RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 SPTLC1O15269 473 aa8.39□□□□□ -1.07
PABPN1-204ENST00000554062 POTEJP0CG39 1038 aa8.39□□□□□ -1.07
PABPN1-204ENST00000554062 CD46P15529 392 aa8.39□□□□□ -1.07
PABPN1-204ENST00000554062 ARSIQ5FYB1 569 aa8.39□□□□□ -1.07
PABPN1-204ENST00000554062 RIC3Q7Z5B4 369 aa8.39□□□□□ -1.07
PABPN1-204ENST00000554062 USP46P62068 366 aa8.38□□□□□ -1.07
PABPN1-204ENST00000554062 FNBP4Q8N3X1 1017 aaPredicted RBP8.38□□□□□ -1.07
PABPN1-204ENST00000554062 EYA1Q99502 592 aa8.38□□□□□ -1.07
PABPN1-204ENST00000554062 HOXB3P14651 431 aaPredicted RBP8.37□□□□□ -1.07
PABPN1-204ENST00000554062 SLC4A3P48751 1232 aa8.37□□□□□ -1.07
PABPN1-204ENST00000554062 GPR153Q6NV75 609 aa8.37□□□□□ -1.07
PABPN1-204ENST00000554062 SPIRE2Q8WWL2 714 aa8.37□□□□□ -1.07
PABPN1-204ENST00000554062 NLRP7Q8WX94 980 aa8.37□□□□□ -1.07
PABPN1-204ENST00000554062 TMEM134Q9H6X4 195 aa8.37□□□□□ -1.07
PABPN1-204ENST00000554062 COG6Q9Y2V7 657 aa8.36□□□□□ -1.07
PABPN1-204ENST00000554062 ZBTB7CA1YPR0 619 aa8.35□□□□□ -1.07
PABPN1-204ENST00000554062 TRIM6-TRIM34B2RNG4 842 aa8.35□□□□□ -1.07
PABPN1-204ENST00000554062 PRPF38BQ5VTL8 546 aaKnown RBP8.35□□□□□ -1.07
PABPN1-204ENST00000554062 RSBN1LQ6PCB5 846 aaPredicted RBP8.35□□□□□ -1.07
PABPN1-204ENST00000554062 DDX11L8A8MPP1 907 aa8.34□□□□□ -1.07
PABPN1-204ENST00000554062 NUDT18Q6ZVK8 323 aa8.34□□□□□ -1.07
PABPN1-204ENST00000554062 PNMA3Q9UL41 463 aa8.34□□□□□ -1.07
PABPN1-204ENST00000554062 LHX6Q9UPM6 363 aa8.34□□□□□ -1.07
PABPN1-204ENST00000554062 PDE4CQ08493 712 aa8.33□□□□□ -1.08
PABPN1-204ENST00000554062 TATDN2Q93075 761 aa8.33□□□□□ -1.08
PABPN1-204ENST00000554062 LIMD1Q9UGP4 676 aa8.33□□□□□ -1.08
PABPN1-204ENST00000554062 ZNF330Q9Y3S2 320 aaPredicted RBP8.33□□□□□ -1.08
PABPN1-204ENST00000554062 POM121Q96HA1 1249 aa8.32□□□□□ -1.08
PABPN1-204ENST00000554062 ZNF777Q9ULD5 760 aaPredicted RBP8.32□□□□□ -1.08
PABPN1-204ENST00000554062 KDM4AO75164 1064 aa8.31□□□□□ -1.08
PABPN1-204ENST00000554062 COL9A1P20849 921 aa8.31□□□□□ -1.08
PABPN1-204ENST00000554062 RDH13Q8NBN7 331 aa8.31□□□□□ -1.08
PABPN1-204ENST00000554062 ZBTB3Q9H5J0 574 aa8.31□□□□□ -1.08
PABPN1-204ENST00000554062 PLSCR2Q9NRY7 297 aa8.31□□□□□ -1.08
PABPN1-204ENST00000554062 TSKSQ9UJT2 592 aa8.31□□□□□ -1.08
PABPN1-204ENST00000554062 LILRB3O75022 631 aa8.3□□□□□ -1.08
PABPN1-204ENST00000554062 KHSRPQ92945 711 aaKnown RBP eCLIP8.3□□□□□ -1.084e-11■■□□□ 13.9
PABPN1-204ENST00000554062 SNRKQ9NRH2 765 aa8.3□□□□□ -1.08
PABPN1-204ENST00000554062 FAM198AQ9UFP1 575 aa8.3□□□□□ -1.08
PABPN1-204ENST00000554062 NUTM2BA6NNL0 878 aaPredicted RBP8.29□□□□□ -1.08
PABPN1-204ENST00000554062 NUTM2EB1AL46 878 aaPredicted RBP8.29□□□□□ -1.08
PABPN1-204ENST00000554062 PPP1R15AO75807 674 aaPredicted RBP8.29□□□□□ -1.08
PABPN1-204ENST00000554062 RANGAP1P46060 587 aaPredicted RBP8.29□□□□□ -1.08
PABPN1-204ENST00000554062 HDGFP51858 240 aaKnown RBP8.29□□□□□ -1.08
PABPN1-204ENST00000554062 GRIPAP1Q4V328 841 aa8.29□□□□□ -1.08
PABPN1-204ENST00000554062 NUTM2DQ5VT03 806 aaPredicted RBP8.29□□□□□ -1.08
PABPN1-204ENST00000554062 NUTM2AQ8IVF1 878 aaPredicted RBP8.29□□□□□ -1.08
PABPN1-204ENST00000554062 KCTD17Q8N5Z5 321 aa8.29□□□□□ -1.08
PABPN1-204ENST00000554062 MTMR14Q8NCE2 650 aa8.29□□□□□ -1.08
PABPN1-204ENST00000554062 MOXD2PA6NHM9 499 aa8.28□□□□□ -1.08
PABPN1-204ENST00000554062 HOXB1P14653 301 aaPredicted RBP8.28□□□□□ -1.08
PABPN1-204ENST00000554062 POTEMA6NI47 508 aa8.27□□□□□ -1.09
PABPN1-204ENST00000554062 AP1G2O75843 785 aa8.27□□□□□ -1.09
PABPN1-204ENST00000554062 TRIM26Q12899 539 aaPredicted RBP8.27□□□□□ -1.09
PABPN1-204ENST00000554062 HELBQ8NG08 1087 aaPredicted RBP8.27□□□□□ -1.09
PABPN1-204ENST00000554062 NECTIN2Q92692 538 aa8.27□□□□□ -1.09
PABPN1-204ENST00000554062 NDUFB9Q9Y6M9 179 aa8.27□□□□□ -1.09
PABPN1-204ENST00000554062 USP17L8P0C7I0 530 aa8.26□□□□□ -1.09
PABPN1-204ENST00000554062 WASHC4Q2M389 1173 aa8.26□□□□□ -1.09
PABPN1-204ENST00000554062 TRAIPQ9BWF2 469 aa8.26□□□□□ -1.09
PABPN1-204ENST00000554062 GDPD2Q9HCC8 539 aa8.26□□□□□ -1.09
PABPN1-204ENST00000554062 HOXA2O43364 376 aa8.25□□□□□ -1.09
PABPN1-204ENST00000554062 FDX1P10109 184 aa8.25□□□□□ -1.09
PABPN1-204ENST00000554062 GCGRP47871 477 aa8.25□□□□□ -1.09
PABPN1-204ENST00000554062 CSPP1Q1MSJ5 1256 aa8.25□□□□□ -1.09
PABPN1-204ENST00000554062 CALR3Q96L12 384 aaKnown RBP8.25□□□□□ -1.09
PABPN1-204ENST00000554062 CCDC9Q9Y3X0 531 aaKnown RBP8.25□□□□□ -1.09
PABPN1-204ENST00000554062 ABL2P42684 1182 aa8.24□□□□□ -1.09
PABPN1-204ENST00000554062 POTEGQ6S5H5 508 aa8.24□□□□□ -1.09
PABPN1-204ENST00000554062 SLF2Q8IX21 1173 aa8.24□□□□□ -1.09
PABPN1-204ENST00000554062 KCNK17Q96T54 332 aa8.24□□□□□ -1.09
PABPN1-204ENST00000554062 SLC4A5Q9BY07 1137 aa8.24□□□□□ -1.09
PABPN1-204ENST00000554062 PATL2C9JE40 543 aaKnown RBP8.23□□□□□ -1.09
PABPN1-204ENST00000554062 QPCTQ16769 361 aa8.23□□□□□ -1.09
PABPN1-204ENST00000554062 RABGEF1Q9UJ41 708 aa8.23□□□□□ -1.09
PABPN1-204ENST00000554062 PNMA1Q8ND90 353 aa8.22□□□□□ -1.09
PABPN1-204ENST00000554062 NDUFV2P19404 249 aa8.21□□□□□ -1.1
PABPN1-204ENST00000554062 HRCP23327 699 aa8.21□□□□□ -1.1
PABPN1-204ENST00000554062 PBX2P40425 430 aa8.21□□□□□ -1.1
PABPN1-204ENST00000554062 MTMR2Q13614 643 aa8.21□□□□□ -1.1
PABPN1-204ENST00000554062 LCE2DQ5TA82 110 aaPredicted RBP8.21□□□□□ -1.1
PABPN1-204ENST00000554062 ZBED2Q9BTP6 218 aa8.21□□□□□ -1.1
PABPN1-204ENST00000554062 KIAA1468Q9P260 1216 aa8.21□□□□□ -1.1
PABPN1-204ENST00000554062 ACIN1Q9UKV3 1341 aaKnown RBP8.21□□□□□ -1.1
PABPN1-204ENST00000554062 FAM98CQ17RN3 349 aaKnown RBP8.2□□□□□ -1.1
PABPN1-204ENST00000554062 PROX2Q3B8N5 592 aa8.2□□□□□ -1.1
PABPN1-204ENST00000554062 RTL5Q5HYW3 569 aaPredicted RBP8.2□□□□□ -1.1
PABPN1-204ENST00000554062 GLMNQ92990 594 aa8.2□□□□□ -1.1
PABPN1-204ENST00000554062 TBC1D2BQ9UPU7 963 aa8.2□□□□□ -1.1
PABPN1-204ENST00000554062 PCDHB15Q9Y5E8 787 aa8.2□□□□□ -1.1
PABPN1-204ENST00000554062 SOX11P35716 441 aa8.19□□□□□ -1.1
PABPN1-204ENST00000554062 LAPTM4BQ86VI4 370 aa8.19□□□□□ -1.1
PABPN1-204ENST00000554062 NBPF3Q9H094 633 aa8.19□□□□□ -1.1
PABPN1-204ENST00000554062 ARHGAP33O14559 1287 aa8.18□□□□□ -1.1
PABPN1-204ENST00000554062 KMT5BQ4FZB7 885 aa8.18□□□□□ -1.1
PABPN1-204ENST00000554062 SWT1Q5T5J6 900 aaKnown RBP8.18□□□□□ -1.1
PABPN1-204ENST00000554062 CABLES1Q8TDN4 633 aa8.18□□□□□ -1.1
PABPN1-204ENST00000554062 SMAPO00193 183 aa8.17□□□□□ -1.1
PABPN1-204ENST00000554062 FBXO31Q5XUX0 539 aaPredicted RBP8.17□□□□□ -1.1
PABPN1-204ENST00000554062 FAM163AQ96GL9 167 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms