RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 SLC52A1Q9NWF4 448 aa17.33■□□□□ 0.36
HERC1-204ENST00000559715 RBM33Q96EV2 1170 aaKnown RBP17.32■□□□□ 0.36
HERC1-204ENST00000559715 GCC2Q8IWJ2 1684 aa17.32■□□□□ 0.36
HERC1-204ENST00000559715 ROBO1Q9Y6N7 1651 aa17.32■□□□□ 0.36
HERC1-204ENST00000559715 UNC13BO14795 1591 aa17.32■□□□□ 0.36
HERC1-204ENST00000559715 STAG3Q9UJ98 1225 aa17.31■□□□□ 0.36
HERC1-204ENST00000559715 E9PCH4 1651 aa17.3■□□□□ 0.36
HERC1-204ENST00000559715 NKTRP30414 1462 aaKnown RBP17.3■□□□□ 0.36
HERC1-204ENST00000559715 FAM50AQ14320 339 aaKnown RBP17.28■□□□□ 0.36
HERC1-204ENST00000559715 PROSER2Q86WR7 435 aaPredicted RBP17.27■□□□□ 0.36
HERC1-204ENST00000559715 PLEKHG1Q9ULL1 1385 aa17.27■□□□□ 0.35
HERC1-204ENST00000559715 RIMS2Q9UQ26 1411 aa17.25■□□□□ 0.35
HERC1-204ENST00000559715 IQGAP3Q86VI3 1631 aa17.25■□□□□ 0.35
HERC1-204ENST00000559715 ADAMTS13Q76LX8 1427 aa17.24■□□□□ 0.35
HERC1-204ENST00000559715 ROCK1Q13464 1354 aa17.23■□□□□ 0.35
HERC1-204ENST00000559715 POTEAQ6S8J7 498 aa17.21■□□□□ 0.35
HERC1-204ENST00000559715 TBX22Q9Y458 520 aa17.21■□□□□ 0.35
HERC1-204ENST00000559715 SLAIN2Q9P270 581 aa17.2■□□□□ 0.34
HERC1-204ENST00000559715 PHLPP1O60346 1717 aa17.19■□□□□ 0.34
HERC1-204ENST00000559715 COL16A1Q07092 1604 aaPredicted RBP17.18■□□□□ 0.34
HERC1-204ENST00000559715 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.18■□□□□ 0.34
HERC1-204ENST00000559715 MSH6P52701 1360 aa17.17■□□□□ 0.34
HERC1-204ENST00000559715 NCOA3Q9Y6Q9 1424 aa17.17■□□□□ 0.34
HERC1-204ENST00000559715 NRXN3Q9Y4C0 1643 aa17.17■□□□□ 0.34
HERC1-204ENST00000559715 PTPRUQ92729 1446 aa17.16■□□□□ 0.34
HERC1-204ENST00000559715 NUTM2DQ5VT03 806 aaPredicted RBP17.16■□□□□ 0.34
HERC1-204ENST00000559715 DIP2AQ14689 1571 aa17.15■□□□□ 0.34
HERC1-204ENST00000559715 BCANQ96GW7 911 aa17.14■□□□□ 0.33
HERC1-204ENST00000559715 PIK3R4Q99570 1358 aa17.14■□□□□ 0.33
HERC1-204ENST00000559715 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.13■□□□□ 0.33
HERC1-204ENST00000559715 NUP155O75694 1391 aa17.13■□□□□ 0.33
HERC1-204ENST00000559715 PPP1R15AO75807 674 aaPredicted RBP17.12■□□□□ 0.33
HERC1-204ENST00000559715 HDGFP51858 240 aaKnown RBP17.12■□□□□ 0.33
HERC1-204ENST00000559715 SPHKAPQ2M3C7 1700 aa17.12■□□□□ 0.33
HERC1-204ENST00000559715 XRN1Q8IZH2 1706 aaKnown RBP17.12■□□□□ 0.33
HERC1-204ENST00000559715 LRP6O75581 1613 aa17.1■□□□□ 0.33
HERC1-204ENST00000559715 AHDC1Q5TGY3 1603 aaPredicted RBP17.1■□□□□ 0.33
HERC1-204ENST00000559715 CHGAP10645 457 aaKnown RBP17.1■□□□□ 0.33
HERC1-204ENST00000559715 JCADQ9P266 1359 aa17.1■□□□□ 0.33
HERC1-204ENST00000559715 SETBP1Q9Y6X0 1596 aa17.1■□□□□ 0.33
HERC1-204ENST00000559715 C19orf44Q9H6X5 657 aa17.09■□□□□ 0.33
HERC1-204ENST00000559715 TRPM2O94759 1503 aa17.09■□□□□ 0.33
HERC1-204ENST00000559715 SETD1AO15047 1707 aaKnown RBP17.08■□□□□ 0.32
HERC1-204ENST00000559715 SHPRHQ149N8 1683 aa17.07■□□□□ 0.32
HERC1-204ENST00000559715 AMOTL2Q9Y2J4 779 aa17.07■□□□□ 0.32
HERC1-204ENST00000559715 PPARGC1BQ86YN6 1023 aaKnown RBP17.06■□□□□ 0.32
HERC1-204ENST00000559715 ITGAEP38570 1179 aa17.05■□□□□ 0.32
HERC1-204ENST00000559715 CLTCL1P53675 1640 aa17.05■□□□□ 0.32
HERC1-204ENST00000559715 METP08581 1390 aa17.04■□□□□ 0.32
HERC1-204ENST00000559715 CADPS2Q86UW7 1296 aa17.04■□□□□ 0.32
HERC1-204ENST00000559715 NEXMIFQ5QGS0 1516 aa17.04■□□□□ 0.32
HERC1-204ENST00000559715 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
HERC1-204ENST00000559715 DCCP43146 1447 aa17.03■□□□□ 0.32
HERC1-204ENST00000559715 NHSL1Q5SYE7 1610 aa17.02■□□□□ 0.31
HERC1-204ENST00000559715 MST1RQ04912 1400 aa17.02■□□□□ 0.31
HERC1-204ENST00000559715 SPATA31A6Q5VVP1 1343 aa17.01■□□□□ 0.31
HERC1-204ENST00000559715 ATF3P18847 181 aa17■□□□□ 0.31
HERC1-204ENST00000559715 NAIPQ13075 1403 aa17■□□□□ 0.31
HERC1-204ENST00000559715 NALCNQ8IZF0 1738 aa17■□□□□ 0.31
HERC1-204ENST00000559715 RRBP1Q9P2E9 1410 aaKnown RBP17■□□□□ 0.31
HERC1-204ENST00000559715 ASXL1Q8IXJ9 1541 aa17■□□□□ 0.31
HERC1-204ENST00000559715 C14orf37Q86TY3 774 aa16.99■□□□□ 0.31
HERC1-204ENST00000559715 KIF1BO60333 1816 aa16.98■□□□□ 0.31
HERC1-204ENST00000559715 SETD5Q9C0A6 1442 aa16.97■□□□□ 0.31
HERC1-204ENST00000559715 SRCAPQ6ZRS2 3230 aa16.96■□□□□ 0.31
HERC1-204ENST00000559715 ADGRL3Q9HAR2 1447 aa16.96■□□□□ 0.3
HERC1-204ENST00000559715 LAMC1P11047 1609 aa16.95■□□□□ 0.3
HERC1-204ENST00000559715 DDX17Q92841 729 aaKnown RBP16.93■□□□□ 0.3
HERC1-204ENST00000559715 ZNF326Q5BKZ1 582 aaKnown RBP16.92■□□□□ 0.3
HERC1-204ENST00000559715 PRAG1Q86YV5 1406 aa16.92■□□□□ 0.3
HERC1-204ENST00000559715 PPLO60437 1756 aa16.91■□□□□ 0.3
HERC1-204ENST00000559715 ZNF772Q68DY9 489 aaPredicted RBP16.9■□□□□ 0.3
HERC1-204ENST00000559715 ROBO2Q9HCK4 1378 aa16.89■□□□□ 0.3
HERC1-204ENST00000559715 C1orf167Q5SNV9 1468 aa16.89■□□□□ 0.29
HERC1-204ENST00000559715 EP400Q96L91 3159 aa16.89■□□□□ 0.29
HERC1-204ENST00000559715 UPF1Q92900 1129 aaKnown RBP eCLIP16.89■□□□□ 0.29
HERC1-204ENST00000559715 PNPLA6Q8IY17 1366 aa16.89■□□□□ 0.29
HERC1-204ENST00000559715 HFM1A2PYH4 1435 aa16.88■□□□□ 0.29
HERC1-204ENST00000559715 PTCH1Q13635 1447 aa16.88■□□□□ 0.29
HERC1-204ENST00000559715 CDK12Q9NYV4 1490 aaPredicted RBP16.87■□□□□ 0.29
HERC1-204ENST00000559715 NUTM2BA6NNL0 878 aaPredicted RBP16.86■□□□□ 0.29
HERC1-204ENST00000559715 NUTM2EB1AL46 878 aaPredicted RBP16.86■□□□□ 0.29
HERC1-204ENST00000559715 MEX3CQ5U5Q3 659 aaKnown RBP16.86■□□□□ 0.29
HERC1-204ENST00000559715 NUTM2AQ8IVF1 878 aaPredicted RBP16.86■□□□□ 0.29
HERC1-204ENST00000559715 LRRC59Q96AG4 307 aaKnown RBP16.86■□□□□ 0.29
HERC1-204ENST00000559715 TRIM52Q96A61 297 aa16.85■□□□□ 0.29
HERC1-204ENST00000559715 AFF2P51816 1311 aa16.85■□□□□ 0.29
HERC1-204ENST00000559715 ORAI2Q96SN7 254 aa16.84■□□□□ 0.29
HERC1-204ENST00000559715 SOS2Q07890 1332 aaPredicted RBP16.84■□□□□ 0.29
HERC1-204ENST00000559715 VGFO15240 615 aaPredicted RBP16.83■□□□□ 0.28
HERC1-204ENST00000559715 RXRBP28702 533 aa16.83■□□□□ 0.28
HERC1-204ENST00000559715 RPGRIP1LQ68CZ1 1315 aa16.83■□□□□ 0.28
HERC1-204ENST00000559715 FOXD1Q16676 465 aa16.82■□□□□ 0.28
HERC1-204ENST00000559715 IFT172Q9UG01 1749 aa16.82■□□□□ 0.28
HERC1-204ENST00000559715 COL22A1Q8NFW1 1626 aaPredicted RBP16.81■□□□□ 0.28
HERC1-204ENST00000559715 RGS12O14924 1447 aa16.79■□□□□ 0.28
HERC1-204ENST00000559715 SPATA31E1Q6ZUB1 1445 aa16.79■□□□□ 0.28
HERC1-204ENST00000559715 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
HERC1-204ENST00000559715 C8orf37Q96NL8 207 aa16.78■□□□□ 0.28
HERC1-204ENST00000559715 QTRT2Q9H974 415 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms