RNA–Protein interactions for RNA: ENST00000555690.5

PPP4R4-204, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 3

Gene PPP4R4, Length 680 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-204ENST00000555690 PROSER2Q86WR7 435 aaPredicted RBP37.46■■■■□ 3.59
PPP4R4-204ENST00000555690 GCC2Q8IWJ2 1684 aa37.46■■■■□ 3.59
PPP4R4-204ENST00000555690 RBM33Q96EV2 1170 aaKnown RBP37.45■■■■□ 3.59
PPP4R4-204ENST00000555690 ZFYVE9O95405 1425 aa37.44■■■■□ 3.58
PPP4R4-204ENST00000555690 CHGAP10645 457 aaKnown RBP37.42■■■■□ 3.58
PPP4R4-204ENST00000555690 MYO5BQ9ULV0 1848 aa37.42■■■■□ 3.58
PPP4R4-204ENST00000555690 RIMS2Q9UQ26 1411 aa37.42■■■■□ 3.58
PPP4R4-204ENST00000555690 PPP1R15AO75807 674 aaPredicted RBP37.41■■■■□ 3.58
PPP4R4-204ENST00000555690 HDGFP51858 240 aaKnown RBP37.41■■■■□ 3.58
PPP4R4-204ENST00000555690 NUP155O75694 1391 aa37.4■■■■□ 3.58
PPP4R4-204ENST00000555690 TMEM131LA2VDJ0 1609 aa37.39■■■■□ 3.58
PPP4R4-204ENST00000555690 E9PCH4 1651 aa37.39■■■■□ 3.58
PPP4R4-204ENST00000555690 PLEKHG1Q9ULL1 1385 aa37.39■■■■□ 3.58
PPP4R4-204ENST00000555690 IQGAP3Q86VI3 1631 aa37.36■■■■□ 3.57
PPP4R4-204ENST00000555690 PHF23Q9BUL5 403 aaPredicted RBP37.35■■■■□ 3.57
PPP4R4-204ENST00000555690 NWD1Q149M9 1564 aa37.34■■■■□ 3.57
PPP4R4-204ENST00000555690 NKTRP30414 1462 aaKnown RBP37.33■■■■□ 3.57
PPP4R4-204ENST00000555690 FAM135BQ49AJ0 1406 aa37.33■■■■□ 3.57
PPP4R4-204ENST00000555690 NUTM2DQ5VT03 806 aaPredicted RBP37.32■■■■□ 3.56
PPP4R4-204ENST00000555690 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.32■■■■□ 3.56
PPP4R4-204ENST00000555690 TBX22Q9Y458 520 aa37.28■■■■□ 3.56
PPP4R4-204ENST00000555690 MSH6P52701 1360 aa37.24■■■■□ 3.55
PPP4R4-204ENST00000555690 CHD2O14647 1828 aaKnown RBP37.23■■■■□ 3.55
PPP4R4-204ENST00000555690 ADAMTS13Q76LX8 1427 aa37.19■■■■□ 3.54
PPP4R4-204ENST00000555690 ROBO1Q9Y6N7 1651 aa37.18■■■■□ 3.54
PPP4R4-204ENST00000555690 SLAIN2Q9P270 581 aa37.17■■■■□ 3.54
PPP4R4-204ENST00000555690 RRBP1Q9P2E9 1410 aaKnown RBP37.13■■■■□ 3.53
PPP4R4-204ENST00000555690 C14orf37Q86TY3 774 aa37.1■■■■□ 3.53
PPP4R4-204ENST00000555690 DIP2AQ14689 1571 aa37.09■■■■□ 3.53
PPP4R4-204ENST00000555690 RGS17Q9UGC6 210 aaPredicted RBP37.09■■■■□ 3.53
PPP4R4-204ENST00000555690 PIK3R4Q99570 1358 aa37.08■■■■□ 3.53
PPP4R4-204ENST00000555690 NCOA3Q9Y6Q9 1424 aa37.08■■■■□ 3.53
PPP4R4-204ENST00000555690 SPHKAPQ2M3C7 1700 aa37.06■■■■□ 3.52
PPP4R4-204ENST00000555690 ZNF326Q5BKZ1 582 aaKnown RBP37.06■■■■□ 3.52
PPP4R4-204ENST00000555690 AMOTL2Q9Y2J4 779 aa37.05■■■■□ 3.52
PPP4R4-204ENST00000555690 NAIPQ13075 1403 aa37.03■■■■□ 3.52
PPP4R4-204ENST00000555690 TRPM2O94759 1503 aa37.02■■■■□ 3.52
PPP4R4-204ENST00000555690 PTPRUQ92729 1446 aa37.02■■■■□ 3.52
PPP4R4-204ENST00000555690 C19orf44Q9H6X5 657 aa37.01■■■■□ 3.52
PPP4R4-204ENST00000555690 ATF3P18847 181 aa36.97■■■■□ 3.51
PPP4R4-204ENST00000555690 CADPS2Q86UW7 1296 aa36.97■■■■□ 3.51
PPP4R4-204ENST00000555690 PHLPP1O60346 1717 aa36.96■■■■□ 3.51
PPP4R4-204ENST00000555690 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.93■■■■□ 3.5
PPP4R4-204ENST00000555690 NRXN3Q9Y4C0 1643 aa36.93■■■■□ 3.5
PPP4R4-204ENST00000555690 TRIM52Q96A61 297 aa36.93■■■■□ 3.5
PPP4R4-204ENST00000555690 CLTCL1P53675 1640 aa36.92■■■■□ 3.5
PPP4R4-204ENST00000555690 SETBP1Q9Y6X0 1596 aa36.92■■■■□ 3.5
PPP4R4-204ENST00000555690 JCADQ9P266 1359 aa36.91■■■■□ 3.5
PPP4R4-204ENST00000555690 METP08581 1390 aa36.89■■■■□ 3.5
PPP4R4-204ENST00000555690 POTEAQ6S8J7 498 aa36.88■■■■□ 3.49
PPP4R4-204ENST00000555690 HFM1A2PYH4 1435 aa36.87■■■■□ 3.49
PPP4R4-204ENST00000555690 COL16A1Q07092 1604 aaPredicted RBP36.85■■■■□ 3.49
PPP4R4-204ENST00000555690 NEXMIFQ5QGS0 1516 aa36.85■■■■□ 3.49
PPP4R4-204ENST00000555690 XRN1Q8IZH2 1706 aaKnown RBP36.84■■■■□ 3.49
PPP4R4-204ENST00000555690 SLC4A1APQ9BWU0 796 aaKnown RBP36.81■■■■□ 3.48
PPP4R4-204ENST00000555690 KIF1BO60333 1816 aa36.8■■■■□ 3.48
PPP4R4-204ENST00000555690 BRINP3Q76B58 766 aa36.79■■■■□ 3.48
PPP4R4-204ENST00000555690 DCCP43146 1447 aa36.77■■■■□ 3.48
PPP4R4-204ENST00000555690 AHDC1Q5TGY3 1603 aaPredicted RBP36.77■■■■□ 3.48
PPP4R4-204ENST00000555690 VGFO15240 615 aaPredicted RBP36.73■■■■□ 3.47
PPP4R4-204ENST00000555690 SPATA31A6Q5VVP1 1343 aa36.72■■■■□ 3.47
PPP4R4-204ENST00000555690 MST1RQ04912 1400 aa36.7■■■■□ 3.47
PPP4R4-204ENST00000555690 LRP6O75581 1613 aa36.68■■■■□ 3.46
PPP4R4-204ENST00000555690 ADGRL3Q9HAR2 1447 aa36.68■■■■□ 3.46
PPP4R4-204ENST00000555690 RPGRIP1LQ68CZ1 1315 aa36.67■■■■□ 3.46
PPP4R4-204ENST00000555690 FOXD1Q16676 465 aa36.67■■■■□ 3.46
PPP4R4-204ENST00000555690 MEX3CQ5U5Q3 659 aaKnown RBP36.66■■■■□ 3.46
PPP4R4-204ENST00000555690 ASXL1Q8IXJ9 1541 aa36.65■■■■□ 3.46
PPP4R4-204ENST00000555690 SHPRHQ149N8 1683 aa36.61■■■■□ 3.45
PPP4R4-204ENST00000555690 NALCNQ8IZF0 1738 aa36.59■■■■□ 3.45
PPP4R4-204ENST00000555690 ROBO2Q9HCK4 1378 aa36.58■■■■□ 3.45
PPP4R4-204ENST00000555690 NUTM2BA6NNL0 878 aaPredicted RBP36.58■■■■□ 3.45
PPP4R4-204ENST00000555690 NUTM2EB1AL46 878 aaPredicted RBP36.58■■■■□ 3.45
PPP4R4-204ENST00000555690 NUTM2AQ8IVF1 878 aaPredicted RBP36.58■■■■□ 3.45
PPP4R4-204ENST00000555690 SETD1AO15047 1707 aaKnown RBP36.57■■■■□ 3.45
PPP4R4-204ENST00000555690 DDX17Q92841 729 aaKnown RBP36.57■■■■□ 3.44
PPP4R4-204ENST00000555690 PTCH1Q13635 1447 aa36.56■■■■□ 3.44
PPP4R4-204ENST00000555690 SETD5Q9C0A6 1442 aa36.55■■■■□ 3.44
PPP4R4-204ENST00000555690 PPLO60437 1756 aa36.54■■■■□ 3.44
PPP4R4-204ENST00000555690 ZNF772Q68DY9 489 aaPredicted RBP36.54■■■■□ 3.44
PPP4R4-204ENST00000555690 NHSL1Q5SYE7 1610 aa36.53■■■■□ 3.44
PPP4R4-204ENST00000555690 LRRC59Q96AG4 307 aaKnown RBP36.53■■■■□ 3.44
PPP4R4-204ENST00000555690 MPHOSPH9Q99550 1183 aa36.52■■■■□ 3.44
PPP4R4-204ENST00000555690 CCDC144AA2RUR9 1427 aa36.51■■■■□ 3.43
PPP4R4-204ENST00000555690 C1orf167Q5SNV9 1468 aa36.5■■■■□ 3.43
PPP4R4-204ENST00000555690 RGL3Q3MIN7 710 aa36.5■■■■□ 3.43
PPP4R4-204ENST00000555690 ADGRF5Q8IZF2 1346 aa36.47■■■■□ 3.43
PPP4R4-204ENST00000555690 PRAG1Q86YV5 1406 aa36.46■■■■□ 3.43
PPP4R4-204ENST00000555690 ORAI2Q96SN7 254 aa36.44■■■■□ 3.42
PPP4R4-204ENST00000555690 SPATA31E1Q6ZUB1 1445 aa36.42■■■■□ 3.42
PPP4R4-204ENST00000555690 PNPLA6Q8IY17 1366 aa36.41■■■■□ 3.42
PPP4R4-204ENST00000555690 AFF2P51816 1311 aa36.38■■■■□ 3.41
PPP4R4-204ENST00000555690 ANKRD30BQ9BXX2 1392 aa36.37■■■■□ 3.41
PPP4R4-204ENST00000555690 RXRBP28702 533 aa36.36■■■■□ 3.41
PPP4R4-204ENST00000555690 STK26Q9P289 416 aa36.36■■■■□ 3.41
PPP4R4-204ENST00000555690 C8orf37Q96NL8 207 aa36.34■■■■□ 3.41
PPP4R4-204ENST00000555690 SOS2Q07890 1332 aaPredicted RBP36.34■■■■□ 3.41
PPP4R4-204ENST00000555690 TMEM132EQ6IEE7 984 aa36.31■■■■□ 3.4
PPP4R4-204ENST00000555690 WAPLQ7Z5K2 1190 aa36.31■■■■□ 3.4
PPP4R4-204ENST00000555690 LAMC1P11047 1609 aa36.3■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms