RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 SLC52A1Q9NWF4 448 aa15.22■□□□□ 0.03
ACTN1-210ENST00000553779 TMEM94Q12767 1356 aa15.22■□□□□ 0.03
ACTN1-210ENST00000553779 E9PCH4 1651 aa15.22■□□□□ 0.03
ACTN1-210ENST00000553779 CHD2O14647 1828 aaKnown RBP15.22■□□□□ 0.03
ACTN1-210ENST00000553779 NKTRP30414 1462 aaKnown RBP15.21■□□□□ 0.03
ACTN1-210ENST00000553779 NWD1Q149M9 1564 aa15.21■□□□□ 0.03
ACTN1-210ENST00000553779 PROSER2Q86WR7 435 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-210ENST00000553779 TMEM131LA2VDJ0 1609 aa15.2■□□□□ 0.02
ACTN1-210ENST00000553779 IQGAP3Q86VI3 1631 aa15.2■□□□□ 0.02
ACTN1-210ENST00000553779 KCNA6P17658 529 aa15.19■□□□□ 0.02
ACTN1-210ENST00000553779 ITGAEP38570 1179 aa15.19■□□□□ 0.02
ACTN1-210ENST00000553779 HDGFP51858 240 aaKnown RBP15.19■□□□□ 0.02
ACTN1-210ENST00000553779 PHLPP1O60346 1717 aa15.19■□□□□ 0.02
ACTN1-210ENST00000553779 MSH6P52701 1360 aa15.19■□□□□ 0.02
ACTN1-210ENST00000553779 RIMS2Q9UQ26 1411 aa15.18■□□□□ 0.02
ACTN1-210ENST00000553779 C14orf37Q86TY3 774 aa15.17■□□□□ 0.02
ACTN1-210ENST00000553779 RBM33Q96EV2 1170 aaKnown RBP15.16■□□□□ 0.02
ACTN1-210ENST00000553779 SPHKAPQ2M3C7 1700 aa15.16■□□□□ 0.02
ACTN1-210ENST00000553779 PLEKHG1Q9ULL1 1385 aa15.15■□□□□ 0.02
ACTN1-210ENST00000553779 FAM135BQ49AJ0 1406 aa15.14■□□□□ 0.01
ACTN1-210ENST00000553779 DIP2AQ14689 1571 aa15.14■□□□□ 0.01
ACTN1-210ENST00000553779 ROCK1Q13464 1354 aa15.13■□□□□ 0.01
ACTN1-210ENST00000553779 ZFYVE9O95405 1425 aa15.13■□□□□ 0.01
ACTN1-210ENST00000553779 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.13■□□□□ 0.01
ACTN1-210ENST00000553779 NUP155O75694 1391 aa15.11■□□□□ 0.01
ACTN1-210ENST00000553779 NUTM2DQ5VT03 806 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-210ENST00000553779 KIF1BO60333 1816 aa15.1■□□□□ 0.01
ACTN1-210ENST00000553779 PPARGC1BQ86YN6 1023 aaKnown RBP15.1■□□□□ 0.01
ACTN1-210ENST00000553779 TRPM2O94759 1503 aa15.1■□□□□ 0.01
ACTN1-210ENST00000553779 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-210ENST00000553779 SETD1AO15047 1707 aaKnown RBP15.06■□□□□ 0
ACTN1-210ENST00000553779 ZNF326Q5BKZ1 582 aaKnown RBP15.06■□□□□ 0
ACTN1-210ENST00000553779 SLAIN2Q9P270 581 aa15.06■□□□□ 0
ACTN1-210ENST00000553779 ATF3P18847 181 aa15.05■□□□□ -0
ACTN1-210ENST00000553779 TBX22Q9Y458 520 aa15.04■□□□□ -0
ACTN1-210ENST00000553779 COL16A1Q07092 1604 aaPredicted RBP15.03■□□□□ -0
ACTN1-210ENST00000553779 JCADQ9P266 1359 aa15.03■□□□□ -0
ACTN1-210ENST00000553779 MEX3CQ5U5Q3 659 aaKnown RBP15.03■□□□□ -0
ACTN1-210ENST00000553779 ADAMTS13Q76LX8 1427 aa15.02■□□□□ -0
ACTN1-210ENST00000553779 PIK3R4Q99570 1358 aa15.02■□□□□ -0
ACTN1-210ENST00000553779 CADPS2Q86UW7 1296 aa15.02■□□□□ -0
ACTN1-210ENST00000553779 NCOA3Q9Y6Q9 1424 aa15.01□□□□□ -0.01
ACTN1-210ENST00000553779 SHPRHQ149N8 1683 aa15.01□□□□□ -0.01
ACTN1-210ENST00000553779 CLTCL1P53675 1640 aa15.01□□□□□ -0.01
ACTN1-210ENST00000553779 XRN1Q8IZH2 1706 aaKnown RBP15□□□□□ -0.01
ACTN1-210ENST00000553779 NRXN3Q9Y4C0 1643 aa15□□□□□ -0.01
ACTN1-210ENST00000553779 SETBP1Q9Y6X0 1596 aa14.99□□□□□ -0.01
ACTN1-210ENST00000553779 AHDC1Q5TGY3 1603 aaPredicted RBP14.99□□□□□ -0.01
ACTN1-210ENST00000553779 C19orf44Q9H6X5 657 aa14.98□□□□□ -0.01
ACTN1-210ENST00000553779 RGS17Q9UGC6 210 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-210ENST00000553779 AMOTL2Q9Y2J4 779 aa14.98□□□□□ -0.01
ACTN1-210ENST00000553779 NALCNQ8IZF0 1738 aa14.96□□□□□ -0.01
ACTN1-210ENST00000553779 TRIM52Q96A61 297 aa14.96□□□□□ -0.01
ACTN1-210ENST00000553779 POTEAQ6S8J7 498 aa14.95□□□□□ -0.02
ACTN1-210ENST00000553779 SPATA31A6Q5VVP1 1343 aa14.94□□□□□ -0.02
ACTN1-210ENST00000553779 DCCP43146 1447 aa14.94□□□□□ -0.02
ACTN1-210ENST00000553779 PTPRUQ92729 1446 aa14.94□□□□□ -0.02
ACTN1-210ENST00000553779 NEXMIFQ5QGS0 1516 aa14.94□□□□□ -0.02
ACTN1-210ENST00000553779 ASXL1Q8IXJ9 1541 aa14.93□□□□□ -0.02
ACTN1-210ENST00000553779 NHSL1Q5SYE7 1610 aa14.93□□□□□ -0.02
ACTN1-210ENST00000553779 NUTM2BA6NNL0 878 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-210ENST00000553779 NUTM2EB1AL46 878 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-210ENST00000553779 NUTM2AQ8IVF1 878 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-210ENST00000553779 PPLO60437 1756 aa14.92□□□□□ -0.02
ACTN1-210ENST00000553779 LRP6O75581 1613 aa14.92□□□□□ -0.02
ACTN1-210ENST00000553779 RRBP1Q9P2E9 1410 aaKnown RBP14.92□□□□□ -0.02
ACTN1-210ENST00000553779 NAIPQ13075 1403 aa14.91□□□□□ -0.02
ACTN1-210ENST00000553779 ZNF772Q68DY9 489 aaPredicted RBP14.9□□□□□ -0.02
ACTN1-210ENST00000553779 BRINP3Q76B58 766 aa14.9□□□□□ -0.02
ACTN1-210ENST00000553779 ADGRL3Q9HAR2 1447 aa14.9□□□□□ -0.02
ACTN1-210ENST00000553779 METP08581 1390 aa14.89□□□□□ -0.03
ACTN1-210ENST00000553779 MST1RQ04912 1400 aa14.88□□□□□ -0.03
ACTN1-210ENST00000553779 SLC4A1APQ9BWU0 796 aaKnown RBP14.87□□□□□ -0.03
ACTN1-210ENST00000553779 HFM1A2PYH4 1435 aa14.86□□□□□ -0.03
ACTN1-210ENST00000553779 VGFO15240 615 aaPredicted RBP14.85□□□□□ -0.03
ACTN1-210ENST00000553779 PTCH1Q13635 1447 aa14.83□□□□□ -0.03
ACTN1-210ENST00000553779 LRRC59Q96AG4 307 aaKnown RBP14.83□□□□□ -0.04
ACTN1-210ENST00000553779 RXRBP28702 533 aa14.82□□□□□ -0.04
ACTN1-210ENST00000553779 AFF2P51816 1311 aa14.82□□□□□ -0.04
ACTN1-210ENST00000553779 SETD5Q9C0A6 1442 aa14.82□□□□□ -0.04
ACTN1-210ENST00000553779 C8orf37Q96NL8 207 aa14.81□□□□□ -0.04
ACTN1-210ENST00000553779 CCDC144AA2RUR9 1427 aa14.81□□□□□ -0.04
ACTN1-210ENST00000553779 IFT172Q9UG01 1749 aa14.8□□□□□ -0.04
ACTN1-210ENST00000553779 RPGRIP1LQ68CZ1 1315 aa14.8□□□□□ -0.04
ACTN1-210ENST00000553779 C1orf167Q5SNV9 1468 aa14.8□□□□□ -0.04
ACTN1-210ENST00000553779 DDX17Q92841 729 aaKnown RBP14.79□□□□□ -0.04
ACTN1-210ENST00000553779 PNPLA6Q8IY17 1366 aa14.78□□□□□ -0.04
ACTN1-210ENST00000553779 ROBO2Q9HCK4 1378 aa14.78□□□□□ -0.04
ACTN1-210ENST00000553779 ADAMTS2O95450 1211 aa14.77□□□□□ -0.05
ACTN1-210ENST00000553779 KNDC1Q76NI1 1749 aa14.77□□□□□ -0.05
ACTN1-210ENST00000553779 MARF1Q9Y4F3 1742 aaKnown RBP14.77□□□□□ -0.05
ACTN1-210ENST00000553779 LAMC1P11047 1609 aa14.77□□□□□ -0.05
ACTN1-210ENST00000553779 CDC42BPGQ6DT37 1551 aa14.77□□□□□ -0.05
ACTN1-210ENST00000553779 FOXD1Q16676 465 aa14.76□□□□□ -0.05
ACTN1-210ENST00000553779 RGL3Q3MIN7 710 aa14.75□□□□□ -0.05
ACTN1-210ENST00000553779 NGLY1Q96IV0 654 aa14.75□□□□□ -0.05
ACTN1-210ENST00000553779 CDK12Q9NYV4 1490 aaPredicted RBP14.75□□□□□ -0.05
ACTN1-210ENST00000553779 STK26Q9P289 416 aa14.74□□□□□ -0.05
ACTN1-210ENST00000553779 ORAI2Q96SN7 254 aa14.73□□□□□ -0.05
ACTN1-210ENST00000553779 ESCO1Q5FWF5 840 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms