RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 NKTRP30414 1462 aaKnown RBP23.96■■□□□ 1.43
SUPT16H-205ENST00000556217 ANKRD50Q9ULJ7 1429 aa23.95■■□□□ 1.42
SUPT16H-205ENST00000556217 ROBO1Q9Y6N7 1651 aa23.95■■□□□ 1.42
SUPT16H-205ENST00000556217 NWD1Q149M9 1564 aa23.95■■□□□ 1.42
SUPT16H-205ENST00000556217 HDGFP51858 240 aaKnown RBP23.92■■□□□ 1.42
SUPT16H-205ENST00000556217 MYO5BQ9ULV0 1848 aa23.91■■□□□ 1.42
SUPT16H-205ENST00000556217 SETD1AO15047 1707 aaKnown RBP23.91■■□□□ 1.42
SUPT16H-205ENST00000556217 MSH6P52701 1360 aa23.91■■□□□ 1.42
SUPT16H-205ENST00000556217 GCC2Q8IWJ2 1684 aa23.9■■□□□ 1.42
SUPT16H-205ENST00000556217 PPP1R15AO75807 674 aaPredicted RBP23.89■■□□□ 1.41
SUPT16H-205ENST00000556217 JCADQ9P266 1359 aa23.89■■□□□ 1.41
SUPT16H-205ENST00000556217 PLEKHG1Q9ULL1 1385 aa23.89■■□□□ 1.41
SUPT16H-205ENST00000556217 ZFYVE9O95405 1425 aa23.88■■□□□ 1.41
SUPT16H-205ENST00000556217 RBM33Q96EV2 1170 aaKnown RBP23.88■■□□□ 1.41
SUPT16H-205ENST00000556217 CHD2O14647 1828 aaKnown RBP23.88■■□□□ 1.41
SUPT16H-205ENST00000556217 RIMS2Q9UQ26 1411 aa23.86■■□□□ 1.41
SUPT16H-205ENST00000556217 TMEM131LA2VDJ0 1609 aa23.86■■□□□ 1.41
SUPT16H-205ENST00000556217 SLAIN2Q9P270 581 aa23.86■■□□□ 1.41
SUPT16H-205ENST00000556217 UNC13BO14795 1591 aa23.86■■□□□ 1.41
SUPT16H-205ENST00000556217 UPF1Q92900 1129 aaKnown RBP eCLIP23.85■■□□□ 1.41
SUPT16H-205ENST00000556217 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.83■■□□□ 1.41
SUPT16H-205ENST00000556217 PHLPP1O60346 1717 aa23.83■■□□□ 1.41
SUPT16H-205ENST00000556217 E9PCH4 1651 aa23.8■■□□□ 1.4
SUPT16H-205ENST00000556217 CHGAP10645 457 aaKnown RBP23.8■■□□□ 1.4
SUPT16H-205ENST00000556217 ZNF772Q68DY9 489 aaPredicted RBP23.8■■□□□ 1.4
SUPT16H-205ENST00000556217 TBX22Q9Y458 520 aa23.8■■□□□ 1.4
SUPT16H-205ENST00000556217 NCOA3Q9Y6Q9 1424 aa23.78■■□□□ 1.4
SUPT16H-205ENST00000556217 MEX3CQ5U5Q3 659 aaKnown RBP23.78■■□□□ 1.4
SUPT16H-205ENST00000556217 ROCK1Q13464 1354 aa23.78■■□□□ 1.4
SUPT16H-205ENST00000556217 IQGAP3Q86VI3 1631 aa23.77■■□□□ 1.4
SUPT16H-205ENST00000556217 TRIM52Q96A61 297 aa23.77■■□□□ 1.4
SUPT16H-205ENST00000556217 SPATA31A6Q5VVP1 1343 aa23.77■■□□□ 1.4
SUPT16H-205ENST00000556217 DIP2AQ14689 1571 aa23.77■■□□□ 1.4
SUPT16H-205ENST00000556217 C14orf37Q86TY3 774 aa23.75■■□□□ 1.39
SUPT16H-205ENST00000556217 PIK3R4Q99570 1358 aa23.73■■□□□ 1.39
SUPT16H-205ENST00000556217 COL16A1Q07092 1604 aaPredicted RBP23.71■■□□□ 1.39
SUPT16H-205ENST00000556217 ADAMTS13Q76LX8 1427 aa23.71■■□□□ 1.39
SUPT16H-205ENST00000556217 RXRBP28702 533 aa23.7■■□□□ 1.38
SUPT16H-205ENST00000556217 NUTM2DQ5VT03 806 aaPredicted RBP23.7■■□□□ 1.38
SUPT16H-205ENST00000556217 CADPS2Q86UW7 1296 aa23.7■■□□□ 1.38
SUPT16H-205ENST00000556217 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.7■■□□□ 1.38
SUPT16H-205ENST00000556217 LRP6O75581 1613 aa23.7■■□□□ 1.38
SUPT16H-205ENST00000556217 TRPM2O94759 1503 aa23.69■■□□□ 1.38
SUPT16H-205ENST00000556217 NUP155O75694 1391 aa23.69■■□□□ 1.38
SUPT16H-205ENST00000556217 ATF3P18847 181 aa23.69■■□□□ 1.38
SUPT16H-205ENST00000556217 C19orf44Q9H6X5 657 aa23.69■■□□□ 1.38
SUPT16H-205ENST00000556217 AHDC1Q5TGY3 1603 aaPredicted RBP23.64■■□□□ 1.38
SUPT16H-205ENST00000556217 ITGAEP38570 1179 aa23.63■■□□□ 1.37
SUPT16H-205ENST00000556217 AMOTL2Q9Y2J4 779 aa23.63■■□□□ 1.37
SUPT16H-205ENST00000556217 CDK12Q9NYV4 1490 aaPredicted RBP23.62■■□□□ 1.37
SUPT16H-205ENST00000556217 SPHKAPQ2M3C7 1700 aa23.62■■□□□ 1.37
SUPT16H-205ENST00000556217 SHPRHQ149N8 1683 aa23.61■■□□□ 1.37
SUPT16H-205ENST00000556217 DCCP43146 1447 aa23.59■■□□□ 1.37
SUPT16H-205ENST00000556217 SETBP1Q9Y6X0 1596 aa23.58■■□□□ 1.37
SUPT16H-205ENST00000556217 PTPRUQ92729 1446 aa23.58■■□□□ 1.36
SUPT16H-205ENST00000556217 SRCAPQ6ZRS2 3230 aa23.57■■□□□ 1.36
SUPT16H-205ENST00000556217 NUTM2BA6NNL0 878 aaPredicted RBP23.57■■□□□ 1.36
SUPT16H-205ENST00000556217 NUTM2EB1AL46 878 aaPredicted RBP23.57■■□□□ 1.36
SUPT16H-205ENST00000556217 NUTM2AQ8IVF1 878 aaPredicted RBP23.57■■□□□ 1.36
SUPT16H-205ENST00000556217 XRN1Q8IZH2 1706 aaKnown RBP23.56■■□□□ 1.36
SUPT16H-205ENST00000556217 NRXN3Q9Y4C0 1643 aa23.56■■□□□ 1.36
SUPT16H-205ENST00000556217 ZNF326Q5BKZ1 582 aaKnown RBP23.56■■□□□ 1.36
SUPT16H-205ENST00000556217 BRINP3Q76B58 766 aa23.54■■□□□ 1.36
SUPT16H-205ENST00000556217 AFF2P51816 1311 aa23.54■■□□□ 1.36
SUPT16H-205ENST00000556217 ASXL1Q8IXJ9 1541 aa23.51■■□□□ 1.35
SUPT16H-205ENST00000556217 KIF1BO60333 1816 aa23.48■■□□□ 1.35
SUPT16H-205ENST00000556217 RBM6P78332 1123 aaKnown RBP23.48■■□□□ 1.35
SUPT16H-205ENST00000556217 NHSL1Q5SYE7 1610 aa23.48■■□□□ 1.35
SUPT16H-205ENST00000556217 PPARGC1BQ86YN6 1023 aaKnown RBP23.47■■□□□ 1.35
SUPT16H-205ENST00000556217 QTRT2Q9H974 415 aaKnown RBP23.47■■□□□ 1.35
SUPT16H-205ENST00000556217 METP08581 1390 aa23.47■■□□□ 1.35
SUPT16H-205ENST00000556217 MST1RQ04912 1400 aa23.47■■□□□ 1.35
SUPT16H-205ENST00000556217 CLTCL1P53675 1640 aa23.47■■□□□ 1.35
SUPT16H-205ENST00000556217 SETD5Q9C0A6 1442 aa23.46■■□□□ 1.35
SUPT16H-205ENST00000556217 NEXMIFQ5QGS0 1516 aa23.45■■□□□ 1.34
SUPT16H-205ENST00000556217 ADGRL3Q9HAR2 1447 aa23.44■■□□□ 1.34
SUPT16H-205ENST00000556217 LRRC59Q96AG4 307 aaKnown RBP23.44■■□□□ 1.34
SUPT16H-205ENST00000556217 RGS12O14924 1447 aa23.43■■□□□ 1.34
SUPT16H-205ENST00000556217 FOXD1Q16676 465 aa23.43■■□□□ 1.34
SUPT16H-205ENST00000556217 C8orf37Q96NL8 207 aa23.43■■□□□ 1.34
SUPT16H-205ENST00000556217 NALCNQ8IZF0 1738 aa23.42■■□□□ 1.34
SUPT16H-205ENST00000556217 NGLY1Q96IV0 654 aa23.4■■□□□ 1.34
SUPT16H-205ENST00000556217 NAIPQ13075 1403 aa23.37■■□□□ 1.33
SUPT16H-205ENST00000556217 RRBP1Q9P2E9 1410 aaKnown RBP23.37■■□□□ 1.33
SUPT16H-205ENST00000556217 VGFO15240 615 aaPredicted RBP23.37■■□□□ 1.33
SUPT16H-205ENST00000556217 ATAD2Q6PL18 1390 aa23.37■■□□□ 1.33
SUPT16H-205ENST00000556217 ZRANB1Q9UGI0 708 aa23.36■■□□□ 1.33
SUPT16H-205ENST00000556217 PTCH1Q13635 1447 aa23.35■■□□□ 1.33
SUPT16H-205ENST00000556217 PNPLA6Q8IY17 1366 aa23.34■■□□□ 1.33
SUPT16H-205ENST00000556217 C1orf167Q5SNV9 1468 aa23.33■■□□□ 1.33
SUPT16H-205ENST00000556217 DDX17Q92841 729 aaKnown RBP23.33■■□□□ 1.33
SUPT16H-205ENST00000556217 RPGRIP1LQ68CZ1 1315 aa23.32■■□□□ 1.32
SUPT16H-205ENST00000556217 LAMC1P11047 1609 aa23.31■■□□□ 1.32
SUPT16H-205ENST00000556217 ADAMTS2O95450 1211 aa23.3■■□□□ 1.32
SUPT16H-205ENST00000556217 ROBO2Q9HCK4 1378 aa23.28■■□□□ 1.32
SUPT16H-205ENST00000556217 PRAG1Q86YV5 1406 aa23.28■■□□□ 1.32
SUPT16H-205ENST00000556217 PPLO60437 1756 aa23.28■■□□□ 1.32
SUPT16H-205ENST00000556217 HFM1A2PYH4 1435 aa23.27■■□□□ 1.32
SUPT16H-205ENST00000556217 SLC4A1APQ9BWU0 796 aaKnown RBP23.27■■□□□ 1.32
SUPT16H-205ENST00000556217 TRPC5Q9UL62 973 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms