RNA–Protein interactions for RNA: ENST00000558560.1

RMDN3-206, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-206ENST00000558560 ZFYVE9O95405 1425 aa28.57■■■□□ 2.16
RMDN3-206ENST00000558560 TMEM131LA2VDJ0 1609 aa28.57■■■□□ 2.16
RMDN3-206ENST00000558560 TMEM94Q12767 1356 aa28.56■■■□□ 2.16
RMDN3-206ENST00000558560 SLC26A8Q96RN1 970 aa28.56■■■□□ 2.16
RMDN3-206ENST00000558560 IQGAP3Q86VI3 1631 aa28.55■■■□□ 2.16
RMDN3-206ENST00000558560 PLEKHG1Q9ULL1 1385 aa28.55■■■□□ 2.16
RMDN3-206ENST00000558560 E9PCH4 1651 aa28.53■■■□□ 2.16
RMDN3-206ENST00000558560 CHD2O14647 1828 aaKnown RBP28.53■■■□□ 2.16
RMDN3-206ENST00000558560 PROSER2Q86WR7 435 aaPredicted RBP28.52■■■□□ 2.16
RMDN3-206ENST00000558560 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.52■■■□□ 2.16
RMDN3-206ENST00000558560 RIMS2Q9UQ26 1411 aa28.51■■■□□ 2.15
RMDN3-206ENST00000558560 PHF23Q9BUL5 403 aaPredicted RBP28.5■■■□□ 2.15
RMDN3-206ENST00000558560 BCANQ96GW7 911 aa28.48■■■□□ 2.15
RMDN3-206ENST00000558560 TBX22Q9Y458 520 aa28.48■■■□□ 2.15
RMDN3-206ENST00000558560 PPP1R15AO75807 674 aaPredicted RBP28.46■■■□□ 2.15
RMDN3-206ENST00000558560 NCOA3Q9Y6Q9 1424 aa28.45■■■□□ 2.15
RMDN3-206ENST00000558560 MSH6P52701 1360 aa28.44■■■□□ 2.14
RMDN3-206ENST00000558560 DIP2AQ14689 1571 aa28.43■■■□□ 2.14
RMDN3-206ENST00000558560 NUP155O75694 1391 aa28.43■■■□□ 2.14
RMDN3-206ENST00000558560 PIK3R4Q99570 1358 aa28.42■■■□□ 2.14
RMDN3-206ENST00000558560 ROBO1Q9Y6N7 1651 aa28.42■■■□□ 2.14
RMDN3-206ENST00000558560 SENP3Q9H4L4 574 aaPredicted RBP28.38■■■□□ 2.13
RMDN3-206ENST00000558560 CHGAP10645 457 aaKnown RBP28.37■■■□□ 2.13
RMDN3-206ENST00000558560 ADAMTS13Q76LX8 1427 aa28.35■■■□□ 2.13
RMDN3-206ENST00000558560 SLAIN2Q9P270 581 aa28.35■■■□□ 2.13
RMDN3-206ENST00000558560 RBM33Q96EV2 1170 aaKnown RBP28.33■■■□□ 2.13
RMDN3-206ENST00000558560 SPHKAPQ2M3C7 1700 aa28.32■■■□□ 2.12
RMDN3-206ENST00000558560 ITGAEP38570 1179 aa28.31■■■□□ 2.12
RMDN3-206ENST00000558560 TRPM2O94759 1503 aa28.3■■■□□ 2.12
RMDN3-206ENST00000558560 RRBP1Q9P2E9 1410 aaKnown RBP28.27■■■□□ 2.12
RMDN3-206ENST00000558560 PHLPP1O60346 1717 aa28.27■■■□□ 2.12
RMDN3-206ENST00000558560 C19orf44Q9H6X5 657 aa28.26■■■□□ 2.11
RMDN3-206ENST00000558560 RGS17Q9UGC6 210 aaPredicted RBP28.26■■■□□ 2.11
RMDN3-206ENST00000558560 CADPS2Q86UW7 1296 aa28.25■■■□□ 2.11
RMDN3-206ENST00000558560 SETBP1Q9Y6X0 1596 aa28.24■■■□□ 2.11
RMDN3-206ENST00000558560 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.23■■■□□ 2.11
RMDN3-206ENST00000558560 NUTM2DQ5VT03 806 aaPredicted RBP28.22■■■□□ 2.11
RMDN3-206ENST00000558560 JCADQ9P266 1359 aa28.22■■■□□ 2.11
RMDN3-206ENST00000558560 C14orf37Q86TY3 774 aa28.2■■■□□ 2.1
RMDN3-206ENST00000558560 AMOTL2Q9Y2J4 779 aa28.2■■■□□ 2.1
RMDN3-206ENST00000558560 NRXN3Q9Y4C0 1643 aa28.19■■■□□ 2.1
RMDN3-206ENST00000558560 PPARGC1BQ86YN6 1023 aaKnown RBP28.19■■■□□ 2.1
RMDN3-206ENST00000558560 DCCP43146 1447 aa28.18■■■□□ 2.1
RMDN3-206ENST00000558560 ATF3P18847 181 aa28.18■■■□□ 2.1
RMDN3-206ENST00000558560 NAIPQ13075 1403 aa28.18■■■□□ 2.1
RMDN3-206ENST00000558560 KIF1BO60333 1816 aa28.17■■■□□ 2.1
RMDN3-206ENST00000558560 XRN1Q8IZH2 1706 aaKnown RBP28.17■■■□□ 2.1
RMDN3-206ENST00000558560 COL16A1Q07092 1604 aaPredicted RBP28.17■■■□□ 2.1
RMDN3-206ENST00000558560 PTPRUQ92729 1446 aa28.17■■■□□ 2.1
RMDN3-206ENST00000558560 AHDC1Q5TGY3 1603 aaPredicted RBP28.15■■■□□ 2.1
RMDN3-206ENST00000558560 ZNF326Q5BKZ1 582 aaKnown RBP28.13■■■□□ 2.09
RMDN3-206ENST00000558560 CLTCL1P53675 1640 aa28.13■■■□□ 2.09
RMDN3-206ENST00000558560 NEXMIFQ5QGS0 1516 aa28.11■■■□□ 2.09
RMDN3-206ENST00000558560 SPATA31A6Q5VVP1 1343 aa28.11■■■□□ 2.09
RMDN3-206ENST00000558560 HFM1A2PYH4 1435 aa28.09■■■□□ 2.09
RMDN3-206ENST00000558560 SHPRHQ149N8 1683 aa28.08■■■□□ 2.09
RMDN3-206ENST00000558560 POTEAQ6S8J7 498 aa28.08■■■□□ 2.09
RMDN3-206ENST00000558560 METP08581 1390 aa28.05■■■□□ 2.08
RMDN3-206ENST00000558560 BRINP3Q76B58 766 aa28.03■■■□□ 2.08
RMDN3-206ENST00000558560 RPGRIP1LQ68CZ1 1315 aa28.02■■■□□ 2.08
RMDN3-206ENST00000558560 VGFO15240 615 aaPredicted RBP28.02■■■□□ 2.08
RMDN3-206ENST00000558560 ADGRL3Q9HAR2 1447 aa28■■■□□ 2.07
RMDN3-206ENST00000558560 MST1RQ04912 1400 aa27.99■■■□□ 2.07
RMDN3-206ENST00000558560 ASXL1Q8IXJ9 1541 aa27.98■■■□□ 2.07
RMDN3-206ENST00000558560 TRIM52Q96A61 297 aa27.98■■■□□ 2.07
RMDN3-206ENST00000558560 NHSL1Q5SYE7 1610 aa27.97■■■□□ 2.07
RMDN3-206ENST00000558560 PRAG1Q86YV5 1406 aa27.97■■■□□ 2.07
RMDN3-206ENST00000558560 SETD5Q9C0A6 1442 aa27.96■■■□□ 2.07
RMDN3-206ENST00000558560 SLC4A1APQ9BWU0 796 aaKnown RBP27.96■■■□□ 2.07
RMDN3-206ENST00000558560 SETD1AO15047 1707 aaKnown RBP27.95■■■□□ 2.07
RMDN3-206ENST00000558560 PTCH1Q13635 1447 aa27.95■■■□□ 2.07
RMDN3-206ENST00000558560 ZNF772Q68DY9 489 aaPredicted RBP27.95■■■□□ 2.06
RMDN3-206ENST00000558560 LRP6O75581 1613 aa27.95■■■□□ 2.06
RMDN3-206ENST00000558560 NALCNQ8IZF0 1738 aa27.93■■■□□ 2.06
RMDN3-206ENST00000558560 PPLO60437 1756 aa27.93■■■□□ 2.06
RMDN3-206ENST00000558560 MEX3CQ5U5Q3 659 aaKnown RBP27.92■■■□□ 2.06
RMDN3-206ENST00000558560 LRRC59Q96AG4 307 aaKnown RBP27.91■■■□□ 2.06
RMDN3-206ENST00000558560 ACIN1Q9UKV3 1341 aaKnown RBP27.89■■■□□ 2.05
RMDN3-206ENST00000558560 LAMC1P11047 1609 aa27.88■■■□□ 2.05
RMDN3-206ENST00000558560 C1orf167Q5SNV9 1468 aa27.83■■■□□ 2.05
RMDN3-206ENST00000558560 ROBO2Q9HCK4 1378 aa27.83■■■□□ 2.05
RMDN3-206ENST00000558560 CCDC144AA2RUR9 1427 aa27.8■■■□□ 2.04
RMDN3-206ENST00000558560 CDK12Q9NYV4 1490 aaPredicted RBP27.78■■■□□ 2.04
RMDN3-206ENST00000558560 PNPLA6Q8IY17 1366 aa27.78■■■□□ 2.04
RMDN3-206ENST00000558560 ANKRD30BQ9BXX2 1392 aa27.77■■■□□ 2.04
RMDN3-206ENST00000558560 NUTM2BA6NNL0 878 aaPredicted RBP27.77■■■□□ 2.04
RMDN3-206ENST00000558560 NUTM2EB1AL46 878 aaPredicted RBP27.77■■■□□ 2.04
RMDN3-206ENST00000558560 NUTM2AQ8IVF1 878 aaPredicted RBP27.77■■■□□ 2.04
RMDN3-206ENST00000558560 RXRBP28702 533 aa27.76■■■□□ 2.03
RMDN3-206ENST00000558560 SPATA31E1Q6ZUB1 1445 aa27.75■■■□□ 2.03
RMDN3-206ENST00000558560 IFT172Q9UG01 1749 aa27.75■■■□□ 2.03
RMDN3-206ENST00000558560 MPHOSPH9Q99550 1183 aa27.75■■■□□ 2.03
RMDN3-206ENST00000558560 SOS2Q07890 1332 aaPredicted RBP27.74■■■□□ 2.03
RMDN3-206ENST00000558560 CDC42BPGQ6DT37 1551 aa27.73■■■□□ 2.03
RMDN3-206ENST00000558560 TECPR2O15040 1411 aa27.72■■■□□ 2.03
RMDN3-206ENST00000558560 AFF2P51816 1311 aa27.71■■■□□ 2.03
RMDN3-206ENST00000558560 FOXD1Q16676 465 aa27.71■■■□□ 2.03
RMDN3-206ENST00000558560 DDX17Q92841 729 aaKnown RBP27.7■■■□□ 2.02
RMDN3-206ENST00000558560 ADGRF5Q8IZF2 1346 aa27.69■■■□□ 2.02
RMDN3-206ENST00000558560 ORAI2Q96SN7 254 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms