RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
ABCD4-221ENST00000554453 RIMS2Q9UQ26 1411 aa16.85■□□□□ 0.29
ABCD4-221ENST00000554453 PPP1R15AO75807 674 aaPredicted RBP16.84■□□□□ 0.29
ABCD4-221ENST00000554453 ILDR2Q71H61 639 aa16.84■□□□□ 0.29
ABCD4-221ENST00000554453 ZFYVE9O95405 1425 aa16.84■□□□□ 0.29
ABCD4-221ENST00000554453 IQGAP3Q86VI3 1631 aa16.84■□□□□ 0.29
ABCD4-221ENST00000554453 E9PCH4 1651 aa16.83■□□□□ 0.28
ABCD4-221ENST00000554453 PLEKHG1Q9ULL1 1385 aa16.83■□□□□ 0.28
ABCD4-221ENST00000554453 ALKQ9UM73 1620 aa16.83■□□□□ 0.28
ABCD4-221ENST00000554453 MYO5BQ9ULV0 1848 aa16.82■□□□□ 0.28
ABCD4-221ENST00000554453 TMEM131LA2VDJ0 1609 aa16.81■□□□□ 0.28
ABCD4-221ENST00000554453 TMEM94Q12767 1356 aa16.8■□□□□ 0.28
ABCD4-221ENST00000554453 NUTM2DQ5VT03 806 aaPredicted RBP16.8■□□□□ 0.28
ABCD4-221ENST00000554453 NAIPQ13075 1403 aa16.79■□□□□ 0.28
ABCD4-221ENST00000554453 SENP3Q9H4L4 574 aaPredicted RBP16.79■□□□□ 0.28
ABCD4-221ENST00000554453 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.28
ABCD4-221ENST00000554453 RBM33Q96EV2 1170 aaKnown RBP16.77■□□□□ 0.28
ABCD4-221ENST00000554453 TRIM52Q96A61 297 aa16.76■□□□□ 0.27
ABCD4-221ENST00000554453 FAM135BQ49AJ0 1406 aa16.76■□□□□ 0.27
ABCD4-221ENST00000554453 ADAMTS13Q76LX8 1427 aa16.74■□□□□ 0.27
ABCD4-221ENST00000554453 CHD2O14647 1828 aaKnown RBP16.74■□□□□ 0.27
ABCD4-221ENST00000554453 HFM1A2PYH4 1435 aa16.73■□□□□ 0.27
ABCD4-221ENST00000554453 SOCS7O14512 581 aa16.73■□□□□ 0.27
ABCD4-221ENST00000554453 PIK3R4Q99570 1358 aa16.73■□□□□ 0.27
ABCD4-221ENST00000554453 NKTRP30414 1462 aaKnown RBP16.73■□□□□ 0.27
ABCD4-221ENST00000554453 ZNF326Q5BKZ1 582 aaKnown RBP16.72■□□□□ 0.27
ABCD4-221ENST00000554453 SLAIN2Q9P270 581 aa16.72■□□□□ 0.27
ABCD4-221ENST00000554453 NCOA3Q9Y6Q9 1424 aa16.71■□□□□ 0.27
ABCD4-221ENST00000554453 SLC4A1APQ9BWU0 796 aaKnown RBP16.71■□□□□ 0.27
ABCD4-221ENST00000554453 AMOTL2Q9Y2J4 779 aa16.71■□□□□ 0.27
ABCD4-221ENST00000554453 NWD1Q149M9 1564 aa16.7■□□□□ 0.26
ABCD4-221ENST00000554453 MSH6P52701 1360 aa16.7■□□□□ 0.26
ABCD4-221ENST00000554453 C19orf44Q9H6X5 657 aa16.69■□□□□ 0.26
ABCD4-221ENST00000554453 SPHKAPQ2M3C7 1700 aa16.67■□□□□ 0.26
ABCD4-221ENST00000554453 VGFO15240 615 aaPredicted RBP16.65■□□□□ 0.26
ABCD4-221ENST00000554453 C14orf37Q86TY3 774 aa16.65■□□□□ 0.26
ABCD4-221ENST00000554453 CADPS2Q86UW7 1296 aa16.65■□□□□ 0.26
ABCD4-221ENST00000554453 RPGRIP1LQ68CZ1 1315 aa16.65■□□□□ 0.26
ABCD4-221ENST00000554453 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
ABCD4-221ENST00000554453 PTPRUQ92729 1446 aa16.64■□□□□ 0.25
ABCD4-221ENST00000554453 MED1Q15648 1581 aaPredicted RBP16.64■□□□□ 0.25
ABCD4-221ENST00000554453 ATF3P18847 181 aa16.63■□□□□ 0.25
ABCD4-221ENST00000554453 TRPM2O94759 1503 aa16.62■□□□□ 0.25
ABCD4-221ENST00000554453 MPHOSPH9Q99550 1183 aa16.62■□□□□ 0.25
ABCD4-221ENST00000554453 PHF23Q9BUL5 403 aaPredicted RBP16.62■□□□□ 0.25
ABCD4-221ENST00000554453 ACIN1Q9UKV3 1341 aaKnown RBP16.62■□□□□ 0.25
ABCD4-221ENST00000554453 METP08581 1390 aa16.61■□□□□ 0.25
ABCD4-221ENST00000554453 KIF1BO60333 1816 aa16.61■□□□□ 0.25
ABCD4-221ENST00000554453 CLTCL1P53675 1640 aa16.6■□□□□ 0.25
ABCD4-221ENST00000554453 FOXD1Q16676 465 aa16.6■□□□□ 0.25
ABCD4-221ENST00000554453 SETBP1Q9Y6X0 1596 aa16.6■□□□□ 0.25
ABCD4-221ENST00000554453 NEXMIFQ5QGS0 1516 aa16.58■□□□□ 0.24
ABCD4-221ENST00000554453 ROBO1Q9Y6N7 1651 aa16.58■□□□□ 0.24
ABCD4-221ENST00000554453 NRXN3Q9Y4C0 1643 aa16.57■□□□□ 0.24
ABCD4-221ENST00000554453 RGS17Q9UGC6 210 aaPredicted RBP16.57■□□□□ 0.24
ABCD4-221ENST00000554453 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.56■□□□□ 0.24
ABCD4-221ENST00000554453 SETD5Q9C0A6 1442 aa16.53■□□□□ 0.24
ABCD4-221ENST00000554453 RGL3Q3MIN7 710 aa16.53■□□□□ 0.24
ABCD4-221ENST00000554453 BRINP3Q76B58 766 aa16.53■□□□□ 0.24
ABCD4-221ENST00000554453 JCADQ9P266 1359 aa16.52■□□□□ 0.24
ABCD4-221ENST00000554453 DCCP43146 1447 aa16.52■□□□□ 0.23
ABCD4-221ENST00000554453 XRN1Q8IZH2 1706 aaKnown RBP16.51■□□□□ 0.23
ABCD4-221ENST00000554453 CCDC144AA2RUR9 1427 aa16.51■□□□□ 0.23
ABCD4-221ENST00000554453 ADGRF5Q8IZF2 1346 aa16.5■□□□□ 0.23
ABCD4-221ENST00000554453 PHLPP1O60346 1717 aa16.49■□□□□ 0.23
ABCD4-221ENST00000554453 SPATA31E1Q6ZUB1 1445 aa16.48■□□□□ 0.23
ABCD4-221ENST00000554453 ANKRD30BQ9BXX2 1392 aa16.48■□□□□ 0.23
ABCD4-221ENST00000554453 HRCP23327 699 aa16.47■□□□□ 0.23
ABCD4-221ENST00000554453 POTEAQ6S8J7 498 aa16.47■□□□□ 0.23
ABCD4-221ENST00000554453 ROBO2Q9HCK4 1378 aa16.47■□□□□ 0.23
ABCD4-221ENST00000554453 SPATA31A6Q5VVP1 1343 aa16.46■□□□□ 0.23
ABCD4-221ENST00000554453 PPLO60437 1756 aa16.46■□□□□ 0.23
ABCD4-221ENST00000554453 MST1RQ04912 1400 aa16.46■□□□□ 0.23
ABCD4-221ENST00000554453 ADGRL3Q9HAR2 1447 aa16.46■□□□□ 0.23
ABCD4-221ENST00000554453 LRRC59Q96AG4 307 aaKnown RBP16.45■□□□□ 0.22
ABCD4-221ENST00000554453 PTCH1Q13635 1447 aa16.45■□□□□ 0.22
ABCD4-221ENST00000554453 RAB3GAP2Q9H2M9 1393 aa16.44■□□□□ 0.22
ABCD4-221ENST00000554453 COL16A1Q07092 1604 aaPredicted RBP16.44■□□□□ 0.22
ABCD4-221ENST00000554453 AHDC1Q5TGY3 1603 aaPredicted RBP16.44■□□□□ 0.22
ABCD4-221ENST00000554453 PRAG1Q86YV5 1406 aa16.44■□□□□ 0.22
ABCD4-221ENST00000554453 SETD1AO15047 1707 aaKnown RBP16.42■□□□□ 0.22
ABCD4-221ENST00000554453 C14orf93Q9H972 538 aaKnown RBP16.42■□□□□ 0.22
ABCD4-221ENST00000554453 ABCC11Q96J66 1382 aa16.41■□□□□ 0.22
ABCD4-221ENST00000554453 TMEM132EQ6IEE7 984 aa16.41■□□□□ 0.22
ABCD4-221ENST00000554453 SIRT1Q96EB6 747 aa16.41■□□□□ 0.22
ABCD4-221ENST00000554453 ORAI2Q96SN7 254 aa16.41■□□□□ 0.22
ABCD4-221ENST00000554453 STK26Q9P289 416 aa16.41■□□□□ 0.22
ABCD4-221ENST00000554453 C1orf167Q5SNV9 1468 aa16.41■□□□□ 0.22
ABCD4-221ENST00000554453 WAPLQ7Z5K2 1190 aa16.4■□□□□ 0.22
ABCD4-221ENST00000554453 DDX17Q92841 729 aaKnown RBP16.4■□□□□ 0.22
ABCD4-221ENST00000554453 LRPPRCP42704 1394 aaKnown RBP16.39■□□□□ 0.21
ABCD4-221ENST00000554453 ASXL1Q8IXJ9 1541 aa16.39■□□□□ 0.21
ABCD4-221ENST00000554453 MEX3CQ5U5Q3 659 aaKnown RBP16.38■□□□□ 0.21
ABCD4-221ENST00000554453 NUTM2BA6NNL0 878 aaPredicted RBP16.37■□□□□ 0.21
ABCD4-221ENST00000554453 NUTM2EB1AL46 878 aaPredicted RBP16.37■□□□□ 0.21
ABCD4-221ENST00000554453 ZNF772Q68DY9 489 aaPredicted RBP16.37■□□□□ 0.21
ABCD4-221ENST00000554453 NUTM2AQ8IVF1 878 aaPredicted RBP16.37■□□□□ 0.21
ABCD4-221ENST00000554453 CFAP70Q5T0N1 1121 aa16.36■□□□□ 0.21
ABCD4-221ENST00000554453 SOS2Q07890 1332 aaPredicted RBP16.36■□□□□ 0.21
ABCD4-221ENST00000554453 NALCNQ8IZF0 1738 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms