RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PADI6Q6TGC4 694 aa11□□□□□ -0.65
SRP54-207ENST00000555535 BBXQ8WY36 941 aaPredicted RBP10.99□□□□□ -0.65
SRP54-207ENST00000555535 WDR70Q9NW82 654 aa10.99□□□□□ -0.65
SRP54-207ENST00000555535 EYA1Q99502 592 aa10.98□□□□□ -0.65
SRP54-207ENST00000555535 ZNF697Q5TEC3 545 aa10.96□□□□□ -0.65
SRP54-207ENST00000555535 BLOC1S3Q6QNY0 202 aa10.96□□□□□ -0.65
SRP54-207ENST00000555535 FAM187AA6NFU0 413 aa10.95□□□□□ -0.66
SRP54-207ENST00000555535 KMT5BQ4FZB7 885 aa10.95□□□□□ -0.66
SRP54-207ENST00000555535 EMID1Q96A84 441 aaPredicted RBP10.95□□□□□ -0.66
SRP54-207ENST00000555535 NPDC1Q9NQX5 325 aaPredicted RBP10.95□□□□□ -0.66
SRP54-207ENST00000555535 TREML4Q6UXN2 200 aa10.94□□□□□ -0.66
SRP54-207ENST00000555535 DNAJB2P25686 324 aa10.93□□□□□ -0.66
SRP54-207ENST00000555535 ACTN4O43707 911 aaKnown RBP10.92□□□□□ -0.66
SRP54-207ENST00000555535 LMOD2Q6P5Q4 547 aa10.92□□□□□ -0.66
SRP54-207ENST00000555535 GDF9O60383 454 aa10.91□□□□□ -0.66
SRP54-207ENST00000555535 POTECB2RU33 542 aa10.9□□□□□ -0.66
SRP54-207ENST00000555535 S1PR4O95977 384 aa10.9□□□□□ -0.66
SRP54-207ENST00000555535 LIAT1Q6ZQX7 453 aa10.9□□□□□ -0.66
SRP54-207ENST00000555535 SPRYD3Q8NCJ5 442 aa10.9□□□□□ -0.66
SRP54-207ENST00000555535 TLL1O43897 1013 aa10.89□□□□□ -0.67
SRP54-207ENST00000555535 NR1I2O75469 434 aa10.89□□□□□ -0.67
SRP54-207ENST00000555535 ADH1BP00325 375 aa10.89□□□□□ -0.67
SRP54-207ENST00000555535 RBM46Q8TBY0 533 aaKnown RBP10.89□□□□□ -0.67
SRP54-207ENST00000555535 TNFRSF10AO00220 468 aa10.87□□□□□ -0.67
SRP54-207ENST00000555535 TMEM134Q9H6X4 195 aa10.87□□□□□ -0.67
SRP54-207ENST00000555535 AAASQ9NRG9 546 aa10.87□□□□□ -0.67
SRP54-207ENST00000555535 PPEF1O14829 653 aaPredicted RBP10.85□□□□□ -0.67
SRP54-207ENST00000555535 LCE2AQ5TA79 106 aaPredicted RBP10.85□□□□□ -0.67
SRP54-207ENST00000555535 CRIPAKQ8N1N5 446 aa10.85□□□□□ -0.67
SRP54-207ENST00000555535 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.85□□□□□ -0.67
SRP54-207ENST00000555535 SLC6A16Q9GZN6 736 aa10.84□□□□□ -0.67
SRP54-207ENST00000555535 CFHP08603 1231 aa10.83□□□□□ -0.68
SRP54-207ENST00000555535 ST8SIA5O15466 376 aa10.81□□□□□ -0.68
SRP54-207ENST00000555535 STK17AQ9UEE5 414 aa10.79□□□□□ -0.68
SRP54-207ENST00000555535 ADGRG1Q9Y653 693 aa10.79□□□□□ -0.68
SRP54-207ENST00000555535 WFS1O76024 890 aa10.78□□□□□ -0.68
SRP54-207ENST00000555535 RPIAP49247 311 aa10.78□□□□□ -0.68
SRP54-207ENST00000555535 PTGDRQ13258 359 aa10.78□□□□□ -0.68
SRP54-207ENST00000555535 CTC1Q2NKJ3 1217 aa10.78□□□□□ -0.68
SRP54-207ENST00000555535 RSPH4AQ5TD94 716 aa10.78□□□□□ -0.68
SRP54-207ENST00000555535 RCCD1A6NED2 376 aa10.77□□□□□ -0.69
SRP54-207ENST00000555535 AVPP01185 164 aa10.77□□□□□ -0.69
SRP54-207ENST00000555535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.76□□□□□ -0.69
SRP54-207ENST00000555535 INSM1Q01101 510 aaPredicted RBP10.76□□□□□ -0.69
SRP54-207ENST00000555535 PKD2L1Q9P0L9 805 aa10.76□□□□□ -0.69
SRP54-207ENST00000555535 AXIN1O15169 862 aa10.75□□□□□ -0.69
SRP54-207ENST00000555535 CD2BP2O95400 341 aaKnown RBP10.75□□□□□ -0.69
SRP54-207ENST00000555535 FOXC1Q12948 553 aa10.75□□□□□ -0.69
SRP54-207ENST00000555535 PLA2G2CQ5R387 149 aa10.75□□□□□ -0.69
SRP54-207ENST00000555535 SCUBE3Q8IX30 993 aa10.74□□□□□ -0.69
SRP54-207ENST00000555535 SPSB2Q99619 263 aa10.74□□□□□ -0.69
SRP54-207ENST00000555535 C11orf95C9JLR9 678 aaPredicted RBP10.73□□□□□ -0.69
SRP54-207ENST00000555535 CYP4X1Q8N118 509 aa10.73□□□□□ -0.69
SRP54-207ENST00000555535 WIPF1O43516 503 aa10.72□□□□□ -0.69
SRP54-207ENST00000555535 SMCPP49901 116 aaPredicted RBP10.72□□□□□ -0.69
SRP54-207ENST00000555535 TOR4AQ9NXH8 423 aa10.72□□□□□ -0.69
SRP54-207ENST00000555535 SLC10A3P09131 477 aa10.71□□□□□ -0.69
SRP54-207ENST00000555535 ARHGEF1Q92888 912 aaKnown RBP10.7□□□□□ -0.7
SRP54-207ENST00000555535 OATP04181 439 aa10.69□□□□□ -0.7
SRP54-207ENST00000555535 GMPR2Q9P2T1 348 aaKnown RBP10.68□□□□□ -0.7
SRP54-207ENST00000555535 NFX1Q12986 1120 aaKnown RBP10.66□□□□□ -0.7
SRP54-207ENST00000555535 MLLT3P42568 568 aaPredicted RBP10.65□□□□□ -0.7
SRP54-207ENST00000555535 DACH1Q9UI36 760 aa10.65□□□□□ -0.7
SRP54-207ENST00000555535 NUTM2FA1L443 756 aa10.64□□□□□ -0.71
SRP54-207ENST00000555535 FCHSD2O94868 740 aa10.64□□□□□ -0.71
SRP54-207ENST00000555535 PAXIP1Q6ZW49 1069 aaPredicted RBP10.63□□□□□ -0.71
SRP54-207ENST00000555535 CFAP44Q96MT7 982 aa10.63□□□□□ -0.71
SRP54-207ENST00000555535 FCF1Q9Y324 198 aaKnown RBP10.63□□□□□ -0.71
SRP54-207ENST00000555535 TTC24A2A3L6 582 aaPredicted RBP10.62□□□□□ -0.71
SRP54-207ENST00000555535 ZBTB24O43167 697 aaPredicted RBP10.62□□□□□ -0.71
SRP54-207ENST00000555535 PUS10Q3MIT2 529 aaKnown RBP10.62□□□□□ -0.71
SRP54-207ENST00000555535 PXYLP1Q8TE99 480 aa10.62□□□□□ -0.71
SRP54-207ENST00000555535 SENP2Q9HC62 589 aa10.62□□□□□ -0.71
SRP54-207ENST00000555535 FMNL1O95466 1100 aaPredicted RBP10.6□□□□□ -0.71
SRP54-207ENST00000555535 FAM161AQ3B820 660 aa10.6□□□□□ -0.71
SRP54-207ENST00000555535 SALL2Q9Y467 1007 aaPredicted RBP10.6□□□□□ -0.71
SRP54-207ENST00000555535 MORN1Q5T089 497 aa10.59□□□□□ -0.71
SRP54-207ENST00000555535 FAM181BA6NEQ2 426 aa10.58□□□□□ -0.72
SRP54-207ENST00000555535 ATP6V1AP38606 617 aa10.57□□□□□ -0.72
SRP54-207ENST00000555535 SNIP1Q8TAD8 396 aaKnown RBP10.57□□□□□ -0.72
SRP54-207ENST00000555535 THAP11Q96EK4 314 aa10.57□□□□□ -0.72
SRP54-207ENST00000555535 WNT7AO00755 349 aa10.56□□□□□ -0.72
SRP54-207ENST00000555535 TERTO14746 1132 aaKnown RBP10.56□□□□□ -0.72
SRP54-207ENST00000555535 KIFC2Q96AC6 838 aa10.56□□□□□ -0.72
SRP54-207ENST00000555535 ATP13A2Q9NQ11 1180 aa10.56□□□□□ -0.72
SRP54-207ENST00000555535 METTL3Q86U44 580 aaKnown RBP10.55□□□□□ -0.72
SRP54-207ENST00000555535 TRIM47Q96LD4 638 aa10.55□□□□□ -0.72
SRP54-207ENST00000555535 RDH13Q8NBN7 331 aa10.54□□□□□ -0.72
SRP54-207ENST00000555535 DAXXQ9UER7 740 aaPredicted RBP10.54□□□□□ -0.72
SRP54-207ENST00000555535 HIC1Q14526 733 aa10.53□□□□□ -0.72
SRP54-207ENST00000555535 MSS51Q4VC12 460 aa10.53□□□□□ -0.72
SRP54-207ENST00000555535 FAM160A2Q8N612 972 aaPredicted RBP10.53□□□□□ -0.72
SRP54-207ENST00000555535 FUT2Q10981 343 aa10.52□□□□□ -0.73
SRP54-207ENST00000555535 REPIN1Q9BWE0 567 aaKnown RBP10.52□□□□□ -0.73
SRP54-207ENST00000555535 SMPD1P17405 629 aa10.51□□□□□ -0.73
SRP54-207ENST00000555535 GRIPAP1Q4V328 841 aa10.51□□□□□ -0.73
SRP54-207ENST00000555535 SULF1Q8IWU6 871 aa10.51□□□□□ -0.73
SRP54-207ENST00000555535 SNRPBP14678 240 aaKnown RBP10.5□□□□□ -0.73
SRP54-207ENST00000555535 BRICD5Q6PL45 260 aa10.5□□□□□ -0.73
SRP54-207ENST00000555535 SLC27A5Q9Y2P5 690 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms