RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 KCNA6P17658 529 aa17.86■□□□□ 0.45
PRPF40B-212ENST00000551111 SLC52A1Q9NWF4 448 aa17.86■□□□□ 0.45
PRPF40B-212ENST00000551111 TMEM94Q12767 1356 aa17.86■□□□□ 0.45
PRPF40B-212ENST00000551111 ZFYVE9O95405 1425 aa17.86■□□□□ 0.45
PRPF40B-212ENST00000551111 ITGAEP38570 1179 aa17.85■□□□□ 0.45
PRPF40B-212ENST00000551111 PROSER2Q86WR7 435 aaPredicted RBP17.84■□□□□ 0.45
PRPF40B-212ENST00000551111 IQGAP3Q86VI3 1631 aa17.83■□□□□ 0.45
PRPF40B-212ENST00000551111 NWD1Q149M9 1564 aa17.83■□□□□ 0.45
PRPF40B-212ENST00000551111 RIMS2Q9UQ26 1411 aa17.82■□□□□ 0.44
PRPF40B-212ENST00000551111 NUTM2DQ5VT03 806 aaPredicted RBP17.82■□□□□ 0.44
PRPF40B-212ENST00000551111 ROBO1Q9Y6N7 1651 aa17.82■□□□□ 0.44
PRPF40B-212ENST00000551111 BCANQ96GW7 911 aa17.81■□□□□ 0.44
PRPF40B-212ENST00000551111 ROCK1Q13464 1354 aa17.8■□□□□ 0.44
PRPF40B-212ENST00000551111 CHGAP10645 457 aaKnown RBP17.8■□□□□ 0.44
PRPF40B-212ENST00000551111 FAM135BQ49AJ0 1406 aa17.79■□□□□ 0.44
PRPF40B-212ENST00000551111 PLEKHG1Q9ULL1 1385 aa17.79■□□□□ 0.44
PRPF40B-212ENST00000551111 RGS17Q9UGC6 210 aaPredicted RBP17.78■□□□□ 0.44
PRPF40B-212ENST00000551111 NKTRP30414 1462 aaKnown RBP17.77■□□□□ 0.44
PRPF40B-212ENST00000551111 PHF23Q9BUL5 403 aaPredicted RBP17.77■□□□□ 0.44
PRPF40B-212ENST00000551111 NUP155O75694 1391 aa17.77■□□□□ 0.43
PRPF40B-212ENST00000551111 ADAMTS13Q76LX8 1427 aa17.75■□□□□ 0.43
PRPF40B-212ENST00000551111 PPP1R15AO75807 674 aaPredicted RBP17.75■□□□□ 0.43
PRPF40B-212ENST00000551111 SPHKAPQ2M3C7 1700 aa17.73■□□□□ 0.43
PRPF40B-212ENST00000551111 TBX22Q9Y458 520 aa17.72■□□□□ 0.43
PRPF40B-212ENST00000551111 PHLPP1O60346 1717 aa17.72■□□□□ 0.43
PRPF40B-212ENST00000551111 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.71■□□□□ 0.43
PRPF40B-212ENST00000551111 MSH6P52701 1360 aa17.7■□□□□ 0.42
PRPF40B-212ENST00000551111 NRXN3Q9Y4C0 1643 aa17.7■□□□□ 0.42
PRPF40B-212ENST00000551111 SLAIN2Q9P270 581 aa17.7■□□□□ 0.42
PRPF40B-212ENST00000551111 PTPRUQ92729 1446 aa17.7■□□□□ 0.42
PRPF40B-212ENST00000551111 HDGFP51858 240 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-212ENST00000551111 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.68■□□□□ 0.42
PRPF40B-212ENST00000551111 DIP2AQ14689 1571 aa17.66■□□□□ 0.42
PRPF40B-212ENST00000551111 CLTCL1P53675 1640 aa17.66■□□□□ 0.42
PRPF40B-212ENST00000551111 POTEAQ6S8J7 498 aa17.66■□□□□ 0.42
PRPF40B-212ENST00000551111 COL16A1Q07092 1604 aaPredicted RBP17.65■□□□□ 0.42
PRPF40B-212ENST00000551111 RRBP1Q9P2E9 1410 aaKnown RBP17.64■□□□□ 0.41
PRPF40B-212ENST00000551111 AMOTL2Q9Y2J4 779 aa17.63■□□□□ 0.41
PRPF40B-212ENST00000551111 XRN1Q8IZH2 1706 aaKnown RBP17.63■□□□□ 0.41
PRPF40B-212ENST00000551111 NAIPQ13075 1403 aa17.63■□□□□ 0.41
PRPF40B-212ENST00000551111 TRPM2O94759 1503 aa17.62■□□□□ 0.41
PRPF40B-212ENST00000551111 C14orf37Q86TY3 774 aa17.62■□□□□ 0.41
PRPF40B-212ENST00000551111 KIF1BO60333 1816 aa17.62■□□□□ 0.41
PRPF40B-212ENST00000551111 PIK3R4Q99570 1358 aa17.61■□□□□ 0.41
PRPF40B-212ENST00000551111 SETBP1Q9Y6X0 1596 aa17.61■□□□□ 0.41
PRPF40B-212ENST00000551111 ZNF326Q5BKZ1 582 aaKnown RBP17.6■□□□□ 0.41
PRPF40B-212ENST00000551111 METP08581 1390 aa17.6■□□□□ 0.41
PRPF40B-212ENST00000551111 NCOA3Q9Y6Q9 1424 aa17.6■□□□□ 0.41
PRPF40B-212ENST00000551111 NEXMIFQ5QGS0 1516 aa17.59■□□□□ 0.41
PRPF40B-212ENST00000551111 C19orf44Q9H6X5 657 aa17.59■□□□□ 0.41
PRPF40B-212ENST00000551111 SETD1AO15047 1707 aaKnown RBP17.58■□□□□ 0.4
PRPF40B-212ENST00000551111 LRP6O75581 1613 aa17.57■□□□□ 0.4
PRPF40B-212ENST00000551111 JCADQ9P266 1359 aa17.56■□□□□ 0.4
PRPF40B-212ENST00000551111 ATF3P18847 181 aa17.56■□□□□ 0.4
PRPF40B-212ENST00000551111 AHDC1Q5TGY3 1603 aaPredicted RBP17.56■□□□□ 0.4
PRPF40B-212ENST00000551111 CADPS2Q86UW7 1296 aa17.55■□□□□ 0.4
PRPF40B-212ENST00000551111 NALCNQ8IZF0 1738 aa17.55■□□□□ 0.4
PRPF40B-212ENST00000551111 BRINP3Q76B58 766 aa17.54■□□□□ 0.4
PRPF40B-212ENST00000551111 SHPRHQ149N8 1683 aa17.54■□□□□ 0.4
PRPF40B-212ENST00000551111 TRIM52Q96A61 297 aa17.52■□□□□ 0.4
PRPF40B-212ENST00000551111 MST1RQ04912 1400 aa17.51■□□□□ 0.39
PRPF40B-212ENST00000551111 PPLO60437 1756 aa17.51■□□□□ 0.39
PRPF40B-212ENST00000551111 NHSL1Q5SYE7 1610 aa17.5■□□□□ 0.39
PRPF40B-212ENST00000551111 HFM1A2PYH4 1435 aa17.5■□□□□ 0.39
PRPF40B-212ENST00000551111 FOXD1Q16676 465 aa17.5■□□□□ 0.39
PRPF40B-212ENST00000551111 DDX17Q92841 729 aaKnown RBP17.5■□□□□ 0.39
PRPF40B-212ENST00000551111 ASXL1Q8IXJ9 1541 aa17.49■□□□□ 0.39
PRPF40B-212ENST00000551111 DCCP43146 1447 aa17.47■□□□□ 0.39
PRPF40B-212ENST00000551111 ADGRL3Q9HAR2 1447 aa17.47■□□□□ 0.39
PRPF40B-212ENST00000551111 SLC4A1APQ9BWU0 796 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-212ENST00000551111 SPATA31A6Q5VVP1 1343 aa17.46■□□□□ 0.38
PRPF40B-212ENST00000551111 NUTM2BA6NNL0 878 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-212ENST00000551111 NUTM2EB1AL46 878 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-212ENST00000551111 NUTM2AQ8IVF1 878 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-212ENST00000551111 ROBO2Q9HCK4 1378 aa17.44■□□□□ 0.38
PRPF40B-212ENST00000551111 MEX3CQ5U5Q3 659 aaKnown RBP17.42■□□□□ 0.38
PRPF40B-212ENST00000551111 SETD5Q9C0A6 1442 aa17.41■□□□□ 0.38
PRPF40B-212ENST00000551111 VGFO15240 615 aaPredicted RBP17.41■□□□□ 0.38
PRPF40B-212ENST00000551111 C1orf167Q5SNV9 1468 aa17.4■□□□□ 0.38
PRPF40B-212ENST00000551111 IFT172Q9UG01 1749 aa17.4■□□□□ 0.38
PRPF40B-212ENST00000551111 ORAI2Q96SN7 254 aa17.39■□□□□ 0.37
PRPF40B-212ENST00000551111 PTCH1Q13635 1447 aa17.38■□□□□ 0.37
PRPF40B-212ENST00000551111 ADGRF5Q8IZF2 1346 aa17.38■□□□□ 0.37
PRPF40B-212ENST00000551111 LAMC1P11047 1609 aa17.37■□□□□ 0.37
PRPF40B-212ENST00000551111 RGL3Q3MIN7 710 aa17.37■□□□□ 0.37
PRPF40B-212ENST00000551111 RPGRIP1LQ68CZ1 1315 aa17.37■□□□□ 0.37
PRPF40B-212ENST00000551111 PNPLA6Q8IY17 1366 aa17.37■□□□□ 0.37
PRPF40B-212ENST00000551111 ZNF772Q68DY9 489 aaPredicted RBP17.36■□□□□ 0.37
PRPF40B-212ENST00000551111 LRRC59Q96AG4 307 aaKnown RBP17.36■□□□□ 0.37
PRPF40B-212ENST00000551111 AFF2P51816 1311 aa17.36■□□□□ 0.37
PRPF40B-212ENST00000551111 SPATA31E1Q6ZUB1 1445 aa17.35■□□□□ 0.37
PRPF40B-212ENST00000551111 PRAG1Q86YV5 1406 aa17.34■□□□□ 0.37
PRPF40B-212ENST00000551111 MPHOSPH9Q99550 1183 aa17.34■□□□□ 0.37
PRPF40B-212ENST00000551111 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
PRPF40B-212ENST00000551111 C8orf37Q96NL8 207 aa17.32■□□□□ 0.36
PRPF40B-212ENST00000551111 CCDC144AA2RUR9 1427 aa17.31■□□□□ 0.36
PRPF40B-212ENST00000551111 RGPD8O14715 1765 aaPredicted RBP17.31■□□□□ 0.36
PRPF40B-212ENST00000551111 SOS2Q07890 1332 aaPredicted RBP17.31■□□□□ 0.36
PRPF40B-212ENST00000551111 RXRBP28702 533 aa17.31■□□□□ 0.36
PRPF40B-212ENST00000551111 WAPLQ7Z5K2 1190 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms