RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 RIMS2Q9UQ26 1411 aa15.37■□□□□ 0.05
TPM1-212ENST00000558347 ALKQ9UM73 1620 aa15.36■□□□□ 0.05
TPM1-212ENST00000558347 CHGAP10645 457 aaKnown RBP15.35■□□□□ 0.05
TPM1-212ENST00000558347 SLC26A8Q96RN1 970 aa15.35■□□□□ 0.05
TPM1-212ENST00000558347 XIRP1Q702N8 1843 aaKnown RBP15.34■□□□□ 0.05
TPM1-212ENST00000558347 SENP3Q9H4L4 574 aaPredicted RBP15.34■□□□□ 0.05
TPM1-212ENST00000558347 PLEKHG1Q9ULL1 1385 aa15.33■□□□□ 0.04
TPM1-212ENST00000558347 TOM1O60784 492 aa15.33■□□□□ 0.04
TPM1-212ENST00000558347 PIP4K2BP78356 416 aa15.33■□□□□ 0.04
TPM1-212ENST00000558347 NUTM2DQ5VT03 806 aaPredicted RBP15.32■□□□□ 0.04
TPM1-212ENST00000558347 SCAF1Q9H7N4 1312 aaKnown RBP15.31■□□□□ 0.04
TPM1-212ENST00000558347 PPP1R15AO75807 674 aaPredicted RBP15.31■□□□□ 0.04
TPM1-212ENST00000558347 CLTCL1P53675 1640 aa15.3■□□□□ 0.04
TPM1-212ENST00000558347 NWD1Q149M9 1564 aa15.3■□□□□ 0.04
TPM1-212ENST00000558347 TRPM2O94759 1503 aa15.3■□□□□ 0.04
TPM1-212ENST00000558347 KCNA6P17658 529 aa15.3■□□□□ 0.04
TPM1-212ENST00000558347 TRIM52Q96A61 297 aa15.3■□□□□ 0.04
TPM1-212ENST00000558347 BCANQ96GW7 911 aa15.3■□□□□ 0.04
TPM1-212ENST00000558347 HDGFP51858 240 aaKnown RBP15.29■□□□□ 0.04
TPM1-212ENST00000558347 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.28■□□□□ 0.04
TPM1-212ENST00000558347 ADAMTS13Q76LX8 1427 aa15.28■□□□□ 0.04
TPM1-212ENST00000558347 CHD2O14647 1828 aaKnown RBP15.27■□□□□ 0.03
TPM1-212ENST00000558347 TMEM94Q12767 1356 aa15.26■□□□□ 0.03
TPM1-212ENST00000558347 HSPA1LP34931 641 aa15.26■□□□□ 0.03
TPM1-212ENST00000558347 RBM33Q96EV2 1170 aaKnown RBP15.26■□□□□ 0.03
TPM1-212ENST00000558347 NKTRP30414 1462 aaKnown RBP15.26■□□□□ 0.03
TPM1-212ENST00000558347 SLC4A1APQ9BWU0 796 aaKnown RBP15.25■□□□□ 0.03
TPM1-212ENST00000558347 TBX22Q9Y458 520 aa15.25■□□□□ 0.03
TPM1-212ENST00000558347 KIF1BO60333 1816 aa15.25■□□□□ 0.03
TPM1-212ENST00000558347 DIP2AQ14689 1571 aa15.24■□□□□ 0.03
TPM1-212ENST00000558347 PROSER2Q86WR7 435 aaPredicted RBP15.24■□□□□ 0.03
TPM1-212ENST00000558347 NRXN3Q9Y4C0 1643 aa15.24■□□□□ 0.03
TPM1-212ENST00000558347 ZNF326Q5BKZ1 582 aaKnown RBP15.23■□□□□ 0.03
TPM1-212ENST00000558347 NEXMIFQ5QGS0 1516 aa15.22■□□□□ 0.03
TPM1-212ENST00000558347 DISP3Q9P2K9 1392 aa15.22■□□□□ 0.03
TPM1-212ENST00000558347 FOXD1Q16676 465 aa15.21■□□□□ 0.03
TPM1-212ENST00000558347 SETBP1Q9Y6X0 1596 aa15.21■□□□□ 0.03
TPM1-212ENST00000558347 PTPRUQ92729 1446 aa15.19■□□□□ 0.02
TPM1-212ENST00000558347 PIK3R4Q99570 1358 aa15.19■□□□□ 0.02
TPM1-212ENST00000558347 SETD5Q9C0A6 1442 aa15.18■□□□□ 0.02
TPM1-212ENST00000558347 MPHOSPH9Q99550 1183 aa15.17■□□□□ 0.02
TPM1-212ENST00000558347 XRN1Q8IZH2 1706 aaKnown RBP15.16■□□□□ 0.02
TPM1-212ENST00000558347 METP08581 1390 aa15.16■□□□□ 0.02
TPM1-212ENST00000558347 MSH6P52701 1360 aa15.16■□□□□ 0.02
TPM1-212ENST00000558347 ROBO1Q9Y6N7 1651 aa15.15■□□□□ 0.02
TPM1-212ENST00000558347 AMOTL2Q9Y2J4 779 aa15.15■□□□□ 0.02
TPM1-212ENST00000558347 FAM135BQ49AJ0 1406 aa15.15■□□□□ 0.02
TPM1-212ENST00000558347 PPLO60437 1756 aa15.15■□□□□ 0.02
TPM1-212ENST00000558347 NCOA3Q9Y6Q9 1424 aa15.14■□□□□ 0.01
TPM1-212ENST00000558347 MED1Q15648 1581 aaPredicted RBP15.13■□□□□ 0.01
TPM1-212ENST00000558347 RAB3GAP2Q9H2M9 1393 aa15.13■□□□□ 0.01
TPM1-212ENST00000558347 SETD1AO15047 1707 aaKnown RBP15.13■□□□□ 0.01
TPM1-212ENST00000558347 CCDC144AA2RUR9 1427 aa15.13■□□□□ 0.01
TPM1-212ENST00000558347 ILDR2Q71H61 639 aa15.12■□□□□ 0.01
TPM1-212ENST00000558347 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.12■□□□□ 0.01
TPM1-212ENST00000558347 RPGRIP1LQ68CZ1 1315 aa15.11■□□□□ 0.01
TPM1-212ENST00000558347 VGFO15240 615 aaPredicted RBP15.11■□□□□ 0.01
TPM1-212ENST00000558347 C14orf37Q86TY3 774 aa15.1■□□□□ 0.01
TPM1-212ENST00000558347 SLAIN2Q9P270 581 aa15.1■□□□□ 0.01
TPM1-212ENST00000558347 SPATA31E1Q6ZUB1 1445 aa15.1■□□□□ 0.01
TPM1-212ENST00000558347 ACIN1Q9UKV3 1341 aaKnown RBP15.08■□□□□ 0.01
TPM1-212ENST00000558347 IFT172Q9UG01 1749 aa15.08■□□□□ 0.01
TPM1-212ENST00000558347 C19orf44Q9H6X5 657 aa15.08■□□□□ 0.01
TPM1-212ENST00000558347 RGL3Q3MIN7 710 aa15.07■□□□□ 0
TPM1-212ENST00000558347 CADPS2Q86UW7 1296 aa15.06■□□□□ 0
TPM1-212ENST00000558347 PHLPP1O60346 1717 aa15.05■□□□□ 0
TPM1-212ENST00000558347 ADGRF5Q8IZF2 1346 aa15.05■□□□□ 0
TPM1-212ENST00000558347 ATF3P18847 181 aa15.05■□□□□ -0
TPM1-212ENST00000558347 NALCNQ8IZF0 1738 aa15.05■□□□□ -0
TPM1-212ENST00000558347 DCCP43146 1447 aa15.04■□□□□ -0
TPM1-212ENST00000558347 PTCH1Q13635 1447 aa15.03■□□□□ -0
TPM1-212ENST00000558347 ADGRL3Q9HAR2 1447 aa15.03■□□□□ -0
TPM1-212ENST00000558347 ANKRD30BQ9BXX2 1392 aa15.02■□□□□ -0
TPM1-212ENST00000558347 CCER1Q8TC90 406 aaPredicted RBP15.02■□□□□ -0
TPM1-212ENST00000558347 ROBO2Q9HCK4 1378 aa15.02□□□□□ -0.01
TPM1-212ENST00000558347 COL16A1Q07092 1604 aaPredicted RBP15.02□□□□□ -0.01
TPM1-212ENST00000558347 MST1RQ04912 1400 aa15.01□□□□□ -0.01
TPM1-212ENST00000558347 PRAG1Q86YV5 1406 aa15.01□□□□□ -0.01
TPM1-212ENST00000558347 ASXL1Q8IXJ9 1541 aa15□□□□□ -0.01
TPM1-212ENST00000558347 BRINP3Q76B58 766 aa15□□□□□ -0.01
TPM1-212ENST00000558347 PIK3C2GO75747 1445 aa15□□□□□ -0.01
TPM1-212ENST00000558347 AHDC1Q5TGY3 1603 aaPredicted RBP15□□□□□ -0.01
TPM1-212ENST00000558347 PHF23Q9BUL5 403 aaPredicted RBP14.97□□□□□ -0.01
TPM1-212ENST00000558347 NRXN1Q9ULB1 1477 aa14.97□□□□□ -0.01
TPM1-212ENST00000558347 JCADQ9P266 1359 aa14.96□□□□□ -0.01
TPM1-212ENST00000558347 MYOM2P54296 1465 aa14.96□□□□□ -0.01
TPM1-212ENST00000558347 TMEM132EQ6IEE7 984 aa14.96□□□□□ -0.02
TPM1-212ENST00000558347 NHSL1Q5SYE7 1610 aa14.96□□□□□ -0.02
TPM1-212ENST00000558347 SOCS7O14512 581 aa14.95□□□□□ -0.02
TPM1-212ENST00000558347 KNDC1Q76NI1 1749 aa14.95□□□□□ -0.02
TPM1-212ENST00000558347 TECPR2O15040 1411 aa14.95□□□□□ -0.02
TPM1-212ENST00000558347 STK26Q9P289 416 aa14.94□□□□□ -0.02
TPM1-212ENST00000558347 RGS17Q9UGC6 210 aaPredicted RBP14.94□□□□□ -0.02
TPM1-212ENST00000558347 LRPPRCP42704 1394 aaKnown RBP14.94□□□□□ -0.02
TPM1-212ENST00000558347 C1orf167Q5SNV9 1468 aa14.94□□□□□ -0.02
TPM1-212ENST00000558347 SHPRHQ149N8 1683 aa14.92□□□□□ -0.02
TPM1-212ENST00000558347 YTHDC2Q9H6S0 1430 aaKnown RBP14.92□□□□□ -0.02
TPM1-212ENST00000558347 C14orf93Q9H972 538 aaKnown RBP14.92□□□□□ -0.02
TPM1-212ENST00000558347 LAMC1P11047 1609 aa14.92□□□□□ -0.02
TPM1-212ENST00000558347 ABCC11Q96J66 1382 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms