RNA–Protein interactions for RNA: ENST00000553368.1

APEX1-204, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-204ENST00000553368 NKTRP30414 1462 aaKnown RBP23.28■■□□□ 1.32
APEX1-204ENST00000553368 UNC13BO14795 1591 aa23.27■■□□□ 1.32
APEX1-204ENST00000553368 PLEKHG1Q9ULL1 1385 aa23.27■■□□□ 1.31
APEX1-204ENST00000553368 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
APEX1-204ENST00000553368 GCC2Q8IWJ2 1684 aa23.25■■□□□ 1.31
APEX1-204ENST00000553368 MYO5BQ9ULV0 1848 aa23.25■■□□□ 1.31
APEX1-204ENST00000553368 RBM33Q96EV2 1170 aaKnown RBP23.24■■□□□ 1.31
APEX1-204ENST00000553368 ROCK1Q13464 1354 aa23.24■■□□□ 1.31
APEX1-204ENST00000553368 RIMS2Q9UQ26 1411 aa23.24■■□□□ 1.31
APEX1-204ENST00000553368 HDGFP51858 240 aaKnown RBP23.23■■□□□ 1.31
APEX1-204ENST00000553368 RGS17Q9UGC6 210 aaPredicted RBP23.23■■□□□ 1.31
APEX1-204ENST00000553368 BCANQ96GW7 911 aa23.22■■□□□ 1.31
APEX1-204ENST00000553368 CHD2O14647 1828 aaKnown RBP23.22■■□□□ 1.31
APEX1-204ENST00000553368 ROBO1Q9Y6N7 1651 aa23.21■■□□□ 1.31
APEX1-204ENST00000553368 TBX22Q9Y458 520 aa23.2■■□□□ 1.3
APEX1-204ENST00000553368 E9PCH4 1651 aa23.19■■□□□ 1.3
APEX1-204ENST00000553368 MSH6P52701 1360 aa23.18■■□□□ 1.3
APEX1-204ENST00000553368 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.18■■□□□ 1.3
APEX1-204ENST00000553368 IQGAP3Q86VI3 1631 aa23.18■■□□□ 1.3
APEX1-204ENST00000553368 PPP1R15AO75807 674 aaPredicted RBP23.17■■□□□ 1.3
APEX1-204ENST00000553368 SLAIN2Q9P270 581 aa23.15■■□□□ 1.3
APEX1-204ENST00000553368 ADAMTS13Q76LX8 1427 aa23.15■■□□□ 1.3
APEX1-204ENST00000553368 NCOA3Q9Y6Q9 1424 aa23.15■■□□□ 1.3
APEX1-204ENST00000553368 CHGAP10645 457 aaKnown RBP23.13■■□□□ 1.29
APEX1-204ENST00000553368 NUP155O75694 1391 aa23.12■■□□□ 1.29
APEX1-204ENST00000553368 PIK3R4Q99570 1358 aa23.11■■□□□ 1.29
APEX1-204ENST00000553368 DIP2AQ14689 1571 aa23.1■■□□□ 1.29
APEX1-204ENST00000553368 NUTM2DQ5VT03 806 aaPredicted RBP23.08■■□□□ 1.29
APEX1-204ENST00000553368 POTEAQ6S8J7 498 aa23.07■■□□□ 1.28
APEX1-204ENST00000553368 PHLPP1O60346 1717 aa23.07■■□□□ 1.28
APEX1-204ENST00000553368 JCADQ9P266 1359 aa23.05■■□□□ 1.28
APEX1-204ENST00000553368 ITGAEP38570 1179 aa23.04■■□□□ 1.28
APEX1-204ENST00000553368 C19orf44Q9H6X5 657 aa23.04■■□□□ 1.28
APEX1-204ENST00000553368 TRPM2O94759 1503 aa23.03■■□□□ 1.28
APEX1-204ENST00000553368 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.02■■□□□ 1.28
APEX1-204ENST00000553368 PTPRUQ92729 1446 aa23.02■■□□□ 1.28
APEX1-204ENST00000553368 COL16A1Q07092 1604 aaPredicted RBP23.02■■□□□ 1.28
APEX1-204ENST00000553368 CADPS2Q86UW7 1296 aa23.02■■□□□ 1.28
APEX1-204ENST00000553368 AMOTL2Q9Y2J4 779 aa23.01■■□□□ 1.27
APEX1-204ENST00000553368 C14orf37Q86TY3 774 aa22.99■■□□□ 1.27
APEX1-204ENST00000553368 SPHKAPQ2M3C7 1700 aa22.99■■□□□ 1.27
APEX1-204ENST00000553368 NRXN3Q9Y4C0 1643 aa22.98■■□□□ 1.27
APEX1-204ENST00000553368 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
APEX1-204ENST00000553368 SETBP1Q9Y6X0 1596 aa22.97■■□□□ 1.27
APEX1-204ENST00000553368 AHDC1Q5TGY3 1603 aaPredicted RBP22.97■■□□□ 1.27
APEX1-204ENST00000553368 ATF3P18847 181 aa22.97■■□□□ 1.27
APEX1-204ENST00000553368 XRN1Q8IZH2 1706 aaKnown RBP22.94■■□□□ 1.26
APEX1-204ENST00000553368 SPATA31A6Q5VVP1 1343 aa22.94■■□□□ 1.26
APEX1-204ENST00000553368 DCCP43146 1447 aa22.93■■□□□ 1.26
APEX1-204ENST00000553368 LRP6O75581 1613 aa22.92■■□□□ 1.26
APEX1-204ENST00000553368 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
APEX1-204ENST00000553368 BRINP3Q76B58 766 aa22.91■■□□□ 1.26
APEX1-204ENST00000553368 ZNF326Q5BKZ1 582 aaKnown RBP22.9■■□□□ 1.26
APEX1-204ENST00000553368 SHPRHQ149N8 1683 aa22.9■■□□□ 1.26
APEX1-204ENST00000553368 METP08581 1390 aa22.89■■□□□ 1.26
APEX1-204ENST00000553368 NAIPQ13075 1403 aa22.89■■□□□ 1.25
APEX1-204ENST00000553368 CLTCL1P53675 1640 aa22.89■■□□□ 1.25
APEX1-204ENST00000553368 NEXMIFQ5QGS0 1516 aa22.88■■□□□ 1.25
APEX1-204ENST00000553368 MST1RQ04912 1400 aa22.86■■□□□ 1.25
APEX1-204ENST00000553368 ASXL1Q8IXJ9 1541 aa22.84■■□□□ 1.25
APEX1-204ENST00000553368 SETD5Q9C0A6 1442 aa22.82■■□□□ 1.24
APEX1-204ENST00000553368 MEX3CQ5U5Q3 659 aaKnown RBP22.82■■□□□ 1.24
APEX1-204ENST00000553368 ZNF772Q68DY9 489 aaPredicted RBP22.82■■□□□ 1.24
APEX1-204ENST00000553368 KIF1BO60333 1816 aa22.82■■□□□ 1.24
APEX1-204ENST00000553368 ADGRL3Q9HAR2 1447 aa22.82■■□□□ 1.24
APEX1-204ENST00000553368 SETD1AO15047 1707 aaKnown RBP22.81■■□□□ 1.24
APEX1-204ENST00000553368 NHSL1Q5SYE7 1610 aa22.81■■□□□ 1.24
APEX1-204ENST00000553368 HFM1A2PYH4 1435 aa22.77■■□□□ 1.24
APEX1-204ENST00000553368 NALCNQ8IZF0 1738 aa22.77■■□□□ 1.23
APEX1-204ENST00000553368 VGFO15240 615 aaPredicted RBP22.76■■□□□ 1.23
APEX1-204ENST00000553368 LRRC59Q96AG4 307 aaKnown RBP22.76■■□□□ 1.23
APEX1-204ENST00000553368 RPGRIP1LQ68CZ1 1315 aa22.75■■□□□ 1.23
APEX1-204ENST00000553368 PTCH1Q13635 1447 aa22.74■■□□□ 1.23
APEX1-204ENST00000553368 PRAG1Q86YV5 1406 aa22.74■■□□□ 1.23
APEX1-204ENST00000553368 NUTM2BA6NNL0 878 aaPredicted RBP22.74■■□□□ 1.23
APEX1-204ENST00000553368 NUTM2EB1AL46 878 aaPredicted RBP22.74■■□□□ 1.23
APEX1-204ENST00000553368 NUTM2AQ8IVF1 878 aaPredicted RBP22.74■■□□□ 1.23
APEX1-204ENST00000553368 TRIM52Q96A61 297 aa22.73■■□□□ 1.23
APEX1-204ENST00000553368 C1orf167Q5SNV9 1468 aa22.72■■□□□ 1.23
APEX1-204ENST00000553368 DDX17Q92841 729 aaKnown RBP22.71■■□□□ 1.23
APEX1-204ENST00000553368 ROBO2Q9HCK4 1378 aa22.71■■□□□ 1.23
APEX1-204ENST00000553368 RXRBP28702 533 aa22.7■■□□□ 1.22
APEX1-204ENST00000553368 SLC4A1APQ9BWU0 796 aaKnown RBP22.7■■□□□ 1.22
APEX1-204ENST00000553368 PNPLA6Q8IY17 1366 aa22.7■■□□□ 1.22
APEX1-204ENST00000553368 LAMC1P11047 1609 aa22.69■■□□□ 1.22
APEX1-204ENST00000553368 CDK12Q9NYV4 1490 aaPredicted RBP22.69■■□□□ 1.22
APEX1-204ENST00000553368 AFF2P51816 1311 aa22.69■■□□□ 1.22
APEX1-204ENST00000553368 UPF1Q92900 1129 aaKnown RBP eCLIP22.68■■□□□ 1.22
APEX1-204ENST00000553368 PPLO60437 1756 aa22.67■■□□□ 1.22
APEX1-204ENST00000553368 SOS2Q07890 1332 aaPredicted RBP22.64■■□□□ 1.22
APEX1-204ENST00000553368 ORAI2Q96SN7 254 aa22.64■■□□□ 1.21
APEX1-204ENST00000553368 C8orf37Q96NL8 207 aa22.61■■□□□ 1.21
APEX1-204ENST00000553368 FOXD1Q16676 465 aa22.59■■□□□ 1.21
APEX1-204ENST00000553368 QTRT2Q9H974 415 aaKnown RBP22.59■■□□□ 1.21
APEX1-204ENST00000553368 RBM6P78332 1123 aaKnown RBP22.58■■□□□ 1.21
APEX1-204ENST00000553368 ADGRF5Q8IZF2 1346 aa22.57■■□□□ 1.2
APEX1-204ENST00000553368 SPATA31E1Q6ZUB1 1445 aa22.57■■□□□ 1.2
APEX1-204ENST00000553368 CDC42BPGQ6DT37 1551 aa22.56■■□□□ 1.2
APEX1-204ENST00000553368 CCDC144AA2RUR9 1427 aa22.56■■□□□ 1.2
APEX1-204ENST00000553368 RGS12O14924 1447 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms