RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 ADGRL2O95490 1459 aa17.25■□□□□ 0.35
RABGGTA-204ENST00000558376 BCANQ96GW7 911 aa17.24■□□□□ 0.35
RABGGTA-204ENST00000558376 NKTRP30414 1462 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-204ENST00000558376 CHD2O14647 1828 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-204ENST00000558376 ZFYVE9O95405 1425 aa17.22■□□□□ 0.35
RABGGTA-204ENST00000558376 PPARGC1BQ86YN6 1023 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-204ENST00000558376 SLAIN2Q9P270 581 aa17.22■□□□□ 0.35
RABGGTA-204ENST00000558376 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-204ENST00000558376 MSH6P52701 1360 aa17.21■□□□□ 0.35
RABGGTA-204ENST00000558376 ANKRD50Q9ULJ7 1429 aa17.21■□□□□ 0.34
RABGGTA-204ENST00000558376 RPRD2Q5VT52 1461 aaKnown RBP17.2■□□□□ 0.34
RABGGTA-204ENST00000558376 PLEKHG1Q9ULL1 1385 aa17.2■□□□□ 0.34
RABGGTA-204ENST00000558376 RIMS2Q9UQ26 1411 aa17.2■□□□□ 0.34
RABGGTA-204ENST00000558376 GCC2Q8IWJ2 1684 aa17.2■□□□□ 0.34
RABGGTA-204ENST00000558376 PHLPP1O60346 1717 aa17.19■□□□□ 0.34
RABGGTA-204ENST00000558376 TMEM131LA2VDJ0 1609 aa17.19■□□□□ 0.34
RABGGTA-204ENST00000558376 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
RABGGTA-204ENST00000558376 TBX22Q9Y458 520 aa17.17■□□□□ 0.34
RABGGTA-204ENST00000558376 JCADQ9P266 1359 aa17.15■□□□□ 0.34
RABGGTA-204ENST00000558376 HDGFP51858 240 aaKnown RBP17.15■□□□□ 0.34
RABGGTA-204ENST00000558376 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
RABGGTA-204ENST00000558376 CHGAP10645 457 aaKnown RBP17.14■□□□□ 0.33
RABGGTA-204ENST00000558376 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
RABGGTA-204ENST00000558376 COL16A1Q07092 1604 aaPredicted RBP17.13■□□□□ 0.33
RABGGTA-204ENST00000558376 UNC13BO14795 1591 aa17.13■□□□□ 0.33
RABGGTA-204ENST00000558376 SETD1AO15047 1707 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-204ENST00000558376 E9PCH4 1651 aa17.12■□□□□ 0.33
RABGGTA-204ENST00000558376 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.12■□□□□ 0.33
RABGGTA-204ENST00000558376 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.11■□□□□ 0.33
RABGGTA-204ENST00000558376 NCOA3Q9Y6Q9 1424 aa17.11■□□□□ 0.33
RABGGTA-204ENST00000558376 C14orf37Q86TY3 774 aa17.1■□□□□ 0.33
RABGGTA-204ENST00000558376 LRP6O75581 1613 aa17.09■□□□□ 0.33
RABGGTA-204ENST00000558376 C19orf44Q9H6X5 657 aa17.08■□□□□ 0.33
RABGGTA-204ENST00000558376 CADPS2Q86UW7 1296 aa17.07■□□□□ 0.32
RABGGTA-204ENST00000558376 PTPRUQ92729 1446 aa17.07■□□□□ 0.32
RABGGTA-204ENST00000558376 IQGAP3Q86VI3 1631 aa17.06■□□□□ 0.32
RABGGTA-204ENST00000558376 PIK3R4Q99570 1358 aa17.06■□□□□ 0.32
RABGGTA-204ENST00000558376 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
RABGGTA-204ENST00000558376 AHDC1Q5TGY3 1603 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-204ENST00000558376 ATF3P18847 181 aa17.05■□□□□ 0.32
RABGGTA-204ENST00000558376 AMOTL2Q9Y2J4 779 aa17.05■□□□□ 0.32
RABGGTA-204ENST00000558376 SPATA31A6Q5VVP1 1343 aa17.05■□□□□ 0.32
RABGGTA-204ENST00000558376 ROCK1Q13464 1354 aa17.04■□□□□ 0.32
RABGGTA-204ENST00000558376 NUP155O75694 1391 aa17.03■□□□□ 0.32
RABGGTA-204ENST00000558376 SHPRHQ149N8 1683 aa17.03■□□□□ 0.32
RABGGTA-204ENST00000558376 MEX3CQ5U5Q3 659 aaKnown RBP17.03■□□□□ 0.32
RABGGTA-204ENST00000558376 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
RABGGTA-204ENST00000558376 TRPM2O94759 1503 aa17.02■□□□□ 0.32
RABGGTA-204ENST00000558376 PCGF6Q9BYE7 350 aa17.02■□□□□ 0.32
RABGGTA-204ENST00000558376 ZNF772Q68DY9 489 aaPredicted RBP17.01■□□□□ 0.31
RABGGTA-204ENST00000558376 TRIM52Q96A61 297 aa17■□□□□ 0.31
RABGGTA-204ENST00000558376 NRXN3Q9Y4C0 1643 aa17■□□□□ 0.31
RABGGTA-204ENST00000558376 ITGAEP38570 1179 aa16.99■□□□□ 0.31
RABGGTA-204ENST00000558376 UPF1Q92900 1129 aaKnown RBP eCLIP16.99■□□□□ 0.31
RABGGTA-204ENST00000558376 NUTM2BA6NNL0 878 aaPredicted RBP16.98■□□□□ 0.31
RABGGTA-204ENST00000558376 NUTM2EB1AL46 878 aaPredicted RBP16.98■□□□□ 0.31
RABGGTA-204ENST00000558376 NUTM2AQ8IVF1 878 aaPredicted RBP16.98■□□□□ 0.31
RABGGTA-204ENST00000558376 XRN1Q8IZH2 1706 aaKnown RBP16.98■□□□□ 0.31
RABGGTA-204ENST00000558376 METP08581 1390 aa16.96■□□□□ 0.3
RABGGTA-204ENST00000558376 SETBP1Q9Y6X0 1596 aa16.95■□□□□ 0.3
RABGGTA-204ENST00000558376 ASXL1Q8IXJ9 1541 aa16.95■□□□□ 0.3
RABGGTA-204ENST00000558376 SPHKAPQ2M3C7 1700 aa16.95■□□□□ 0.3
RABGGTA-204ENST00000558376 DCCP43146 1447 aa16.95■□□□□ 0.3
RABGGTA-204ENST00000558376 MST1RQ04912 1400 aa16.95■□□□□ 0.3
RABGGTA-204ENST00000558376 RXRBP28702 533 aa16.95■□□□□ 0.3
RABGGTA-204ENST00000558376 ZNF326Q5BKZ1 582 aaKnown RBP16.94■□□□□ 0.3
RABGGTA-204ENST00000558376 SETD5Q9C0A6 1442 aa16.93■□□□□ 0.3
RABGGTA-204ENST00000558376 DDX17Q92841 729 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-204ENST00000558376 NHSL1Q5SYE7 1610 aa16.93■□□□□ 0.3
RABGGTA-204ENST00000558376 TRIM26Q12899 539 aaPredicted RBP16.93■□□□□ 0.3
RABGGTA-204ENST00000558376 AFF2P51816 1311 aa16.92■□□□□ 0.3
RABGGTA-204ENST00000558376 LRRC59Q96AG4 307 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-204ENST00000558376 CLTCL1P53675 1640 aa16.89■□□□□ 0.29
RABGGTA-204ENST00000558376 ADGRL3Q9HAR2 1447 aa16.89■□□□□ 0.29
RABGGTA-204ENST00000558376 CDK12Q9NYV4 1490 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-204ENST00000558376 NEXMIFQ5QGS0 1516 aa16.89■□□□□ 0.29
RABGGTA-204ENST00000558376 NALCNQ8IZF0 1738 aa16.88■□□□□ 0.29
RABGGTA-204ENST00000558376 PNPLA6Q8IY17 1366 aa16.87■□□□□ 0.29
RABGGTA-204ENST00000558376 C8orf37Q96NL8 207 aa16.86■□□□□ 0.29
RABGGTA-204ENST00000558376 QTRT2Q9H974 415 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-204ENST00000558376 KIF1BO60333 1816 aa16.85■□□□□ 0.29
RABGGTA-204ENST00000558376 C1orf167Q5SNV9 1468 aa16.83■□□□□ 0.29
RABGGTA-204ENST00000558376 RGS12O14924 1447 aa16.83■□□□□ 0.28
RABGGTA-204ENST00000558376 RBM6P78332 1123 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-204ENST00000558376 ADAMTS2O95450 1211 aa16.82■□□□□ 0.28
RABGGTA-204ENST00000558376 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
RABGGTA-204ENST00000558376 ROBO2Q9HCK4 1378 aa16.81■□□□□ 0.28
RABGGTA-204ENST00000558376 LAMC1P11047 1609 aa16.81■□□□□ 0.28
RABGGTA-204ENST00000558376 NGLY1Q96IV0 654 aa16.8■□□□□ 0.28
RABGGTA-204ENST00000558376 NAIPQ13075 1403 aa16.79■□□□□ 0.28
RABGGTA-204ENST00000558376 SOS2Q07890 1332 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-204ENST00000558376 VGFO15240 615 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-204ENST00000558376 PTCH1Q13635 1447 aa16.78■□□□□ 0.28
RABGGTA-204ENST00000558376 PRAG1Q86YV5 1406 aa16.74■□□□□ 0.27
RABGGTA-204ENST00000558376 RRBP1Q9P2E9 1410 aaKnown RBP16.74■□□□□ 0.27
RABGGTA-204ENST00000558376 RPGRIP1LQ68CZ1 1315 aa16.74■□□□□ 0.27
RABGGTA-204ENST00000558376 USP21Q9UK80 565 aa16.73■□□□□ 0.27
RABGGTA-204ENST00000558376 PPLO60437 1756 aa16.73■□□□□ 0.27
RABGGTA-204ENST00000558376 FNBP4Q8N3X1 1017 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-204ENST00000558376 TRPC5Q9UL62 973 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms