RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 LRCH3Q96II8 777 aa5.94□□□□□ -1.46
HMGB1P14-201ENST00000557424 TSKSQ9UJT2 592 aa5.94□□□□□ -1.46
HMGB1P14-201ENST00000557424 RCCD1A6NED2 376 aa5.93□□□□□ -1.46
HMGB1P14-201ENST00000557424 PROX2Q3B8N5 592 aa5.93□□□□□ -1.46
HMGB1P14-201ENST00000557424 ANKRD13DQ6ZTN6 518 aa5.93□□□□□ -1.46
HMGB1P14-201ENST00000557424 NYAP1Q6ZVC0 841 aa5.93□□□□□ -1.46
HMGB1P14-201ENST00000557424 ERICH6Q7L0X2 663 aa5.93□□□□□ -1.46
HMGB1P14-201ENST00000557424 TMEM134Q9H6X4 195 aa5.93□□□□□ -1.46
HMGB1P14-201ENST00000557424 MDM2Q00987 491 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P14-201ENST00000557424 KMT5BQ4FZB7 885 aa5.92□□□□□ -1.46
HMGB1P14-201ENST00000557424 GIGYF2Q6Y7W6 1299 aaKnown RBP5.92□□□□□ -1.46
HMGB1P14-201ENST00000557424 EYA1Q99502 592 aa5.92□□□□□ -1.46
HMGB1P14-201ENST00000557424 AXIN2Q9Y2T1 843 aa5.92□□□□□ -1.46
HMGB1P14-201ENST00000557424 FECHP22830 423 aa5.91□□□□□ -1.46
HMGB1P14-201ENST00000557424 BRPF1P55201 1214 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P14-201ENST00000557424 USP46P62068 366 aa5.91□□□□□ -1.46
HMGB1P14-201ENST00000557424 PARP9Q8IXQ6 854 aa5.91□□□□□ -1.46
HMGB1P14-201ENST00000557424 KDM4CQ9H3R0 1056 aa5.91□□□□□ -1.46
HMGB1P14-201ENST00000557424 DMRTA1Q5VZB9 504 aa5.9□□□□□ -1.46
HMGB1P14-201ENST00000557424 RDH13Q8NBN7 331 aa5.9□□□□□ -1.46
HMGB1P14-201ENST00000557424 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P14-201ENST00000557424 RNF40O75150 1001 aa5.89□□□□□ -1.47
HMGB1P14-201ENST00000557424 NUTM1Q86Y26 1132 aa5.89□□□□□ -1.47
HMGB1P14-201ENST00000557424 ZFRQ96KR1 1074 aaKnown RBP5.89□□□□□ -1.47
HMGB1P14-201ENST00000557424 GOPCQ9HD26 462 aa5.89□□□□□ -1.47
HMGB1P14-201ENST00000557424 FAM217BQ9NTX9 383 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P14-201ENST00000557424 SEPT9Q9UHD8 586 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P14-201ENST00000557424 BHMG1C9JSJ3 638 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P14-201ENST00000557424 PLA2G2EQ9NZK7 142 aa5.88□□□□□ -1.47
HMGB1P14-201ENST00000557424 DDX11L8A8MPP1 907 aa5.87□□□□□ -1.47
HMGB1P14-201ENST00000557424 SSTR3P32745 418 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P14-201ENST00000557424 WNT2BQ93097 391 aa5.87□□□□□ -1.47
HMGB1P14-201ENST00000557424 HRO43593 1189 aa5.86□□□□□ -1.47
HMGB1P14-201ENST00000557424 GJA5P36382 358 aa5.86□□□□□ -1.47
HMGB1P14-201ENST00000557424 PPP4CP60510 307 aa5.86□□□□□ -1.47
HMGB1P14-201ENST00000557424 SWT1Q5T5J6 900 aaKnown RBP5.86□□□□□ -1.47
HMGB1P14-201ENST00000557424 PCMTD1Q96MG8 357 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P14-201ENST00000557424 FAM198AQ9UFP1 575 aa5.86□□□□□ -1.47
HMGB1P14-201ENST00000557424 TSR3Q9UJK0 312 aaKnown RBP5.86□□□□□ -1.47
HMGB1P14-201ENST00000557424 SOWAHBA6NEL2 793 aa5.85□□□□□ -1.47
HMGB1P14-201ENST00000557424 SMAPO00193 183 aa5.85□□□□□ -1.47
HMGB1P14-201ENST00000557424 POTEEQ6S8J3 1075 aa5.85□□□□□ -1.47
HMGB1P14-201ENST00000557424 SAMD7Q7Z3H4 446 aa5.85□□□□□ -1.47
HMGB1P14-201ENST00000557424 BEGAINQ9BUH8 593 aa5.85□□□□□ -1.47
HMGB1P14-201ENST00000557424 TMUB1Q9BVT8 246 aa5.85□□□□□ -1.47
HMGB1P14-201ENST00000557424 PODXL2Q9NZ53 605 aa5.85□□□□□ -1.47
HMGB1P14-201ENST00000557424 ATP1B4Q9UN42 357 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P14-201ENST00000557424 APBB1O00213 710 aa5.84□□□□□ -1.47
HMGB1P14-201ENST00000557424 CD46P15529 392 aa5.84□□□□□ -1.47
HMGB1P14-201ENST00000557424 FAM161AQ3B820 660 aa5.84□□□□□ -1.47
HMGB1P14-201ENST00000557424 SH3D19Q5HYK7 790 aa5.84□□□□□ -1.47
HMGB1P14-201ENST00000557424 GPBP1L1Q9HC44 474 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P14-201ENST00000557424 KDM4AO75164 1064 aa5.83□□□□□ -1.48
HMGB1P14-201ENST00000557424 Q3C1V9 767 aa5.83□□□□□ -1.48
HMGB1P14-201ENST00000557424 CFHP08603 1231 aa5.82□□□□□ -1.48
HMGB1P14-201ENST00000557424 UBTFP17480 764 aaKnown RBP5.82□□□□□ -1.48
HMGB1P14-201ENST00000557424 PHOX2BQ99453 314 aa5.82□□□□□ -1.48
HMGB1P14-201ENST00000557424 HPS5Q9UPZ3 1129 aa5.82□□□□□ -1.48
HMGB1P14-201ENST00000557424 SPDYE5A6NIY4 337 aa5.81□□□□□ -1.48
HMGB1P14-201ENST00000557424 NR1I2O75469 434 aa5.81□□□□□ -1.48
HMGB1P14-201ENST00000557424 GCGRP47871 477 aa5.81□□□□□ -1.48
HMGB1P14-201ENST00000557424 TUSC1Q2TAM9 212 aa5.81□□□□□ -1.48
HMGB1P14-201ENST00000557424 THSD4Q6ZMP0 1018 aa5.81□□□□□ -1.48
HMGB1P14-201ENST00000557424 HCSTQ9UBK5 93 aa5.81□□□□□ -1.48
HMGB1P14-201ENST00000557424 ACTN4O43707 911 aaKnown RBP5.8□□□□□ -1.48
HMGB1P14-201ENST00000557424 MS4A1P11836 297 aa5.8□□□□□ -1.48
HMGB1P14-201ENST00000557424 ATP6V1AP38606 617 aa5.8□□□□□ -1.48
HMGB1P14-201ENST00000557424 CLK2P49760 499 aaKnown RBP5.8□□□□□ -1.48
HMGB1P14-201ENST00000557424 SKIV2LQ15477 1246 aaKnown RBP5.8□□□□□ -1.48
HMGB1P14-201ENST00000557424 IL27Q8NEV9 243 aa5.8□□□□□ -1.48
HMGB1P14-201ENST00000557424 PRPF38BQ5VTL8 546 aaKnown RBP5.79□□□□□ -1.48
HMGB1P14-201ENST00000557424 KCTD12Q96CX2 325 aaKnown RBP5.79□□□□□ -1.48
HMGB1P14-201ENST00000557424 TBC1D2Q9BYX2 928 aa5.79□□□□□ -1.48
HMGB1P14-201ENST00000557424 FAM117AQ9C073 453 aa5.79□□□□□ -1.48
HMGB1P14-201ENST00000557424 PRM3Q9NNZ6 103 aa5.79□□□□□ -1.48
HMGB1P14-201ENST00000557424 PCDHB3Q9Y5E6 796 aa5.79□□□□□ -1.48
HMGB1P14-201ENST00000557424 TRIM26Q12899 539 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P14-201ENST00000557424 PNMA1Q8ND90 353 aa5.77□□□□□ -1.49
HMGB1P14-201ENST00000557424 NLRP7Q8WX94 980 aa5.77□□□□□ -1.49
HMGB1P14-201ENST00000557424 ZBTB3Q9H5J0 574 aa5.77□□□□□ -1.49
HMGB1P14-201ENST00000557424 SPTLC1O15269 473 aa5.76□□□□□ -1.49
HMGB1P14-201ENST00000557424 HOXA2O43364 376 aa5.76□□□□□ -1.49
HMGB1P14-201ENST00000557424 FDX1P10109 184 aa5.76□□□□□ -1.49
HMGB1P14-201ENST00000557424 BCAMP50895 628 aa5.76□□□□□ -1.49
HMGB1P14-201ENST00000557424 FLIIQ13045 1269 aa5.76□□□□□ -1.49
HMGB1P14-201ENST00000557424 MYSM1Q5VVJ2 828 aa5.76□□□□□ -1.49
HMGB1P14-201ENST00000557424 RIC3Q7Z5B4 369 aa5.76□□□□□ -1.49
HMGB1P14-201ENST00000557424 HELBQ8NG08 1087 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P14-201ENST00000557424 SPIRE2Q8WWL2 714 aa5.76□□□□□ -1.49
HMGB1P14-201ENST00000557424 SALL2Q9Y467 1007 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P14-201ENST00000557424 GGCXP38435 758 aa5.75□□□□□ -1.49
HMGB1P14-201ENST00000557424 RSBN1LQ6PCB5 846 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P14-201ENST00000557424 REPIN1Q9BWE0 567 aaKnown RBP5.75□□□□□ -1.49
HMGB1P14-201ENST00000557424 NUTM2BA6NNL0 878 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P14-201ENST00000557424 NUTM2EB1AL46 878 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P14-201ENST00000557424 C3orf80F5H4A9 247 aa5.74□□□□□ -1.49
HMGB1P14-201ENST00000557424 FMNL1O95466 1100 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P14-201ENST00000557424 SLC10A3P09131 477 aa5.74□□□□□ -1.49
HMGB1P14-201ENST00000557424 FUT2Q10981 343 aa5.74□□□□□ -1.49
HMGB1P14-201ENST00000557424 MTMR2Q13614 643 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms