779 aa13.45□□□□□ -0.26
PSMA4-216ENST00000559948 PTPRUQ92729 1446 aa13.45□□□□□ -0.26
PSMA4-216ENST00000559948 CADPS2Q86UW7 1296 aa13.41□□□□□ -0.26
PSMA4-216ENST00000559948 RRBP1Q9P2E9 1410 aaKnown RBP13.4□□□□□ -0.26
PSMA4-216ENST00000559948 METP08581 1390 aa13.4□□□□□ -0.26
PSMA4-216ENST00000559948 JCADQ9P266 1359 aa13.4□□□□□ -0.26
PSMA4-216ENST00000559948 NAIPQ13075 1403 aa13.39□□□□□ -0.27
PSMA4-216ENST00000559948 ATF3P18847 181 aa13.39□□□□□ -0.27
PSMA4-216ENST00000559948 C14orf37Q86TY3 774 aa13.39□□□□□ -0.27
PSMA4-216ENST00000559948 DIP2AQ14689 1571 aa13.38□□□□□ -0.27
PSMA4-216ENST00000559948 BRINP3Q76B58 766 aa13.38□□□□□ -0.27
PSMA4-216ENST00000559948 ZNF326Q5BKZ1 582 aaKnown RBP13.37□□□□□ -0.27
PSMA4-216ENST00000559948 NRXN3Q9Y4C0 1643 aa13.36□□□□□ -0.27
PSMA4-216ENST00000559948 TRPM2O94759 1503 aa13.36□□□□□ -0.27
PSMA4-216ENST00000559948 SETBP1Q9Y6X0 1596 aa13.36□□□□□ -0.27
PSMA4-216ENST00000559948 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.36□□□□□ -0.27
PSMA4-216ENST00000559948 COL16A1Q07092 1604 aaPredicted RBP13.35□□□□□ -0.27
PSMA4-216ENST00000559948 SPATA31A6Q5VVP1 1343 aa13.35□□□□□ -0.27
PSMA4-216ENST00000559948 PHLPP1O60346 1717 aa13.34□□□□□ -0.27
PSMA4-216ENST00000559948 CNKSR2Q8WXI2 1034 aa13.34□□□□□ -0.27
PSMA4-216ENST00000559948 SPHKAPQ2M3C7 1700 aa13.33□□□□□ -0.28
PSMA4-216ENST00000559948 LRP6O75581 1613 aa13.32□□□□□ -0.28
PSMA4-216ENST00000559948 AHDC1Q5TGY3 1603 aaPredicted RBP13.32□□□□□ -0.28
PSMA4-216ENST00000559948 DCCP43146 1447 aa13.32□□□□□ -0.28
PSMA4-216ENST00000559948 NEXMIFQ5QGS0 1516 aa13.32□□□□□ -0.28
PSMA4-216ENST00000559948 CLTCL1P53675 1640 aa13.31□□□□□ -0.28
PSMA4-216ENST00000559948 HFM1A2PYH4 1435 aa13.31□□□□□ -0.28
PSMA4-216ENST00000559948 MST1RQ04912 1400 aa13.31□□□□□ -0.28
PSMA4-216ENST00000559948 XRN1Q8IZH2 1706 aaKnown RBP13.31□□□□□ -0.28
PSMA4-216ENST00000559948 VGFO15240 615 aaPredicted RBP13.31□□□□□ -0.28
PSMA4-216ENST00000559948 TRIM52Q96A61 297 aa13.3□□□□□ -0.28
PSMA4-216ENST00000559948 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
PSMA4-216ENST00000559948 DDX17Q92841 729 aaKnown RBP13.29□□□□□ -0.28
PSMA4-216ENST00000559948 RPGRIP1LQ68CZ1 1315 aa13.29□□□□□ -0.28
PSMA4-216ENST00000559948 SETD5Q9C0A6 1442 aa13.29□□□□□ -0.28
PSMA4-216ENST00000559948 LRRC59Q96AG4 307 aaKnown RBP13.28□□□□□ -0.28
PSMA4-216ENST00000559948 ZNF772Q68DY9 489 aaPredicted RBP13.27□□□□□ -0.29
PSMA4-216ENST00000559948 ROBO2Q9HCK4 1378 aa13.27□□□□□ -0.29
PSMA4-216ENST00000559948 ADGRL3Q9HAR2 1447 aa13.27□□□□□ -0.29
PSMA4-216ENST00000559948 ASXL1Q8IXJ9 1541 aa13.27□□□□□ -0.29
PSMA4-216ENST00000559948 NUTM2BA6NNL0 878 aaPredicted RBP13.25□□□□□ -0.29
PSMA4-216ENST00000559948 NUTM2EB1AL46 878 aaPredicted RBP13.25□□□□□ -0.29
PSMA4-216ENST00000559948 NUTM2AQ8IVF1 878 aaPredicted RBP13.25□□□□□ -0.29
PSMA4-216ENST00000559948 ORAI2Q96SN7 254 aa13.25□□□□□ -0.29
PSMA4-216ENST00000559948 PRAG1Q86YV5 1406 aa13.24□□□□□ -0.29
PSMA4-216ENST00000559948 MEX3CQ5U5Q3 659 aaKnown RBP13.24□□□□□ -0.29
PSMA4-216ENST00000559948 SHPRHQ149N8 1683 aa13.24□□□□□ -0.29
PSMA4-216ENST00000559948 C1orf167Q5SNV9 1468 aa13.23□□□□□ -0.29
PSMA4-216ENST00000559948 PTCH1Q13635 1447 aa13.23□□□□□ -0.29
PSMA4-216ENST00000559948 SOS2Q07890 1332 aaPredicted RBP13.22□□□□□ -0.29
PSMA4-216ENST00000559948 ADGRF5Q8IZF2 1346 aa13.22□□□□□ -0.29
PSMA4-216ENST00000559948 RXRBP28702 533 aa13.22□□□□□ -0.29
PSMA4-216ENST00000559948 MPHOSPH9Q99550 1183 aa13.22□□□□□ -0.29
PSMA4-216ENST00000559948 PNPLA6Q8IY17 1366 aa13.21□□□□□ -0.29
PSMA4-216ENST00000559948 NHSL1Q5SYE7 1610 aa13.21□□□□□ -0.29
PSMA4-216ENST00000559948 KIF1BO60333 1816 aa13.21□□□□□ -0.29
PSMA4-216ENST00000559948 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.29
PSMA4-216ENST00000559948 SETD1AO15047 1707 aaKnown RBP13.21□□□□□ -0.3
PSMA4-216ENST00000559948 AFF2P51816 1311 aa13.2□□□□□ -0.3
PSMA4-216ENST00000559948 HOXD11P31277 338 aaPredicted RBP13.2□□□□□ -0.3
PSMA4-216ENST00000559948 RGL3Q3MIN7 710 aa13.2□□□□□ -0.3
PSMA4-216ENST00000559948 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms