RNA–Protein interactions for RNA: ENST00000552408.1

PRIM1-207, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-207ENST00000552408 SLC10A3P09131 477 aa10.74□□□□□ -0.69
PRIM1-207ENST00000552408 PPP1R18Q6NYC8 613 aa10.74□□□□□ -0.69
PRIM1-207ENST00000552408 PXYLP1Q8TE99 480 aa10.74□□□□□ -0.69
PRIM1-207ENST00000552408 HIC1Q14526 733 aa10.73□□□□□ -0.69
PRIM1-207ENST00000552408 BLOC1S3Q6QNY0 202 aa10.73□□□□□ -0.69
PRIM1-207ENST00000552408 METTL3Q86U44 580 aaKnown RBP10.71□□□□□ -0.69
PRIM1-207ENST00000552408 PCDHB3Q9Y5E6 796 aa10.71□□□□□ -0.69
PRIM1-207ENST00000552408 GNPATO15228 680 aa10.7□□□□□ -0.7
PRIM1-207ENST00000552408 TLL1O43897 1013 aa10.7□□□□□ -0.7
PRIM1-207ENST00000552408 CFHP08603 1231 aa10.7□□□□□ -0.7
PRIM1-207ENST00000552408 SMYD5Q6GMV2 418 aa10.69□□□□□ -0.7
PRIM1-207ENST00000552408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.68□□□□□ -0.7
PRIM1-207ENST00000552408 ZPR1O75312 459 aa10.68□□□□□ -0.7
PRIM1-207ENST00000552408 SLC4A3P48751 1232 aa10.68□□□□□ -0.7
PRIM1-207ENST00000552408 NECTIN2Q92692 538 aa10.67□□□□□ -0.7
PRIM1-207ENST00000552408 PHOX2BQ99453 314 aa10.67□□□□□ -0.7
PRIM1-207ENST00000552408 PRKD2Q9BZL6 878 aa10.67□□□□□ -0.7
PRIM1-207ENST00000552408 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.67□□□□□ -0.7
PRIM1-207ENST00000552408 OATP04181 439 aa10.66□□□□□ -0.7
PRIM1-207ENST00000552408 GPIHBP1Q8IV16 184 aa10.65□□□□□ -0.7
PRIM1-207ENST00000552408 ACTN4O43707 911 aaKnown RBP10.64□□□□□ -0.71
PRIM1-207ENST00000552408 VSIG10Q8N0Z9 540 aa10.64□□□□□ -0.71
PRIM1-207ENST00000552408 PUS10Q3MIT2 529 aaKnown RBP10.63□□□□□ -0.71
PRIM1-207ENST00000552408 KMT5BQ4FZB7 885 aa10.62□□□□□ -0.71
PRIM1-207ENST00000552408 PRR14Q9BWN1 585 aa10.62□□□□□ -0.71
PRIM1-207ENST00000552408 PPEF1O14829 653 aaPredicted RBP10.6□□□□□ -0.71
PRIM1-207ENST00000552408 DDX11L8A8MPP1 907 aa10.59□□□□□ -0.71
PRIM1-207ENST00000552408 EMID1Q96A84 441 aaPredicted RBP10.59□□□□□ -0.71
PRIM1-207ENST00000552408 RNF223E7ERA6 249 aa10.58□□□□□ -0.72
PRIM1-207ENST00000552408 S1PR4O95977 384 aa10.58□□□□□ -0.72
PRIM1-207ENST00000552408 RDH13Q8NBN7 331 aa10.58□□□□□ -0.72
PRIM1-207ENST00000552408 LCE2BO14633 110 aa10.57□□□□□ -0.72
PRIM1-207ENST00000552408 Q6ZNB5 142 aa10.57□□□□□ -0.72
PRIM1-207ENST00000552408 DAXXQ9UER7 740 aaPredicted RBP10.57□□□□□ -0.72
PRIM1-207ENST00000552408 GFRA3O60609 400 aa10.56□□□□□ -0.72
PRIM1-207ENST00000552408 GGCXP38435 758 aa10.54□□□□□ -0.72
PRIM1-207ENST00000552408 SCUBE3Q8IX30 993 aa10.54□□□□□ -0.72
PRIM1-207ENST00000552408 V9GY48 417 aaPredicted RBP10.54□□□□□ -0.72
PRIM1-207ENST00000552408 NR1I2O75469 434 aa10.52□□□□□ -0.73
PRIM1-207ENST00000552408 ADH1BP00325 375 aa10.52□□□□□ -0.73
PRIM1-207ENST00000552408 FUT2Q10981 343 aa10.52□□□□□ -0.73
PRIM1-207ENST00000552408 TMUB1Q9BVT8 246 aa10.52□□□□□ -0.73
PRIM1-207ENST00000552408 PLA2G2CQ5R387 149 aa10.5□□□□□ -0.73
PRIM1-207ENST00000552408 MAP2K5Q13163 448 aa10.49□□□□□ -0.73
PRIM1-207ENST00000552408 MORN1Q5T089 497 aa10.49□□□□□ -0.73
PRIM1-207ENST00000552408 LIAT1Q6ZQX7 453 aa10.49□□□□□ -0.73
PRIM1-207ENST00000552408 SLC19A1P41440 591 aa10.48□□□□□ -0.73
PRIM1-207ENST00000552408 GCGRP47871 477 aa10.48□□□□□ -0.73
PRIM1-207ENST00000552408 RSPH4AQ5TD94 716 aa10.48□□□□□ -0.73
PRIM1-207ENST00000552408 SLC6A16Q9GZN6 736 aa10.48□□□□□ -0.73
PRIM1-207ENST00000552408 IRF6O14896 467 aa10.47□□□□□ -0.73
PRIM1-207ENST00000552408 MDM2Q00987 491 aaPredicted RBP10.47□□□□□ -0.73
PRIM1-207ENST00000552408 TRIM67Q6ZTA4 783 aa10.47□□□□□ -0.73
PRIM1-207ENST00000552408 SLC27A5Q9Y2P5 690 aa10.47□□□□□ -0.73
PRIM1-207ENST00000552408 ANKLE1Q8NAG6 615 aa10.46□□□□□ -0.73
PRIM1-207ENST00000552408 CCDC102AQ96A19 550 aa10.46□□□□□ -0.73
PRIM1-207ENST00000552408 SPSB2Q99619 263 aa10.46□□□□□ -0.73
PRIM1-207ENST00000552408 PDZRN3Q9UPQ7 1066 aa10.46□□□□□ -0.73
PRIM1-207ENST00000552408 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.45□□□□□ -0.74
PRIM1-207ENST00000552408 THAP11Q96EK4 314 aa10.45□□□□□ -0.74
PRIM1-207ENST00000552408 PRDM9Q9NQV7 894 aa10.45□□□□□ -0.74
PRIM1-207ENST00000552408 NRG2O14511 850 aaPredicted RBP10.44□□□□□ -0.74
PRIM1-207ENST00000552408 ATP6V1AP38606 617 aa10.44□□□□□ -0.74
PRIM1-207ENST00000552408 HLA-CQ95604 372 aa10.44□□□□□ -0.74
PRIM1-207ENST00000552408 TULP1O00294 542 aaPredicted RBP10.43□□□□□ -0.74
PRIM1-207ENST00000552408 SPRYD7Q5W111 196 aa10.43□□□□□ -0.74
PRIM1-207ENST00000552408 RNF19BQ6ZMZ0 732 aa10.43□□□□□ -0.74
PRIM1-207ENST00000552408 SULF1Q8IWU6 871 aa10.43□□□□□ -0.74
PRIM1-207ENST00000552408 FAM160A2Q8N612 972 aaPredicted RBP10.43□□□□□ -0.74
PRIM1-207ENST00000552408 CD46P15529 392 aa10.42□□□□□ -0.74
PRIM1-207ENST00000552408 LAPTM4AQ15012 233 aa10.42□□□□□ -0.74
PRIM1-207ENST00000552408 LMOD2Q6P5Q4 547 aa10.41□□□□□ -0.74
PRIM1-207ENST00000552408 TRAF7Q6Q0C0 670 aa10.41□□□□□ -0.74
PRIM1-207ENST00000552408 MINK1Q8N4C8 1332 aaPredicted RBP10.4□□□□□ -0.74
PRIM1-207ENST00000552408 ZNF697Q5TEC3 545 aa10.39□□□□□ -0.75
PRIM1-207ENST00000552408 FMNL1O95466 1100 aaPredicted RBP10.38□□□□□ -0.75
PRIM1-207ENST00000552408 BRICD5Q6PL45 260 aa10.38□□□□□ -0.75
PRIM1-207ENST00000552408 ZNF598Q86UK7 904 aaKnown RBP10.38□□□□□ -0.75
PRIM1-207ENST00000552408 REPIN1Q9BWE0 567 aaKnown RBP10.38□□□□□ -0.75
PRIM1-207ENST00000552408 FCF1Q9Y324 198 aaKnown RBP10.38□□□□□ -0.75
PRIM1-207ENST00000552408 TNFRSF10AO00220 468 aa10.37□□□□□ -0.75
PRIM1-207ENST00000552408 GUCA2AQ02747 115 aa10.37□□□□□ -0.75
PRIM1-207ENST00000552408 KDM4AO75164 1064 aa10.34□□□□□ -0.75
PRIM1-207ENST00000552408 GDF9O60383 454 aa10.33□□□□□ -0.76
PRIM1-207ENST00000552408 FAM217BQ9NTX9 383 aaPredicted RBP10.33□□□□□ -0.76
PRIM1-207ENST00000552408 FOXC1Q12948 553 aa10.32□□□□□ -0.76
PRIM1-207ENST00000552408 ZC3H15Q8WU90 426 aaKnown RBP10.32□□□□□ -0.76
PRIM1-207ENST00000552408 GPCPD1Q9NPB8 672 aa10.32□□□□□ -0.76
PRIM1-207ENST00000552408 PKD2L1Q9P0L9 805 aa10.31□□□□□ -0.76
PRIM1-207ENST00000552408 HOXA2O43364 376 aa10.3□□□□□ -0.76
PRIM1-207ENST00000552408 KRI1Q8N9T8 703 aaKnown RBP10.3□□□□□ -0.76
PRIM1-207ENST00000552408 SYMPKQ92797 1274 aaKnown RBP10.3□□□□□ -0.76
PRIM1-207ENST00000552408 SALL2Q9Y467 1007 aaPredicted RBP10.3□□□□□ -0.76
PRIM1-207ENST00000552408 GRIPAP1Q4V328 841 aa10.29□□□□□ -0.76
PRIM1-207ENST00000552408 MSS51Q4VC12 460 aa10.29□□□□□ -0.76
PRIM1-207ENST00000552408 BARGINQ6ZT62 677 aa10.29□□□□□ -0.76
PRIM1-207ENST00000552408 ZMYND10O75800 440 aa10.28□□□□□ -0.76
PRIM1-207ENST00000552408 CLCN1P35523 988 aa10.28□□□□□ -0.76
PRIM1-207ENST00000552408 PRR20EP86478 221 aa10.28□□□□□ -0.76
PRIM1-207ENST00000552408 PRR20CP86479 221 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms