RNA–Protein interactions for RNA: ENST00000556074.5

NEMF-209, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 3,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-209ENST00000556074 PPP1R37O75864 691 aa9.66□□□□□ -0.86
NEMF-209ENST00000556074 PAX3P23760 479 aa9.66□□□□□ -0.86
NEMF-209ENST00000556074 LONRF3Q496Y0 759 aa9.66□□□□□ -0.86
NEMF-209ENST00000556074 GDPD2Q9HCC8 539 aa9.66□□□□□ -0.86
NEMF-209ENST00000556074 NAP1L2Q9ULW6 460 aaPredicted RBP9.66□□□□□ -0.86
NEMF-209ENST00000556074 TTLL12Q14166 644 aaPredicted RBP9.66□□□□□ -0.86
NEMF-209ENST00000556074 NCKAP5LQ9HCH0 1330 aa9.66□□□□□ -0.86
NEMF-209ENST00000556074 IRF6O14896 467 aa9.66□□□□□ -0.86
NEMF-209ENST00000556074 ERCC3P19447 782 aa9.66□□□□□ -0.86
NEMF-209ENST00000556074 PNMA2Q9UL42 364 aa9.66□□□□□ -0.86
NEMF-209ENST00000556074 NEFMP07197 916 aa9.65□□□□□ -0.86
NEMF-209ENST00000556074 LNPKQ9C0E8 428 aa9.65□□□□□ -0.86
NEMF-209ENST00000556074 RECKO95980 971 aa9.64□□□□□ -0.87
NEMF-209ENST00000556074 PTMAP06454 111 aaKnown RBP9.64□□□□□ -0.87
NEMF-209ENST00000556074 MAP2K5Q13163 448 aa9.64□□□□□ -0.87
NEMF-209ENST00000556074 EGFLAMQ63HQ2 1017 aa9.64□□□□□ -0.87
NEMF-209ENST00000556074 MAGEC2Q9UBF1 373 aaPredicted RBP9.64□□□□□ -0.87
NEMF-209ENST00000556074 GABBR1Q9UBS5 961 aa9.64□□□□□ -0.87
NEMF-209ENST00000556074 FAN1Q9Y2M0 1017 aa9.64□□□□□ -0.87
NEMF-209ENST00000556074 GIGYF2Q6Y7W6 1299 aaKnown RBP9.64□□□□□ -0.87
NEMF-209ENST00000556074 SPACA7Q96KW9 195 aa9.64□□□□□ -0.87
NEMF-209ENST00000556074 MTA3Q9BTC8 594 aa9.64□□□□□ -0.87
NEMF-209ENST00000556074 ABCC9O60706 1549 aa9.63□□□□□ -0.87
NEMF-209ENST00000556074 ZFYVE27Q5T4F4 411 aa9.63□□□□□ -0.87
NEMF-209ENST00000556074 SPOCK3Q9BQ16 436 aa9.63□□□□□ -0.87
NEMF-209ENST00000556074 U2SURPO15042 1029 aaKnown RBP9.63□□□□□ -0.87
NEMF-209ENST00000556074 NOP9Q86U38 636 aaKnown RBP9.63□□□□□ -0.87
NEMF-209ENST00000556074 TMA7Q9Y2S6 64 aaKnown RBP9.63□□□□□ -0.87
NEMF-209ENST00000556074 APLP1P51693 650 aa9.62□□□□□ -0.87
NEMF-209ENST00000556074 REPIN1Q9BWE0 567 aaKnown RBP9.62□□□□□ -0.87
NEMF-209ENST00000556074 PTPROQ16827 1216 aa9.62□□□□□ -0.87
NEMF-209ENST00000556074 NPAS4Q8IUM7 802 aa9.62□□□□□ -0.87
NEMF-209ENST00000556074 hCG_2014768A0A024R1R8 64 aa9.61□□□□□ -0.87
NEMF-209ENST00000556074 TLDC2A0PJX2 215 aa9.61□□□□□ -0.87
NEMF-209ENST00000556074 IGBP1P78318 339 aa9.61□□□□□ -0.87
NEMF-209ENST00000556074 MFRPQ9BY79 579 aa9.61□□□□□ -0.87
NEMF-209ENST00000556074 SH3BP5O60239 455 aa9.61□□□□□ -0.87
NEMF-209ENST00000556074 KRBA2Q6ZNG9 492 aa9.61□□□□□ -0.87
NEMF-209ENST00000556074 CHPF2Q9P2E5 772 aa9.61□□□□□ -0.87
NEMF-209ENST00000556074 ADAMTS19Q8TE59 1207 aa9.6□□□□□ -0.87
NEMF-209ENST00000556074 CLEC4GQ6UXB4 293 aa9.6□□□□□ -0.87
NEMF-209ENST00000556074 KCNB2Q92953 911 aa9.6□□□□□ -0.87
NEMF-209ENST00000556074 MAF1Q9H063 256 aa9.6□□□□□ -0.87
NEMF-209ENST00000556074 MAMSTRQ6ZN01 415 aa9.59□□□□□ -0.87
NEMF-209ENST00000556074 VAMP1P23763 118 aa9.58□□□□□ -0.88
NEMF-209ENST00000556074 TAGLNQ01995 201 aaKnown RBP9.58□□□□□ -0.88
NEMF-209ENST00000556074 NLGN1Q8N2Q7 840 aa9.58□□□□□ -0.88
NEMF-209ENST00000556074 LARP6Q9BRS8 491 aaKnown RBP9.58□□□□□ -0.88
NEMF-209ENST00000556074 SDE2Q6IQ49 451 aa9.57□□□□□ -0.88
NEMF-209ENST00000556074 CCER2I3L3R5 266 aa9.57□□□□□ -0.88
NEMF-209ENST00000556074 FBXO31Q5XUX0 539 aaPredicted RBP9.57□□□□□ -0.88
NEMF-209ENST00000556074 C7P10643 843 aa9.56□□□□□ -0.88
NEMF-209ENST00000556074 EIF3JO75822 258 aaKnown RBP9.56□□□□□ -0.88
NEMF-209ENST00000556074 KIF4AO95239 1232 aa9.56□□□□□ -0.88
NEMF-209ENST00000556074 FECHP22830 423 aa9.56□□□□□ -0.88
NEMF-209ENST00000556074 ARID4AP29374 1257 aaPredicted RBP9.56□□□□□ -0.88
NEMF-209ENST00000556074 ABL2P42684 1182 aa9.56□□□□□ -0.88
NEMF-209ENST00000556074 ZNF467Q7Z7K2 595 aaPredicted RBP9.56□□□□□ -0.88
NEMF-209ENST00000556074 HMGB1P1B2RPK0 211 aaPredicted RBP9.55□□□□□ -0.88
NEMF-209ENST00000556074 IPO4Q8TEX9 1081 aaKnown RBP9.55□□□□□ -0.88
NEMF-209ENST00000556074 MYBPC2Q14324 1141 aa9.55□□□□□ -0.88
NEMF-209ENST00000556074 TBX22Q9Y458 520 aa9.55□□□□□ -0.88
NEMF-209ENST00000556074 ERCC5P28715 1186 aaPredicted RBP9.54□□□□□ -0.88
NEMF-209ENST00000556074 CCDC144BQ3MJ40 725 aa9.54□□□□□ -0.88
NEMF-209ENST00000556074 PIF1Q9H611 641 aa9.54□□□□□ -0.88
NEMF-209ENST00000556074 MTMR14Q8NCE2 650 aa9.54□□□□□ -0.88
NEMF-209ENST00000556074 RINLQ6ZS11 566 aa9.53□□□□□ -0.88
NEMF-209ENST00000556074 POLR3EQ9NVU0 708 aa9.53□□□□□ -0.88
NEMF-209ENST00000556074 ATP1B4Q9UN42 357 aaPredicted RBP9.53□□□□□ -0.88
NEMF-209ENST00000556074 DHX38Q92620 1227 aaKnown RBP9.53□□□□□ -0.88
NEMF-209ENST00000556074 HDGFL1Q5TGJ6 251 aa9.53□□□□□ -0.88
NEMF-209ENST00000556074 TSHZ1Q6ZSZ6 1077 aa9.53□□□□□ -0.88
NEMF-209ENST00000556074 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.53□□□□□ -0.88
NEMF-209ENST00000556074 CAMK2BQ13554 666 aa9.52□□□□□ -0.89
NEMF-209ENST00000556074 TCEAL1Q15170 157 aa9.52□□□□□ -0.89
NEMF-209ENST00000556074 CDCA8Q53HL2 280 aa9.52□□□□□ -0.89
NEMF-209ENST00000556074 HSP90AB2PQ58FF8 381 aa9.52□□□□□ -0.89
NEMF-209ENST00000556074 MFSD10Q14728 455 aa9.52□□□□□ -0.89
NEMF-209ENST00000556074 C4orf46Q504U0 113 aa9.52□□□□□ -0.89
NEMF-209ENST00000556074 C9orf131Q5VYM1 1079 aa9.52□□□□□ -0.89
NEMF-209ENST00000556074 FAM193AP78312 1265 aa9.51□□□□□ -0.89
NEMF-209ENST00000556074 C11orf96Q7Z7L8 435 aa9.51□□□□□ -0.89
NEMF-209ENST00000556074 TANGO6Q9C0B7 1094 aa9.51□□□□□ -0.89
NEMF-209ENST00000556074 TSNAXIP1Q2TAA8 658 aa9.51□□□□□ -0.89
NEMF-209ENST00000556074 PDAP1Q13442 181 aaKnown RBP9.5□□□□□ -0.89
NEMF-209ENST00000556074 GNL3LQ9NVN8 582 aaKnown RBP9.5□□□□□ -0.89
NEMF-209ENST00000556074 PHLDB3Q6NSJ2 640 aa9.5□□□□□ -0.89
NEMF-209ENST00000556074 CCDC146Q8IYE0 955 aa9.5□□□□□ -0.89
NEMF-209ENST00000556074 PPP1R12CQ9BZL4 782 aa9.5□□□□□ -0.89
NEMF-209ENST00000556074 CUEDC1Q9NWM3 386 aaPredicted RBP9.5□□□□□ -0.89
NEMF-209ENST00000556074 ANKRD33BA6NCL7 494 aa9.5□□□□□ -0.89
NEMF-209ENST00000556074 CCER1Q8TC90 406 aaPredicted RBP9.49□□□□□ -0.89
NEMF-209ENST00000556074 TBC1D2BQ9UPU7 963 aa9.49□□□□□ -0.89
NEMF-209ENST00000556074 NOP58Q9Y2X3 529 aaKnown RBP9.49□□□□□ -0.89
NEMF-209ENST00000556074 MARSP56192 900 aaKnown RBP9.49□□□□□ -0.89
NEMF-209ENST00000556074 BANK1Q8NDB2 785 aa9.49□□□□□ -0.89
NEMF-209ENST00000556074 RFC5P40937 340 aa9.48□□□□□ -0.89
NEMF-209ENST00000556074 PIK3R5Q8WYR1 880 aa9.48□□□□□ -0.89
NEMF-209ENST00000556074 FTSJ3Q8IY81 847 aaKnown RBP9.48□□□□□ -0.89
NEMF-209ENST00000556074 G3BP2Q9UN86 482 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms