RNA–Protein interactions for RNA: ENST00000559729.5

SEC11A-208, Transcript of SEC11 homolog A, signal peptidase complex subunit, human

TSL 2 BASIC

Gene SEC11A, Length 1,256 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC11A-208	ENST00000559729	ZFYVE9	O95405	1425 aa		32.11	■■■□□ 2.73
SEC11A-208	ENST00000559729	CHGA	P10645	457 aa	Known RBP	32.11	■■■□□ 2.73
SEC11A-208	ENST00000559729	RIMS2	Q9UQ26	1411 aa		32.09	■■■□□ 2.73
SEC11A-208	ENST00000559729	BCAN	Q96GW7	911 aa		32.09	■■■□□ 2.73
SEC11A-208	ENST00000559729	XIRP1	Q702N8	1843 aa	Known RBP	32.07	■■■□□ 2.73
SEC11A-208	ENST00000559729	NAIP	Q13075	1403 aa		32.04	■■■□□ 2.72
SEC11A-208	ENST00000559729	PPP1R15A	O75807	674 aa	Predicted RBP	32.04	■■■□□ 2.72
SEC11A-208	ENST00000559729	KCNA6	P17658	529 aa		32.03	■■■□□ 2.72
SEC11A-208	ENST00000559729	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.02	■■■□□ 2.72
SEC11A-208	ENST00000559729	PLEKHG1	Q9ULL1	1385 aa		32.02	■■■□□ 2.72
SEC11A-208	ENST00000559729	ILDR2	Q71H61	639 aa		32	■■■□□ 2.71
SEC11A-208	ENST00000559729	TMEM94	Q12767	1356 aa		31.99	■■■□□ 2.71
SEC11A-208	ENST00000559729	RBM33	Q96EV2	1170 aa	Known RBP	31.99	■■■□□ 2.71
SEC11A-208	ENST00000559729	HDGF	P51858	240 aa	Known RBP	31.98	■■■□□ 2.71
SEC11A-208	ENST00000559729	NWD1	Q149M9	1564 aa		31.97	■■■□□ 2.71
SEC11A-208	ENST00000559729	SPHKAP	Q2M3C7	1700 aa		31.97	■■■□□ 2.71
SEC11A-208	ENST00000559729	PROSER2	Q86WR7	435 aa	Predicted RBP	31.95	■■■□□ 2.71
SEC11A-208	ENST00000559729	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.95	■■■□□ 2.71
SEC11A-208	ENST00000559729	NKTR	P30414	1462 aa	Known RBP	31.92	■■■□□ 2.7
SEC11A-208	ENST00000559729	HFM1	A2PYH4	1435 aa		31.91	■■■□□ 2.7
SEC11A-208	ENST00000559729	ADAMTS13	Q76LX8	1427 aa		31.89	■■■□□ 2.7
SEC11A-208	ENST00000559729	CHD2	O14647	1828 aa	Known RBP	31.89	■■■□□ 2.69
SEC11A-208	ENST00000559729	TBX22	Q9Y458	520 aa		31.87	■■■□□ 2.69
SEC11A-208	ENST00000559729	TRIM52	Q96A61	297 aa		31.86	■■■□□ 2.69
SEC11A-208	ENST00000559729	CLTCL1	P53675	1640 aa		31.85	■■■□□ 2.69
SEC11A-208	ENST00000559729	MED1	Q15648	1581 aa	Predicted RBP	31.84	■■■□□ 2.69
SEC11A-208	ENST00000559729	TRPM2	O94759	1503 aa		31.82	■■■□□ 2.68
SEC11A-208	ENST00000559729	ZNF326	Q5BKZ1	582 aa	Known RBP	31.82	■■■□□ 2.68
SEC11A-208	ENST00000559729	DIP2A	Q14689	1571 aa		31.81	■■■□□ 2.68
SEC11A-208	ENST00000559729	MSH6	P52701	1360 aa		31.78	■■■□□ 2.68
SEC11A-208	ENST00000559729	FAM135B	Q49AJ0	1406 aa		31.77	■■■□□ 2.68
SEC11A-208	ENST00000559729	NRXN3	Q9Y4C0	1643 aa		31.75	■■■□□ 2.67
SEC11A-208	ENST00000559729	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.75	■■■□□ 2.67
SEC11A-208	ENST00000559729	ROBO1	Q9Y6N7	1651 aa		31.74	■■■□□ 2.67
SEC11A-208	ENST00000559729	PIK3R4	Q99570	1358 aa		31.73	■■■□□ 2.67
SEC11A-208	ENST00000559729	PTPRU	Q92729	1446 aa		31.73	■■■□□ 2.67
SEC11A-208	ENST00000559729	NEXMIF	Q5QGS0	1516 aa		31.72	■■■□□ 2.67
SEC11A-208	ENST00000559729	SETBP1	Q9Y6X0	1596 aa		31.72	■■■□□ 2.67
SEC11A-208	ENST00000559729	KIF1B	O60333	1816 aa		31.71	■■■□□ 2.67
SEC11A-208	ENST00000559729	AMOTL2	Q9Y2J4	779 aa		31.7	■■■□□ 2.67
SEC11A-208	ENST00000559729	C14orf37	Q86TY3	774 aa		31.68	■■■□□ 2.66
SEC11A-208	ENST00000559729	SLAIN2	Q9P270	581 aa		31.67	■■■□□ 2.66
SEC11A-208	ENST00000559729	SOCS7	O14512	581 aa		31.66	■■■□□ 2.66
SEC11A-208	ENST00000559729	FOXD1	Q16676	465 aa		31.66	■■■□□ 2.66
SEC11A-208	ENST00000559729	NCOA3	Q9Y6Q9	1424 aa		31.65	■■■□□ 2.66
SEC11A-208	ENST00000559729	MET	P08581	1390 aa		31.64	■■■□□ 2.66
SEC11A-208	ENST00000559729	XRN1	Q8IZH2	1706 aa	Known RBP	31.62	■■■□□ 2.65
SEC11A-208	ENST00000559729	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.61	■■■□□ 2.65
SEC11A-208	ENST00000559729	PHF23	Q9BUL5	403 aa	Predicted RBP	31.61	■■■□□ 2.65
SEC11A-208	ENST00000559729	C19orf44	Q9H6X5	657 aa		31.58	■■■□□ 2.65
SEC11A-208	ENST00000559729	ATF3	P18847	181 aa		31.54	■■■□□ 2.64
SEC11A-208	ENST00000559729	CADPS2	Q86UW7	1296 aa		31.54	■■■□□ 2.64
SEC11A-208	ENST00000559729	MPHOSPH9	Q99550	1183 aa		31.54	■■■□□ 2.64
SEC11A-208	ENST00000559729	PHLPP1	O60346	1717 aa		31.54	■■■□□ 2.64
SEC11A-208	ENST00000559729	VGF	O15240	615 aa	Predicted RBP	31.51	■■■□□ 2.63
SEC11A-208	ENST00000559729	PPL	O60437	1756 aa		31.5	■■■□□ 2.63
SEC11A-208	ENST00000559729	RPGRIP1L	Q68CZ1	1315 aa		31.49	■■■□□ 2.63
SEC11A-208	ENST00000559729	SETD1A	O15047	1707 aa	Known RBP	31.49	■■■□□ 2.63
SEC11A-208	ENST00000559729	CCDC144A	A2RUR9	1427 aa		31.48	■■■□□ 2.63
SEC11A-208	ENST00000559729	SETD5	Q9C0A6	1442 aa		31.47	■■■□□ 2.63
SEC11A-208	ENST00000559729	COL16A1	Q07092	1604 aa	Predicted RBP	31.46	■■■□□ 2.63
SEC11A-208	ENST00000559729	DCC	P43146	1447 aa		31.44	■■■□□ 2.62
SEC11A-208	ENST00000559729	RGS17	Q9UGC6	210 aa	Predicted RBP	31.44	■■■□□ 2.62
SEC11A-208	ENST00000559729	RGL3	Q3MIN7	710 aa		31.43	■■■□□ 2.62
SEC11A-208	ENST00000559729	NALCN	Q8IZF0	1738 aa		31.41	■■■□□ 2.62
SEC11A-208	ENST00000559729	BRINP3	Q76B58	766 aa		31.41	■■■□□ 2.62
SEC11A-208	ENST00000559729	JCAD	Q9P266	1359 aa		31.41	■■■□□ 2.62
SEC11A-208	ENST00000559729	SPATA31E1	Q6ZUB1	1445 aa		31.41	■■■□□ 2.62
SEC11A-208	ENST00000559729	ADGRL3	Q9HAR2	1447 aa		31.41	■■■□□ 2.62
SEC11A-208	ENST00000559729	MST1R	Q04912	1400 aa		31.4	■■■□□ 2.62
SEC11A-208	ENST00000559729	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.39	■■■□□ 2.62
SEC11A-208	ENST00000559729	ADGRF5	Q8IZF2	1346 aa		31.38	■■■□□ 2.61
SEC11A-208	ENST00000559729	RAB3GAP2	Q9H2M9	1393 aa		31.38	■■■□□ 2.61
SEC11A-208	ENST00000559729	ROBO2	Q9HCK4	1378 aa		31.38	■■■□□ 2.61
SEC11A-208	ENST00000559729	PTCH1	Q13635	1447 aa		31.37	■■■□□ 2.61
SEC11A-208	ENST00000559729	ASXL1	Q8IXJ9	1541 aa		31.35	■■■□□ 2.61
SEC11A-208	ENST00000559729	IFT172	Q9UG01	1749 aa		31.34	■■■□□ 2.61
SEC11A-208	ENST00000559729	ACIN1	Q9UKV3	1341 aa	Known RBP	31.3	■■■□□ 2.6
SEC11A-208	ENST00000559729	PRAG1	Q86YV5	1406 aa		31.3	■■■□□ 2.6
SEC11A-208	ENST00000559729	ANKRD30B	Q9BXX2	1392 aa		31.29	■■■□□ 2.6
SEC11A-208	ENST00000559729	LRP6	O75581	1613 aa		31.27	■■■□□ 2.6
SEC11A-208	ENST00000559729	POTEA	Q6S8J7	498 aa		31.26	■■■□□ 2.59
SEC11A-208	ENST00000559729	NHSL1	Q5SYE7	1610 aa		31.26	■■■□□ 2.59
SEC11A-208	ENST00000559729	SHPRH	Q149N8	1683 aa		31.25	■■■□□ 2.59
SEC11A-208	ENST00000559729	DDX17	Q92841	729 aa	Known RBP	31.25	■■■□□ 2.59
SEC11A-208	ENST00000559729	SPATA31A6	Q5VVP1	1343 aa		31.24	■■■□□ 2.59
SEC11A-208	ENST00000559729	C1orf167	Q5SNV9	1468 aa		31.23	■■■□□ 2.59
SEC11A-208	ENST00000559729	PIK3C2G	O75747	1445 aa		31.23	■■■□□ 2.59
SEC11A-208	ENST00000559729	STK26	Q9P289	416 aa		31.22	■■■□□ 2.59
SEC11A-208	ENST00000559729	TMEM132E	Q6IEE7	984 aa		31.21	■■■□□ 2.59
SEC11A-208	ENST00000559729	ORAI2	Q96SN7	254 aa		31.17	■■■□□ 2.58
SEC11A-208	ENST00000559729	LRPPRC	P42704	1394 aa	Known RBP	31.17	■■■□□ 2.58
SEC11A-208	ENST00000559729	MEX3C	Q5U5Q3	659 aa	Known RBP	31.16	■■■□□ 2.58
SEC11A-208	ENST00000559729	WAPL	Q7Z5K2	1190 aa		31.16	■■■□□ 2.58
SEC11A-208	ENST00000559729	TECPR2	O15040	1411 aa		31.15	■■■□□ 2.58
SEC11A-208	ENST00000559729	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.15	■■■□□ 2.58
SEC11A-208	ENST00000559729	NUTM2E	B1AL46	878 aa	Predicted RBP	31.15	■■■□□ 2.58
SEC11A-208	ENST00000559729	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.15	■■■□□ 2.58
SEC11A-208	ENST00000559729	LRRC59	Q96AG4	307 aa	Known RBP	31.13	■■■□□ 2.57
SEC11A-208	ENST00000559729	PLEKHH1	Q9ULM0	1364 aa		31.13	■■■□□ 2.57

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms