RNA–Protein interactions for RNA: ENST00000559417.1

PCSK6-208, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 5

Gene PCSK6, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-208ENST00000559417 SENP3Q9H4L4 574 aaPredicted RBP27.76■■■□□ 2.03
PCSK6-208ENST00000559417 CHGAP10645 457 aaKnown RBP27.75■■■□□ 2.03
PCSK6-208ENST00000559417 PPP1R15AO75807 674 aaPredicted RBP27.74■■■□□ 2.03
PCSK6-208ENST00000559417 ZFYVE9O95405 1425 aa27.74■■■□□ 2.03
PCSK6-208ENST00000559417 RRBP1Q9P2E9 1410 aaKnown RBP27.74■■■□□ 2.03
PCSK6-208ENST00000559417 RIMS2Q9UQ26 1411 aa27.74■■■□□ 2.03
PCSK6-208ENST00000559417 ILDR2Q71H61 639 aa27.72■■■□□ 2.03
PCSK6-208ENST00000559417 NWD1Q149M9 1564 aa27.69■■■□□ 2.02
PCSK6-208ENST00000559417 PLEKHG1Q9ULL1 1385 aa27.69■■■□□ 2.02
PCSK6-208ENST00000559417 SPHKAPQ2M3C7 1700 aa27.69■■■□□ 2.02
PCSK6-208ENST00000559417 KCNA6P17658 529 aa27.68■■■□□ 2.02
PCSK6-208ENST00000559417 TMEM94Q12767 1356 aa27.67■■■□□ 2.02
PCSK6-208ENST00000559417 MED1Q15648 1581 aaPredicted RBP27.66■■■□□ 2.02
PCSK6-208ENST00000559417 NKTRP30414 1462 aaKnown RBP27.66■■■□□ 2.02
PCSK6-208ENST00000559417 HDGFP51858 240 aaKnown RBP27.66■■■□□ 2.02
PCSK6-208ENST00000559417 PROSER2Q86WR7 435 aaPredicted RBP27.63■■■□□ 2.01
PCSK6-208ENST00000559417 NUTM2DQ5VT03 806 aaPredicted RBP27.62■■■□□ 2.01
PCSK6-208ENST00000559417 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.62■■■□□ 2.01
PCSK6-208ENST00000559417 CHD2O14647 1828 aaKnown RBP27.62■■■□□ 2.01
PCSK6-208ENST00000559417 RBM33Q96EV2 1170 aaKnown RBP27.61■■■□□ 2.01
PCSK6-208ENST00000559417 NAIPQ13075 1403 aa27.6■■■□□ 2.01
PCSK6-208ENST00000559417 DIP2AQ14689 1571 aa27.57■■■□□ 2
PCSK6-208ENST00000559417 CLTCL1P53675 1640 aa27.53■■■□□ 2
PCSK6-208ENST00000559417 ADAMTS13Q76LX8 1427 aa27.53■■■□□ 2
PCSK6-208ENST00000559417 MSH6P52701 1360 aa27.53■■■□□ 2
PCSK6-208ENST00000559417 ROBO1Q9Y6N7 1651 aa27.52■■■□□ 2
PCSK6-208ENST00000559417 TBX22Q9Y458 520 aa27.52■■■□□ 2
PCSK6-208ENST00000559417 HFM1A2PYH4 1435 aa27.51■■□□□ 1.99
PCSK6-208ENST00000559417 TRPM2O94759 1503 aa27.51■■□□□ 1.99
PCSK6-208ENST00000559417 SOCS7O14512 581 aa27.5■■□□□ 1.99
PCSK6-208ENST00000559417 ZNF326Q5BKZ1 582 aaKnown RBP27.5■■□□□ 1.99
PCSK6-208ENST00000559417 FAM135BQ49AJ0 1406 aa27.5■■□□□ 1.99
PCSK6-208ENST00000559417 KIF1BO60333 1816 aa27.48■■□□□ 1.99
PCSK6-208ENST00000559417 TRIM52Q96A61 297 aa27.48■■□□□ 1.99
PCSK6-208ENST00000559417 PHF23Q9BUL5 403 aaPredicted RBP27.47■■□□□ 1.99
PCSK6-208ENST00000559417 NRXN3Q9Y4C0 1643 aa27.45■■□□□ 1.99
PCSK6-208ENST00000559417 C14orf37Q86TY3 774 aa27.45■■□□□ 1.98
PCSK6-208ENST00000559417 PIK3R4Q99570 1358 aa27.45■■□□□ 1.98
PCSK6-208ENST00000559417 SETBP1Q9Y6X0 1596 aa27.43■■□□□ 1.98
PCSK6-208ENST00000559417 NEXMIFQ5QGS0 1516 aa27.41■■□□□ 1.98
PCSK6-208ENST00000559417 NCOA3Q9Y6Q9 1424 aa27.39■■□□□ 1.97
PCSK6-208ENST00000559417 PHLPP1O60346 1717 aa27.38■■□□□ 1.97
PCSK6-208ENST00000559417 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.38■■□□□ 1.97
PCSK6-208ENST00000559417 SLC4A1APQ9BWU0 796 aaKnown RBP27.38■■□□□ 1.97
PCSK6-208ENST00000559417 PTPRUQ92729 1446 aa27.38■■□□□ 1.97
PCSK6-208ENST00000559417 XRN1Q8IZH2 1706 aaKnown RBP27.38■■□□□ 1.97
PCSK6-208ENST00000559417 SLAIN2Q9P270 581 aa27.37■■□□□ 1.97
PCSK6-208ENST00000559417 AMOTL2Q9Y2J4 779 aa27.37■■□□□ 1.97
PCSK6-208ENST00000559417 ATF3P18847 181 aa27.3■■□□□ 1.96
PCSK6-208ENST00000559417 METP08581 1390 aa27.3■■□□□ 1.96
PCSK6-208ENST00000559417 CADPS2Q86UW7 1296 aa27.29■■□□□ 1.96
PCSK6-208ENST00000559417 C19orf44Q9H6X5 657 aa27.29■■□□□ 1.96
PCSK6-208ENST00000559417 FOXD1Q16676 465 aa27.26■■□□□ 1.95
PCSK6-208ENST00000559417 PPLO60437 1756 aa27.26■■□□□ 1.95
PCSK6-208ENST00000559417 COL16A1Q07092 1604 aaPredicted RBP27.26■■□□□ 1.95
PCSK6-208ENST00000559417 DCCP43146 1447 aa27.24■■□□□ 1.95
PCSK6-208ENST00000559417 SETD1AO15047 1707 aaKnown RBP27.23■■□□□ 1.95
PCSK6-208ENST00000559417 NALCNQ8IZF0 1738 aa27.21■■□□□ 1.95
PCSK6-208ENST00000559417 VGFO15240 615 aaPredicted RBP27.21■■□□□ 1.95
PCSK6-208ENST00000559417 JCADQ9P266 1359 aa27.21■■□□□ 1.95
PCSK6-208ENST00000559417 AHDC1Q5TGY3 1603 aaPredicted RBP27.2■■□□□ 1.95
PCSK6-208ENST00000559417 CCDC144AA2RUR9 1427 aa27.2■■□□□ 1.94
PCSK6-208ENST00000559417 RPGRIP1LQ68CZ1 1315 aa27.18■■□□□ 1.94
PCSK6-208ENST00000559417 ADGRL3Q9HAR2 1447 aa27.18■■□□□ 1.94
PCSK6-208ENST00000559417 RGS17Q9UGC6 210 aaPredicted RBP27.16■■□□□ 1.94
PCSK6-208ENST00000559417 MPHOSPH9Q99550 1183 aa27.15■■□□□ 1.94
PCSK6-208ENST00000559417 ASXL1Q8IXJ9 1541 aa27.15■■□□□ 1.94
PCSK6-208ENST00000559417 MST1RQ04912 1400 aa27.15■■□□□ 1.94
PCSK6-208ENST00000559417 BRINP3Q76B58 766 aa27.14■■□□□ 1.94
PCSK6-208ENST00000559417 PTCH1Q13635 1447 aa27.14■■□□□ 1.93
PCSK6-208ENST00000559417 SHPRHQ149N8 1683 aa27.12■■□□□ 1.93
PCSK6-208ENST00000559417 IFT172Q9UG01 1749 aa27.11■■□□□ 1.93
PCSK6-208ENST00000559417 SETD5Q9C0A6 1442 aa27.11■■□□□ 1.93
PCSK6-208ENST00000559417 NHSL1Q5SYE7 1610 aa27.1■■□□□ 1.93
PCSK6-208ENST00000559417 RGL3Q3MIN7 710 aa27.09■■□□□ 1.93
PCSK6-208ENST00000559417 ROBO2Q9HCK4 1378 aa27.09■■□□□ 1.93
PCSK6-208ENST00000559417 SPATA31E1Q6ZUB1 1445 aa27.07■■□□□ 1.92
PCSK6-208ENST00000559417 LRP6O75581 1613 aa27.06■■□□□ 1.92
PCSK6-208ENST00000559417 SPATA31A6Q5VVP1 1343 aa27.06■■□□□ 1.92
PCSK6-208ENST00000559417 MEX3CQ5U5Q3 659 aaKnown RBP27.04■■□□□ 1.92
PCSK6-208ENST00000559417 POTEAQ6S8J7 498 aa27.04■■□□□ 1.92
PCSK6-208ENST00000559417 ADGRF5Q8IZF2 1346 aa27.04■■□□□ 1.92
PCSK6-208ENST00000559417 ACIN1Q9UKV3 1341 aaKnown RBP27.04■■□□□ 1.92
PCSK6-208ENST00000559417 PRAG1Q86YV5 1406 aa27.04■■□□□ 1.92
PCSK6-208ENST00000559417 ANKRD30BQ9BXX2 1392 aa27.03■■□□□ 1.92
PCSK6-208ENST00000559417 RAB3GAP2Q9H2M9 1393 aa27.02■■□□□ 1.92
PCSK6-208ENST00000559417 C1orf167Q5SNV9 1468 aa27■■□□□ 1.91
PCSK6-208ENST00000559417 DDX17Q92841 729 aaKnown RBP26.98■■□□□ 1.91
PCSK6-208ENST00000559417 NUTM2BA6NNL0 878 aaPredicted RBP26.96■■□□□ 1.91
PCSK6-208ENST00000559417 NUTM2EB1AL46 878 aaPredicted RBP26.96■■□□□ 1.91
PCSK6-208ENST00000559417 NUTM2AQ8IVF1 878 aaPredicted RBP26.96■■□□□ 1.91
PCSK6-208ENST00000559417 PIK3C2GO75747 1445 aa26.96■■□□□ 1.91
PCSK6-208ENST00000559417 KNDC1Q76NI1 1749 aa26.96■■□□□ 1.91
PCSK6-208ENST00000559417 STK26Q9P289 416 aa26.95■■□□□ 1.9
PCSK6-208ENST00000559417 CDC42BPGQ6DT37 1551 aa26.95■■□□□ 1.9
PCSK6-208ENST00000559417 LRRC59Q96AG4 307 aaKnown RBP26.93■■□□□ 1.9
PCSK6-208ENST00000559417 LAMC1P11047 1609 aa26.91■■□□□ 1.9
PCSK6-208ENST00000559417 LRPPRCP42704 1394 aaKnown RBP26.91■■□□□ 1.9
PCSK6-208ENST00000559417 TECPR2O15040 1411 aa26.9■■□□□ 1.9
PCSK6-208ENST00000559417 TMEM132EQ6IEE7 984 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms