RNA–Protein interactions for RNA: ENST00000554891.5

HNRNPC-213, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-213ENST00000554891 HSPA1LP34931 641 aa16.17■□□□□ 0.18
HNRNPC-213ENST00000554891 CHGAP10645 457 aaKnown RBP16.16■□□□□ 0.18
HNRNPC-213ENST00000554891 NUTM2DQ5VT03 806 aaPredicted RBP16.16■□□□□ 0.18
HNRNPC-213ENST00000554891 ZFYVE9O95405 1425 aa16.15■□□□□ 0.18
HNRNPC-213ENST00000554891 ILDR2Q71H61 639 aa16.15■□□□□ 0.18
HNRNPC-213ENST00000554891 RBM33Q96EV2 1170 aaKnown RBP16.15■□□□□ 0.18
HNRNPC-213ENST00000554891 RIMS2Q9UQ26 1411 aa16.14■□□□□ 0.17
HNRNPC-213ENST00000554891 NAIPQ13075 1403 aa16.13■□□□□ 0.17
HNRNPC-213ENST00000554891 BCANQ96GW7 911 aa16.13■□□□□ 0.17
HNRNPC-213ENST00000554891 KCNA6P17658 529 aa16.12■□□□□ 0.17
HNRNPC-213ENST00000554891 SPHKAPQ2M3C7 1700 aa16.09■□□□□ 0.17
HNRNPC-213ENST00000554891 CHD2O14647 1828 aaKnown RBP16.09■□□□□ 0.17
HNRNPC-213ENST00000554891 TMEM94Q12767 1356 aa16.09■□□□□ 0.17
HNRNPC-213ENST00000554891 PLEKHG1Q9ULL1 1385 aa16.09■□□□□ 0.17
HNRNPC-213ENST00000554891 PPP1R15AO75807 674 aaPredicted RBP16.08■□□□□ 0.16
HNRNPC-213ENST00000554891 PROSER2Q86WR7 435 aaPredicted RBP16.08■□□□□ 0.16
HNRNPC-213ENST00000554891 NWD1Q149M9 1564 aa16.06■□□□□ 0.16
HNRNPC-213ENST00000554891 ADAMTS13Q76LX8 1427 aa16.05■□□□□ 0.16
HNRNPC-213ENST00000554891 HDGFP51858 240 aaKnown RBP16.05■□□□□ 0.16
HNRNPC-213ENST00000554891 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.04■□□□□ 0.16
HNRNPC-213ENST00000554891 TRIM52Q96A61 297 aa16.04■□□□□ 0.16
HNRNPC-213ENST00000554891 TBX22Q9Y458 520 aa16.04■□□□□ 0.16
HNRNPC-213ENST00000554891 HFM1A2PYH4 1435 aa16.03■□□□□ 0.16
HNRNPC-213ENST00000554891 CLTCL1P53675 1640 aa16.03■□□□□ 0.16
HNRNPC-213ENST00000554891 NKTRP30414 1462 aaKnown RBP16.01■□□□□ 0.15
HNRNPC-213ENST00000554891 ZNF326Q5BKZ1 582 aaKnown RBP16■□□□□ 0.15
HNRNPC-213ENST00000554891 NRXN3Q9Y4C0 1643 aa16■□□□□ 0.15
HNRNPC-213ENST00000554891 PTPRUQ92729 1446 aa16■□□□□ 0.15
HNRNPC-213ENST00000554891 MED1Q15648 1581 aaPredicted RBP16■□□□□ 0.15
HNRNPC-213ENST00000554891 TRPM2O94759 1503 aa15.99■□□□□ 0.15
HNRNPC-213ENST00000554891 KIF1BO60333 1816 aa15.98■□□□□ 0.15
HNRNPC-213ENST00000554891 FOXD1Q16676 465 aa15.98■□□□□ 0.15
HNRNPC-213ENST00000554891 FAM135BQ49AJ0 1406 aa15.97■□□□□ 0.15
HNRNPC-213ENST00000554891 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
HNRNPC-213ENST00000554891 ROBO1Q9Y6N7 1651 aa15.97■□□□□ 0.15
HNRNPC-213ENST00000554891 NEXMIFQ5QGS0 1516 aa15.96■□□□□ 0.15
HNRNPC-213ENST00000554891 AMOTL2Q9Y2J4 779 aa15.96■□□□□ 0.15
HNRNPC-213ENST00000554891 DIP2AQ14689 1571 aa15.96■□□□□ 0.14
HNRNPC-213ENST00000554891 MSH6P52701 1360 aa15.95■□□□□ 0.14
HNRNPC-213ENST00000554891 SLAIN2Q9P270 581 aa15.94■□□□□ 0.14
HNRNPC-213ENST00000554891 METP08581 1390 aa15.94■□□□□ 0.14
HNRNPC-213ENST00000554891 SETBP1Q9Y6X0 1596 aa15.93■□□□□ 0.14
HNRNPC-213ENST00000554891 PIK3R4Q99570 1358 aa15.93■□□□□ 0.14
HNRNPC-213ENST00000554891 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.93■□□□□ 0.14
HNRNPC-213ENST00000554891 SOCS7O14512 581 aa15.91■□□□□ 0.14
HNRNPC-213ENST00000554891 C14orf37Q86TY3 774 aa15.91■□□□□ 0.14
HNRNPC-213ENST00000554891 XRN1Q8IZH2 1706 aaKnown RBP15.9■□□□□ 0.14
HNRNPC-213ENST00000554891 NCOA3Q9Y6Q9 1424 aa15.89■□□□□ 0.13
HNRNPC-213ENST00000554891 MPHOSPH9Q99550 1183 aa15.89■□□□□ 0.13
HNRNPC-213ENST00000554891 C19orf44Q9H6X5 657 aa15.88■□□□□ 0.13
HNRNPC-213ENST00000554891 PPLO60437 1756 aa15.87■□□□□ 0.13
HNRNPC-213ENST00000554891 RGS17Q9UGC6 210 aaPredicted RBP15.87■□□□□ 0.13
HNRNPC-213ENST00000554891 SETD1AO15047 1707 aaKnown RBP15.87■□□□□ 0.13
HNRNPC-213ENST00000554891 PHLPP1O60346 1717 aa15.87■□□□□ 0.13
HNRNPC-213ENST00000554891 VGFO15240 615 aaPredicted RBP15.85■□□□□ 0.13
HNRNPC-213ENST00000554891 ATF3P18847 181 aa15.85■□□□□ 0.13
HNRNPC-213ENST00000554891 RGL3Q3MIN7 710 aa15.85■□□□□ 0.13
HNRNPC-213ENST00000554891 PHF23Q9BUL5 403 aaPredicted RBP15.85■□□□□ 0.13
HNRNPC-213ENST00000554891 CADPS2Q86UW7 1296 aa15.84■□□□□ 0.13
HNRNPC-213ENST00000554891 SETD5Q9C0A6 1442 aa15.84■□□□□ 0.13
HNRNPC-213ENST00000554891 RPGRIP1LQ68CZ1 1315 aa15.83■□□□□ 0.12
HNRNPC-213ENST00000554891 ADGRF5Q8IZF2 1346 aa15.83■□□□□ 0.12
HNRNPC-213ENST00000554891 COL16A1Q07092 1604 aaPredicted RBP15.83■□□□□ 0.12
HNRNPC-213ENST00000554891 CCDC144AA2RUR9 1427 aa15.81■□□□□ 0.12
HNRNPC-213ENST00000554891 SPATA31E1Q6ZUB1 1445 aa15.81■□□□□ 0.12
HNRNPC-213ENST00000554891 BRINP3Q76B58 766 aa15.81■□□□□ 0.12
HNRNPC-213ENST00000554891 NALCNQ8IZF0 1738 aa15.81■□□□□ 0.12
HNRNPC-213ENST00000554891 RAB3GAP2Q9H2M9 1393 aa15.8■□□□□ 0.12
HNRNPC-213ENST00000554891 ROBO2Q9HCK4 1378 aa15.8■□□□□ 0.12
HNRNPC-213ENST00000554891 IFT172Q9UG01 1749 aa15.8■□□□□ 0.12
HNRNPC-213ENST00000554891 MST1RQ04912 1400 aa15.79■□□□□ 0.12
HNRNPC-213ENST00000554891 POTEDQ86YR6 584 aa15.78■□□□□ 0.12
HNRNPC-213ENST00000554891 ADGRL3Q9HAR2 1447 aa15.77■□□□□ 0.12
HNRNPC-213ENST00000554891 AHDC1Q5TGY3 1603 aaPredicted RBP15.77■□□□□ 0.12
HNRNPC-213ENST00000554891 DDX17Q92841 729 aaKnown RBP15.77■□□□□ 0.12
HNRNPC-213ENST00000554891 DCCP43146 1447 aa15.77■□□□□ 0.11
HNRNPC-213ENST00000554891 JCADQ9P266 1359 aa15.76■□□□□ 0.11
HNRNPC-213ENST00000554891 POTEAQ6S8J7 498 aa15.76■□□□□ 0.11
HNRNPC-213ENST00000554891 TMEM132EQ6IEE7 984 aa15.75■□□□□ 0.11
HNRNPC-213ENST00000554891 ASXL1Q8IXJ9 1541 aa15.74■□□□□ 0.11
HNRNPC-213ENST00000554891 STK26Q9P289 416 aa15.74■□□□□ 0.11
HNRNPC-213ENST00000554891 LRP6O75581 1613 aa15.74■□□□□ 0.11
HNRNPC-213ENST00000554891 PTCH1Q13635 1447 aa15.74■□□□□ 0.11
HNRNPC-213ENST00000554891 NHSL1Q5SYE7 1610 aa15.72■□□□□ 0.11
HNRNPC-213ENST00000554891 WAPLQ7Z5K2 1190 aa15.72■□□□□ 0.11
HNRNPC-213ENST00000554891 ORAI2Q96SN7 254 aa15.72■□□□□ 0.11
HNRNPC-213ENST00000554891 C1orf167Q5SNV9 1468 aa15.71■□□□□ 0.11
HNRNPC-213ENST00000554891 PRAG1Q86YV5 1406 aa15.71■□□□□ 0.11
HNRNPC-213ENST00000554891 SHPRHQ149N8 1683 aa15.71■□□□□ 0.11
HNRNPC-213ENST00000554891 ANKRD30BQ9BXX2 1392 aa15.71■□□□□ 0.11
HNRNPC-213ENST00000554891 PIK3C2GO75747 1445 aa15.69■□□□□ 0.1
HNRNPC-213ENST00000554891 PLEKHH1Q9ULM0 1364 aa15.69■□□□□ 0.1
HNRNPC-213ENST00000554891 NUTM2BA6NNL0 878 aaPredicted RBP15.68■□□□□ 0.1
HNRNPC-213ENST00000554891 NUTM2EB1AL46 878 aaPredicted RBP15.68■□□□□ 0.1
HNRNPC-213ENST00000554891 CFAP70Q5T0N1 1121 aa15.68■□□□□ 0.1
HNRNPC-213ENST00000554891 NUTM2AQ8IVF1 878 aaPredicted RBP15.68■□□□□ 0.1
HNRNPC-213ENST00000554891 SPATA31A6Q5VVP1 1343 aa15.68■□□□□ 0.1
HNRNPC-213ENST00000554891 LRPPRCP42704 1394 aaKnown RBP15.67■□□□□ 0.1
HNRNPC-213ENST00000554891 C14orf93Q9H972 538 aaKnown RBP15.67■□□□□ 0.1
HNRNPC-213ENST00000554891 ACIN1Q9UKV3 1341 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms