RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 COPS2P61201 443 aa9.56□□□□□ -0.88
CASC4-206ENST00000558847 PPP1R18Q6NYC8 613 aa9.55□□□□□ -0.88
CASC4-206ENST00000558847 GPIHBP1Q8IV16 184 aa9.55□□□□□ -0.88
CASC4-206ENST00000558847 EYA1Q99502 592 aa9.55□□□□□ -0.88
CASC4-206ENST00000558847 PRKD2Q9BZL6 878 aa9.54□□□□□ -0.88
CASC4-206ENST00000558847 RBM46Q8TBY0 533 aaKnown RBP9.53□□□□□ -0.88
CASC4-206ENST00000558847 DNAJB2P25686 324 aa9.52□□□□□ -0.89
CASC4-206ENST00000558847 PRR14Q9BWN1 585 aa9.52□□□□□ -0.89
CASC4-206ENST00000558847 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.52□□□□□ -0.89
CASC4-206ENST00000558847 FCHSD2O94868 740 aa9.51□□□□□ -0.89
CASC4-206ENST00000558847 GGCXP38435 758 aa9.51□□□□□ -0.89
CASC4-206ENST00000558847 NKX2-3Q8TAU0 364 aa9.51□□□□□ -0.89
CASC4-206ENST00000558847 PCDHB3Q9Y5E6 796 aa9.5□□□□□ -0.89
CASC4-206ENST00000558847 GFRA3O60609 400 aa9.49□□□□□ -0.89
CASC4-206ENST00000558847 LAPTM4AQ15012 233 aa9.49□□□□□ -0.89
CASC4-206ENST00000558847 FAM161AQ3B820 660 aa9.49□□□□□ -0.89
CASC4-206ENST00000558847 HIC1Q14526 733 aa9.48□□□□□ -0.89
CASC4-206ENST00000558847 ADGRG1Q9Y653 693 aa9.48□□□□□ -0.89
CASC4-206ENST00000558847 ZC3H15Q8WU90 426 aaKnown RBP9.47□□□□□ -0.89
CASC4-206ENST00000558847 RCCD1A6NED2 376 aa9.46□□□□□ -0.9
CASC4-206ENST00000558847 GNPATO15228 680 aa9.46□□□□□ -0.9
CASC4-206ENST00000558847 ZPR1O75312 459 aa9.46□□□□□ -0.9
CASC4-206ENST00000558847 FECHP22830 423 aa9.46□□□□□ -0.9
CASC4-206ENST00000558847 KMT5BQ4FZB7 885 aa9.46□□□□□ -0.9
CASC4-206ENST00000558847 TMEM134Q9H6X4 195 aa9.46□□□□□ -0.9
CASC4-206ENST00000558847 BLOC1S3Q6QNY0 202 aa9.45□□□□□ -0.9
CASC4-206ENST00000558847 V9GY48 417 aaPredicted RBP9.45□□□□□ -0.9
CASC4-206ENST00000558847 ZMYND10O75800 440 aa9.42□□□□□ -0.9
CASC4-206ENST00000558847 CFHP08603 1231 aa9.42□□□□□ -0.9
CASC4-206ENST00000558847 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.41□□□□□ -0.9
CASC4-206ENST00000558847 OATP04181 439 aa9.41□□□□□ -0.9
CASC4-206ENST00000558847 TMUB1Q9BVT8 246 aa9.41□□□□□ -0.9
CASC4-206ENST00000558847 NRG2O14511 850 aaPredicted RBP9.4□□□□□ -0.9
CASC4-206ENST00000558847 MAP2K5Q13163 448 aa9.4□□□□□ -0.9
CASC4-206ENST00000558847 TRAF7Q6Q0C0 670 aa9.4□□□□□ -0.9
CASC4-206ENST00000558847 ACTN4O43707 911 aaKnown RBP9.39□□□□□ -0.91
CASC4-206ENST00000558847 TLL1O43897 1013 aa9.39□□□□□ -0.91
CASC4-206ENST00000558847 BARGINQ6ZT62 677 aa9.39□□□□□ -0.91
CASC4-206ENST00000558847 PDZRN3Q9UPQ7 1066 aa9.39□□□□□ -0.91
CASC4-206ENST00000558847 RSPH4AQ5TD94 716 aa9.38□□□□□ -0.91
CASC4-206ENST00000558847 PXYLP1Q8TE99 480 aa9.37□□□□□ -0.91
CASC4-206ENST00000558847 RNF223E7ERA6 249 aa9.36□□□□□ -0.91
CASC4-206ENST00000558847 SLC10A3P09131 477 aa9.36□□□□□ -0.91
CASC4-206ENST00000558847 NR1I2O75469 434 aa9.35□□□□□ -0.91
CASC4-206ENST00000558847 SLC19A1P41440 591 aa9.35□□□□□ -0.91
CASC4-206ENST00000558847 CCDC102AQ96A19 550 aa9.35□□□□□ -0.91
CASC4-206ENST00000558847 IRF6O14896 467 aa9.34□□□□□ -0.91
CASC4-206ENST00000558847 S1PR4O95977 384 aa9.34□□□□□ -0.91
CASC4-206ENST00000558847 METTL3Q86U44 580 aaKnown RBP9.34□□□□□ -0.91
CASC4-206ENST00000558847 MINK1Q8N4C8 1332 aaPredicted RBP9.33□□□□□ -0.92
CASC4-206ENST00000558847 PPEF1O14829 653 aaPredicted RBP9.33□□□□□ -0.92
CASC4-206ENST00000558847 RDH13Q8NBN7 331 aa9.33□□□□□ -0.92
CASC4-206ENST00000558847 PHOX2BQ99453 314 aa9.33□□□□□ -0.92
CASC4-206ENST00000558847 ADH1BP00325 375 aa9.31□□□□□ -0.92
CASC4-206ENST00000558847 PUS10Q3MIT2 529 aaKnown RBP9.31□□□□□ -0.92
CASC4-206ENST00000558847 ANKLE1Q8NAG6 615 aa9.31□□□□□ -0.92
CASC4-206ENST00000558847 LCE2BO14633 110 aa9.3□□□□□ -0.92
CASC4-206ENST00000558847 SLC6A16Q9GZN6 736 aa9.3□□□□□ -0.92
CASC4-206ENST00000558847 DDX11L8A8MPP1 907 aa9.29□□□□□ -0.92
CASC4-206ENST00000558847 SCUBE3Q8IX30 993 aa9.29□□□□□ -0.92
CASC4-206ENST00000558847 SPRYD7Q5W111 196 aa9.28□□□□□ -0.92
CASC4-206ENST00000558847 NLRP7Q8WX94 980 aa9.28□□□□□ -0.92
CASC4-206ENST00000558847 SLC24A3Q9HC58 644 aa9.28□□□□□ -0.92
CASC4-206ENST00000558847 DAXXQ9UER7 740 aaPredicted RBP9.28□□□□□ -0.92
CASC4-206ENST00000558847 ZNF598Q86UK7 904 aaKnown RBP9.26□□□□□ -0.93
CASC4-206ENST00000558847 KRI1Q8N9T8 703 aaKnown RBP9.26□□□□□ -0.93
CASC4-206ENST00000558847 SPSB2Q99619 263 aa9.26□□□□□ -0.93
CASC4-206ENST00000558847 ZNF697Q5TEC3 545 aa9.25□□□□□ -0.93
CASC4-206ENST00000558847 LIAT1Q6ZQX7 453 aa9.25□□□□□ -0.93
CASC4-206ENST00000558847 EMID1Q96A84 441 aaPredicted RBP9.25□□□□□ -0.93
CASC4-206ENST00000558847 AK7Q96M32 723 aa9.25□□□□□ -0.93
CASC4-206ENST00000558847 AMHR2Q16671 573 aa9.24□□□□□ -0.93
CASC4-206ENST00000558847 PKDCCQ504Y2 493 aa9.24□□□□□ -0.93
CASC4-206ENST00000558847 SULF1Q8IWU6 871 aa9.24□□□□□ -0.93
CASC4-206ENST00000558847 TRIM66O15016 1216 aa9.23□□□□□ -0.93
CASC4-206ENST00000558847 FUT2Q10981 343 aa9.23□□□□□ -0.93
CASC4-206ENST00000558847 ZNF787Q6DD87 383 aa9.23□□□□□ -0.93
CASC4-206ENST00000558847 ATP6V1AP38606 617 aa9.22□□□□□ -0.93
CASC4-206ENST00000558847 TRIM67Q6ZTA4 783 aa9.22□□□□□ -0.93
CASC4-206ENST00000558847 TNFRSF10AO00220 468 aa9.21□□□□□ -0.94
CASC4-206ENST00000558847 MDM2Q00987 491 aaPredicted RBP9.2□□□□□ -0.94
CASC4-206ENST00000558847 MORN1Q5T089 497 aa9.2□□□□□ -0.94
CASC4-206ENST00000558847 FAM187AA6NFU0 413 aa9.19□□□□□ -0.94
CASC4-206ENST00000558847 FMNL1O95466 1100 aaPredicted RBP9.19□□□□□ -0.94
CASC4-206ENST00000558847 GCGRP47871 477 aa9.19□□□□□ -0.94
CASC4-206ENST00000558847 TMEM132AQ24JP5 1023 aa9.19□□□□□ -0.94
CASC4-206ENST00000558847 PLA2G2CQ5R387 149 aa9.19□□□□□ -0.94
CASC4-206ENST00000558847 REPIN1Q9BWE0 567 aaKnown RBP9.19□□□□□ -0.94
CASC4-206ENST00000558847 DGAT1O75907 488 aa9.18□□□□□ -0.94
CASC4-206ENST00000558847 PRR20EP86478 221 aa9.18□□□□□ -0.94
CASC4-206ENST00000558847 PRR20CP86479 221 aa9.18□□□□□ -0.94
CASC4-206ENST00000558847 PRR20DP86480 221 aa9.18□□□□□ -0.94
CASC4-206ENST00000558847 PRR20BP86481 221 aa9.18□□□□□ -0.94
CASC4-206ENST00000558847 PRR20AP86496 221 aa9.18□□□□□ -0.94
CASC4-206ENST00000558847 FOXC1Q12948 553 aa9.18□□□□□ -0.94
CASC4-206ENST00000558847 PARP9Q8IXQ6 854 aa9.18□□□□□ -0.94
CASC4-206ENST00000558847 SLC27A5Q9Y2P5 690 aa9.18□□□□□ -0.94
CASC4-206ENST00000558847 CLCN1P35523 988 aa9.17□□□□□ -0.94
CASC4-206ENST00000558847 GRIPAP1Q4V328 841 aa9.17□□□□□ -0.94
CASC4-206ENST00000558847 ERICH6Q7L0X2 663 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms