RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 AMHR2Q16671 573 aa9.21□□□□□ -0.94
SCFD1-214ENST00000554819 SWT1Q5T5J6 900 aaKnown RBP9.21□□□□□ -0.94
SCFD1-214ENST00000554819 SLF2Q8IX21 1173 aa9.21□□□□□ -0.94
SCFD1-214ENST00000554819 NECTIN2Q92692 538 aa9.21□□□□□ -0.94
SCFD1-214ENST00000554819 KCTD12Q96CX2 325 aaKnown RBP9.21□□□□□ -0.94
SCFD1-214ENST00000554819 DAXXQ9UER7 740 aaPredicted RBP9.21□□□□□ -0.94
SCFD1-214ENST00000554819 SOWAHBA6NEL2 793 aa9.2□□□□□ -0.94
SCFD1-214ENST00000554819 RSPH4AQ5TD94 716 aa9.2□□□□□ -0.94
SCFD1-214ENST00000554819 RNF166Q96A37 237 aaPredicted RBP9.2□□□□□ -0.94
SCFD1-214ENST00000554819 MDM2Q00987 491 aaPredicted RBP9.19□□□□□ -0.94
SCFD1-214ENST00000554819 GPCPD1Q9NPB8 672 aa9.19□□□□□ -0.94
SCFD1-214ENST00000554819 PDE4DQ08499 809 aa9.18□□□□□ -0.94
SCFD1-214ENST00000554819 TTLL12Q14166 644 aaPredicted RBP9.18□□□□□ -0.94
SCFD1-214ENST00000554819 THSD4Q6ZMP0 1018 aa9.18□□□□□ -0.94
SCFD1-214ENST00000554819 SULF1Q8IWU6 871 aa9.18□□□□□ -0.94
SCFD1-214ENST00000554819 TSR3Q9UJK0 312 aaKnown RBP9.17□□□□□ -0.94
SCFD1-214ENST00000554819 RNF40O75150 1001 aa9.16□□□□□ -0.94
SCFD1-214ENST00000554819 BCAMP50895 628 aa9.16□□□□□ -0.94
SCFD1-214ENST00000554819 PPP4CP60510 307 aa9.16□□□□□ -0.94
SCFD1-214ENST00000554819 NLRP7Q8WX94 980 aa9.16□□□□□ -0.94
SCFD1-214ENST00000554819 HPS5Q9UPZ3 1129 aa9.15□□□□□ -0.94
SCFD1-214ENST00000554819 TMUB1Q9BVT8 246 aa9.14□□□□□ -0.95
SCFD1-214ENST00000554819 DDX11L8A8MPP1 907 aa9.13□□□□□ -0.95
SCFD1-214ENST00000554819 PTPN5P54829 565 aa9.13□□□□□ -0.95
SCFD1-214ENST00000554819 NYAP1Q6ZVC0 841 aa9.13□□□□□ -0.95
SCFD1-214ENST00000554819 HCSTQ9UBK5 93 aa9.13□□□□□ -0.95
SCFD1-214ENST00000554819 GIGYF2Q6Y7W6 1299 aaKnown RBP9.12□□□□□ -0.95
SCFD1-214ENST00000554819 PARP9Q8IXQ6 854 aa9.12□□□□□ -0.95
SCFD1-214ENST00000554819 RDH13Q8NBN7 331 aa9.12□□□□□ -0.95
SCFD1-214ENST00000554819 FAM217BQ9NTX9 383 aaPredicted RBP9.12□□□□□ -0.95
SCFD1-214ENST00000554819 SSTR3P32745 418 aaPredicted RBP9.11□□□□□ -0.95
SCFD1-214ENST00000554819 REPIN1Q9BWE0 567 aaKnown RBP9.11□□□□□ -0.95
SCFD1-214ENST00000554819 PRR14Q9BWN1 585 aa9.11□□□□□ -0.95
SCFD1-214ENST00000554819 WBP1LQ9NX94 342 aa9.1□□□□□ -0.95
SCFD1-214ENST00000554819 SLC10A3P09131 477 aa9.09□□□□□ -0.95
SCFD1-214ENST00000554819 CD46P15529 392 aa9.09□□□□□ -0.95
SCFD1-214ENST00000554819 KMT5BQ4FZB7 885 aa9.09□□□□□ -0.95
SCFD1-214ENST00000554819 NEUROD2Q15784 382 aa9.08□□□□□ -0.96
SCFD1-214ENST00000554819 CFHP08603 1231 aa9.07□□□□□ -0.96
SCFD1-214ENST00000554819 KDM4CQ9H3R0 1056 aa9.07□□□□□ -0.96
SCFD1-214ENST00000554819 GCGRP47871 477 aa9.06□□□□□ -0.96
SCFD1-214ENST00000554819 BRPF1P55201 1214 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-214ENST00000554819 GPBP1L1Q9HC44 474 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-214ENST00000554819 MS4A1P11836 297 aa9.04□□□□□ -0.96
SCFD1-214ENST00000554819 BEGAINQ9BUH8 593 aa9.04□□□□□ -0.96
SCFD1-214ENST00000554819 ACTN4O43707 911 aaKnown RBP9.03□□□□□ -0.96
SCFD1-214ENST00000554819 APLP1P51693 650 aa9.03□□□□□ -0.96
SCFD1-214ENST00000554819 DIXDC1Q155Q3 683 aa9.03□□□□□ -0.96
SCFD1-214ENST00000554819 GRIPAP1Q4V328 841 aa9.03□□□□□ -0.96
SCFD1-214ENST00000554819 NUTM1Q86Y26 1132 aa9.03□□□□□ -0.96
SCFD1-214ENST00000554819 DDRGK1Q96HY6 314 aa9.02□□□□□ -0.97
SCFD1-214ENST00000554819 KDM4AO75164 1064 aa9.01□□□□□ -0.97
SCFD1-214ENST00000554819 USP46P62068 366 aa9.01□□□□□ -0.97
SCFD1-214ENST00000554819 ATP6V1AP38606 617 aa9□□□□□ -0.97
SCFD1-214ENST00000554819 PCDHB3Q9Y5E6 796 aa9□□□□□ -0.97
SCFD1-214ENST00000554819 FUT2Q10981 343 aa8.98□□□□□ -0.97
SCFD1-214ENST00000554819 RSPH6AQ9H0K4 717 aa8.98□□□□□ -0.97
SCFD1-214ENST00000554819 SPIRE2Q8WWL2 714 aa8.97□□□□□ -0.97
SCFD1-214ENST00000554819 FAM117AQ9C073 453 aa8.97□□□□□ -0.97
SCFD1-214ENST00000554819 NR1I2O75469 434 aa8.95□□□□□ -0.98
SCFD1-214ENST00000554819 TBC1D2Q9BYX2 928 aa8.95□□□□□ -0.98
SCFD1-214ENST00000554819 IL21Q9HBE4 155 aa8.95□□□□□ -0.98
SCFD1-214ENST00000554819 HOXA2O43364 376 aa8.94□□□□□ -0.98
SCFD1-214ENST00000554819 PUS10Q3MIT2 529 aaKnown RBP8.94□□□□□ -0.98
SCFD1-214ENST00000554819 MORN1Q5T089 497 aa8.94□□□□□ -0.98
SCFD1-214ENST00000554819 BLOC1S3Q6QNY0 202 aa8.94□□□□□ -0.98
SCFD1-214ENST00000554819 IL27Q8NEV9 243 aa8.94□□□□□ -0.98
SCFD1-214ENST00000554819 MTRQ99707 1265 aa8.94□□□□□ -0.98
SCFD1-214ENST00000554819 COPS2P61201 443 aa8.93□□□□□ -0.98
SCFD1-214ENST00000554819 KCNC4Q03721 635 aa8.93□□□□□ -0.98
SCFD1-214ENST00000554819 TJAP1Q5JTD0 557 aa8.93□□□□□ -0.98
SCFD1-214ENST00000554819 ITGBL1O95965 494 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-214ENST00000554819 GJA5P36382 358 aa8.92□□□□□ -0.98
SCFD1-214ENST00000554819 SCUBE3Q8IX30 993 aa8.92□□□□□ -0.98
SCFD1-214ENST00000554819 PLEKHG3A1L390 1219 aa8.91□□□□□ -0.98
SCFD1-214ENST00000554819 ZPR1O75312 459 aa8.91□□□□□ -0.98
SCFD1-214ENST00000554819 Q3C1V9 767 aa8.91□□□□□ -0.98
SCFD1-214ENST00000554819 SLC27A5Q9Y2P5 690 aa8.91□□□□□ -0.98
SCFD1-214ENST00000554819 MOXD2PA6NHM9 499 aa8.9□□□□□ -0.98
SCFD1-214ENST00000554819 FDX1P10109 184 aa8.9□□□□□ -0.98
SCFD1-214ENST00000554819 MYSM1Q5VVJ2 828 aa8.9□□□□□ -0.98
SCFD1-214ENST00000554819 RIC3Q7Z5B4 369 aa8.9□□□□□ -0.98
SCFD1-214ENST00000554819 SALL2Q9Y467 1007 aaPredicted RBP8.9□□□□□ -0.98
SCFD1-214ENST00000554819 NDUFV2P19404 249 aa8.89□□□□□ -0.99
SCFD1-214ENST00000554819 SKIV2LQ15477 1246 aaKnown RBP8.89□□□□□ -0.99
SCFD1-214ENST00000554819 SH3D19Q5HYK7 790 aa8.89□□□□□ -0.99
SCFD1-214ENST00000554819 RSBN1LQ6PCB5 846 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-214ENST00000554819 SPTLC1O15269 473 aa8.88□□□□□ -0.99
SCFD1-214ENST00000554819 FMNL1O95466 1100 aaPredicted RBP8.88□□□□□ -0.99
SCFD1-214ENST00000554819 IFFO2Q5TF58 517 aa8.88□□□□□ -0.99
SCFD1-214ENST00000554819 GOPCQ9HD26 462 aa8.88□□□□□ -0.99
SCFD1-214ENST00000554819 PLA2G2EQ9NZK7 142 aa8.88□□□□□ -0.99
SCFD1-214ENST00000554819 TUSC1Q2TAM9 212 aa8.87□□□□□ -0.99
SCFD1-214ENST00000554819 ZNF516Q92618 1163 aa8.87□□□□□ -0.99
SCFD1-214ENST00000554819 HLA-CQ95604 372 aa8.87□□□□□ -0.99
SCFD1-214ENST00000554819 CLK2P49760 499 aaKnown RBP8.86□□□□□ -0.99
SCFD1-214ENST00000554819 POLR3EQ9NVU0 708 aa8.86□□□□□ -0.99
SCFD1-214ENST00000554819 ATP1B4Q9UN42 357 aaPredicted RBP8.86□□□□□ -0.99
SCFD1-214ENST00000554819 GUCA2AQ02747 115 aa8.85□□□□□ -0.99
SCFD1-214ENST00000554819 BRICD5Q6PL45 260 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms