RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 SUZ12Q15022 739 aaKnown RBP9.3□□□□□ -0.92
KTN1-222ENST00000555506 NBPF26B4DH59 902 aa9.29□□□□□ -0.92
KTN1-222ENST00000555506 HIC1Q14526 733 aa9.29□□□□□ -0.92
KTN1-222ENST00000555506 FAM98CQ17RN3 349 aaKnown RBP9.29□□□□□ -0.92
KTN1-222ENST00000555506 FAM161AQ3B820 660 aa9.28□□□□□ -0.92
KTN1-222ENST00000555506 GNPATO15228 680 aa9.28□□□□□ -0.92
KTN1-222ENST00000555506 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.28□□□□□ -0.92
KTN1-222ENST00000555506 LRCH3Q96II8 777 aa9.27□□□□□ -0.93
KTN1-222ENST00000555506 HPS5Q9UPZ3 1129 aa9.27□□□□□ -0.93
KTN1-222ENST00000555506 EYA1Q99502 592 aa9.26□□□□□ -0.93
KTN1-222ENST00000555506 ADGRG1Q9Y653 693 aa9.26□□□□□ -0.93
KTN1-222ENST00000555506 INSM1Q01101 510 aaPredicted RBP9.25□□□□□ -0.93
KTN1-222ENST00000555506 PPP1R18Q6NYC8 613 aa9.25□□□□□ -0.93
KTN1-222ENST00000555506 PKDCCQ504Y2 493 aa9.24□□□□□ -0.93
KTN1-222ENST00000555506 POTECB2RU33 542 aa9.23□□□□□ -0.93
KTN1-222ENST00000555506 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.23□□□□□ -0.93
KTN1-222ENST00000555506 SAMD7Q7Z3H4 446 aa9.22□□□□□ -0.93
KTN1-222ENST00000555506 GGCXP38435 758 aa9.21□□□□□ -0.94
KTN1-222ENST00000555506 PPP4CP60510 307 aa9.21□□□□□ -0.94
KTN1-222ENST00000555506 RBM46Q8TBY0 533 aaKnown RBP9.21□□□□□ -0.94
KTN1-222ENST00000555506 ZC3H15Q8WU90 426 aaKnown RBP9.21□□□□□ -0.94
KTN1-222ENST00000555506 DGAT1O75907 488 aa9.2□□□□□ -0.94
KTN1-222ENST00000555506 PXYLP1Q8TE99 480 aa9.2□□□□□ -0.94
KTN1-222ENST00000555506 IL21Q9HBE4 155 aa9.2□□□□□ -0.94
KTN1-222ENST00000555506 WIPF1O43516 503 aa9.19□□□□□ -0.94
KTN1-222ENST00000555506 TJAP1Q5JTD0 557 aa9.19□□□□□ -0.94
KTN1-222ENST00000555506 RCCD1A6NED2 376 aa9.18□□□□□ -0.94
KTN1-222ENST00000555506 SWT1Q5T5J6 900 aaKnown RBP9.18□□□□□ -0.94
KTN1-222ENST00000555506 METTL3Q86U44 580 aaKnown RBP9.18□□□□□ -0.94
KTN1-222ENST00000555506 OATP04181 439 aa9.17□□□□□ -0.94
KTN1-222ENST00000555506 DNAJB2P25686 324 aa9.17□□□□□ -0.94
KTN1-222ENST00000555506 MYT1Q01538 1121 aa9.16□□□□□ -0.94
KTN1-222ENST00000555506 MAP2K5Q13163 448 aa9.16□□□□□ -0.94
KTN1-222ENST00000555506 PHOX2BQ99453 314 aa9.16□□□□□ -0.94
KTN1-222ENST00000555506 WFS1O76024 890 aa9.15□□□□□ -0.94
KTN1-222ENST00000555506 TMEM132AQ24JP5 1023 aa9.15□□□□□ -0.94
KTN1-222ENST00000555506 TMEM134Q9H6X4 195 aa9.15□□□□□ -0.94
KTN1-222ENST00000555506 HDGFP51858 240 aaKnown RBP9.15□□□□□ -0.95
KTN1-222ENST00000555506 NLRP7Q8WX94 980 aa9.15□□□□□ -0.95
KTN1-222ENST00000555506 IRF6O14896 467 aa9.14□□□□□ -0.95
KTN1-222ENST00000555506 RNF40O75150 1001 aa9.14□□□□□ -0.95
KTN1-222ENST00000555506 ZMYND10O75800 440 aa9.14□□□□□ -0.95
KTN1-222ENST00000555506 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.13□□□□□ -0.95
KTN1-222ENST00000555506 MTRQ99707 1265 aa9.13□□□□□ -0.95
KTN1-222ENST00000555506 MINK1Q8N4C8 1332 aaPredicted RBP9.12□□□□□ -0.95
KTN1-222ENST00000555506 BARGINQ6ZT62 677 aa9.12□□□□□ -0.95
KTN1-222ENST00000555506 CCDC102AQ96A19 550 aa9.12□□□□□ -0.95
KTN1-222ENST00000555506 SLF2Q8IX21 1173 aa9.1□□□□□ -0.95
KTN1-222ENST00000555506 SLC24A3Q9HC58 644 aa9.1□□□□□ -0.95
KTN1-222ENST00000555506 BRPF1P55201 1214 aaPredicted RBP9.09□□□□□ -0.95
KTN1-222ENST00000555506 TMUB1Q9BVT8 246 aa9.09□□□□□ -0.95
KTN1-222ENST00000555506 GTF3C3Q9Y5Q9 886 aa9.09□□□□□ -0.95
KTN1-222ENST00000555506 KRI1Q8N9T8 703 aaKnown RBP9.08□□□□□ -0.96
KTN1-222ENST00000555506 SLC10A3P09131 477 aa9.07□□□□□ -0.96
KTN1-222ENST00000555506 APLP1P51693 650 aa9.07□□□□□ -0.96
KTN1-222ENST00000555506 DAXXQ9UER7 740 aaPredicted RBP9.07□□□□□ -0.96
KTN1-222ENST00000555506 SLC4A3P48751 1232 aa9.05□□□□□ -0.96
KTN1-222ENST00000555506 PRR20EP86478 221 aa9.04□□□□□ -0.96
KTN1-222ENST00000555506 PRR20CP86479 221 aa9.04□□□□□ -0.96
KTN1-222ENST00000555506 PRR20DP86480 221 aa9.04□□□□□ -0.96
KTN1-222ENST00000555506 PRR20BP86481 221 aa9.04□□□□□ -0.96
KTN1-222ENST00000555506 PRR20AP86496 221 aa9.04□□□□□ -0.96
KTN1-222ENST00000555506 FAM181BA6NEQ2 426 aa9.03□□□□□ -0.96
KTN1-222ENST00000555506 MDM2Q00987 491 aaPredicted RBP9.03□□□□□ -0.96
KTN1-222ENST00000555506 NEUROD2Q15784 382 aa9.03□□□□□ -0.96
KTN1-222ENST00000555506 SLC19A1P41440 591 aa9.02□□□□□ -0.96
KTN1-222ENST00000555506 NECTIN2Q92692 538 aa9.02□□□□□ -0.96
KTN1-222ENST00000555506 FAM187AA6NFU0 413 aa9.02□□□□□ -0.97
KTN1-222ENST00000555506 DDX11L8A8MPP1 907 aa9.02□□□□□ -0.97
KTN1-222ENST00000555506 TRIM67Q6ZTA4 783 aa9.02□□□□□ -0.97
KTN1-222ENST00000555506 ZNF516Q92618 1163 aa9.02□□□□□ -0.97
KTN1-222ENST00000555506 CFHP08603 1231 aa9.01□□□□□ -0.97
KTN1-222ENST00000555506 NFX1Q12986 1120 aaKnown RBP9.01□□□□□ -0.97
KTN1-222ENST00000555506 REPIN1Q9BWE0 567 aaKnown RBP9.01□□□□□ -0.97
KTN1-222ENST00000555506 RDH13Q8NBN7 331 aa8.99□□□□□ -0.97
KTN1-222ENST00000555506 TIMELESSQ9UNS1 1208 aa8.99□□□□□ -0.97
KTN1-222ENST00000555506 ZNF598Q86UK7 904 aaKnown RBP8.98□□□□□ -0.97
KTN1-222ENST00000555506 AK7Q96M32 723 aa8.98□□□□□ -0.97
KTN1-222ENST00000555506 GPCPD1Q9NPB8 672 aa8.98□□□□□ -0.97
KTN1-222ENST00000555506 TRIM66O15016 1216 aa8.97□□□□□ -0.97
KTN1-222ENST00000555506 AMHR2Q16671 573 aa8.97□□□□□ -0.97
KTN1-222ENST00000555506 KMT5BQ4FZB7 885 aa8.97□□□□□ -0.97
KTN1-222ENST00000555506 ERICH6Q7L0X2 663 aa8.97□□□□□ -0.97
KTN1-222ENST00000555506 SULF1Q8IWU6 871 aa8.97□□□□□ -0.97
KTN1-222ENST00000555506 PRR14Q9BWN1 585 aa8.97□□□□□ -0.97
KTN1-222ENST00000555506 ACTN4O43707 911 aaKnown RBP8.96□□□□□ -0.97
KTN1-222ENST00000555506 CLCN1P35523 988 aa8.96□□□□□ -0.97
KTN1-222ENST00000555506 COPS2P61201 443 aa8.96□□□□□ -0.97
KTN1-222ENST00000555506 RSPH4AQ5TD94 716 aa8.96□□□□□ -0.97
KTN1-222ENST00000555506 CD46P15529 392 aa8.96□□□□□ -0.98
KTN1-222ENST00000555506 NKX2-3Q8TAU0 364 aa8.96□□□□□ -0.98
KTN1-222ENST00000555506 AAASQ9NRG9 546 aa8.96□□□□□ -0.98
KTN1-222ENST00000555506 PCDHB3Q9Y5E6 796 aa8.96□□□□□ -0.98
KTN1-222ENST00000555506 GCGRP47871 477 aa8.95□□□□□ -0.98
KTN1-222ENST00000555506 SPRYD7Q5W111 196 aa8.95□□□□□ -0.98
KTN1-222ENST00000555506 FAM217BQ9NTX9 383 aaPredicted RBP8.95□□□□□ -0.98
KTN1-222ENST00000555506 TTLL12Q14166 644 aaPredicted RBP8.94□□□□□ -0.98
KTN1-222ENST00000555506 BLOC1S3Q6QNY0 202 aa8.94□□□□□ -0.98
KTN1-222ENST00000555506 C11orf95C9JLR9 678 aaPredicted RBP8.92□□□□□ -0.98
KTN1-222ENST00000555506 ST8SIA5O15466 376 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms