RNA–Protein interactions for RNA: ENST00000550884.2

AC087888.1-201, humanhuman

BASIC

Gene AC087888.1, Length 1,254 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087888.1-201ENST00000550884 COPS2P61201 443 aa12.76□□□□□ -0.37
AC087888.1-201ENST00000550884 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
AC087888.1-201ENST00000550884 GNPATO15228 680 aa12.74□□□□□ -0.37
AC087888.1-201ENST00000550884 NECTIN2Q92692 538 aa12.74□□□□□ -0.37
AC087888.1-201ENST00000550884 SLC10A3P09131 477 aa12.73□□□□□ -0.37
AC087888.1-201ENST00000550884 METTL3Q86U44 580 aaKnown RBP12.73□□□□□ -0.37
AC087888.1-201ENST00000550884 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.72□□□□□ -0.37
AC087888.1-201ENST00000550884 PPP1R18Q6NYC8 613 aa12.72□□□□□ -0.37
AC087888.1-201ENST00000550884 OATP04181 439 aa12.71□□□□□ -0.37
AC087888.1-201ENST00000550884 SLC4A3P48751 1232 aa12.71□□□□□ -0.37
AC087888.1-201ENST00000550884 BLOC1S3Q6QNY0 202 aa12.69□□□□□ -0.38
AC087888.1-201ENST00000550884 IRX2Q9BZI1 471 aaPredicted RBP12.69□□□□□ -0.38
AC087888.1-201ENST00000550884 PCDHB3Q9Y5E6 796 aa12.69□□□□□ -0.38
AC087888.1-201ENST00000550884 ZPR1O75312 459 aa12.68□□□□□ -0.38
AC087888.1-201ENST00000550884 NLRP7Q8WX94 980 aa12.68□□□□□ -0.38
AC087888.1-201ENST00000550884 PHOX2BQ99453 314 aa12.68□□□□□ -0.38
AC087888.1-201ENST00000550884 CFHP08603 1231 aa12.67□□□□□ -0.38
AC087888.1-201ENST00000550884 GPIHBP1Q8IV16 184 aa12.67□□□□□ -0.38
AC087888.1-201ENST00000550884 ACTN4O43707 911 aaKnown RBP12.65□□□□□ -0.38
AC087888.1-201ENST00000550884 PRR14Q9BWN1 585 aa12.65□□□□□ -0.38
AC087888.1-201ENST00000550884 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.65□□□□□ -0.38
AC087888.1-201ENST00000550884 TLL1O43897 1013 aa12.63□□□□□ -0.39
AC087888.1-201ENST00000550884 KMT5BQ4FZB7 885 aa12.61□□□□□ -0.39
AC087888.1-201ENST00000550884 PRKD2Q9BZL6 878 aa12.61□□□□□ -0.39
AC087888.1-201ENST00000550884 DAXXQ9UER7 740 aaPredicted RBP12.59□□□□□ -0.39
AC087888.1-201ENST00000550884 PUS10Q3MIT2 529 aaKnown RBP12.56□□□□□ -0.4
AC087888.1-201ENST00000550884 DDX11L8A8MPP1 907 aa12.54□□□□□ -0.4
AC087888.1-201ENST00000550884 RNF223E7ERA6 249 aa12.53□□□□□ -0.4
AC087888.1-201ENST00000550884 EMID1Q96A84 441 aaPredicted RBP12.53□□□□□ -0.4
AC087888.1-201ENST00000550884 TMUB1Q9BVT8 246 aa12.53□□□□□ -0.4
AC087888.1-201ENST00000550884 V9GY48 417 aaPredicted RBP12.53□□□□□ -0.4
AC087888.1-201ENST00000550884 SCUBE3Q8IX30 993 aa12.52□□□□□ -0.41
AC087888.1-201ENST00000550884 RDH13Q8NBN7 331 aa12.52□□□□□ -0.41
AC087888.1-201ENST00000550884 PPEF1O14829 653 aaPredicted RBP12.51□□□□□ -0.41
AC087888.1-201ENST00000550884 GGCXP38435 758 aa12.51□□□□□ -0.41
AC087888.1-201ENST00000550884 MAP2K5Q13163 448 aa12.51□□□□□ -0.41
AC087888.1-201ENST00000550884 S1PR4O95977 384 aa12.5□□□□□ -0.41
AC087888.1-201ENST00000550884 IRF6O14896 467 aa12.49□□□□□ -0.41
AC087888.1-201ENST00000550884 NR1I2O75469 434 aa12.49□□□□□ -0.41
AC087888.1-201ENST00000550884 RSPH4AQ5TD94 716 aa12.49□□□□□ -0.41
AC087888.1-201ENST00000550884 GCGRP47871 477 aa12.48□□□□□ -0.41
AC087888.1-201ENST00000550884 FUT2Q10981 343 aa12.48□□□□□ -0.41
AC087888.1-201ENST00000550884 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.48□□□□□ -0.41
AC087888.1-201ENST00000550884 LCE2BO14633 110 aa12.47□□□□□ -0.41
AC087888.1-201ENST00000550884 GFRA3O60609 400 aa12.47□□□□□ -0.41
AC087888.1-201ENST00000550884 ADH1BP00325 375 aa12.47□□□□□ -0.41
AC087888.1-201ENST00000550884 MORN1Q5T089 497 aa12.46□□□□□ -0.41
AC087888.1-201ENST00000550884 Q6ZNB5 142 aa12.46□□□□□ -0.41
AC087888.1-201ENST00000550884 TULP1O00294 542 aaPredicted RBP12.45□□□□□ -0.42
AC087888.1-201ENST00000550884 SULF1Q8IWU6 871 aa12.44□□□□□ -0.42
AC087888.1-201ENST00000550884 ANKLE1Q8NAG6 615 aa12.43□□□□□ -0.42
AC087888.1-201ENST00000550884 CCDC102AQ96A19 550 aa12.43□□□□□ -0.42
AC087888.1-201ENST00000550884 THAP11Q96EK4 314 aa12.43□□□□□ -0.42
AC087888.1-201ENST00000550884 MINK1Q8N4C8 1332 aaPredicted RBP12.42□□□□□ -0.42
AC087888.1-201ENST00000550884 ATP6V1AP38606 617 aa12.42□□□□□ -0.42
AC087888.1-201ENST00000550884 PLA2G2CQ5R387 149 aa12.42□□□□□ -0.42
AC087888.1-201ENST00000550884 SPSB2Q99619 263 aa12.42□□□□□ -0.42
AC087888.1-201ENST00000550884 SLC6A16Q9GZN6 736 aa12.42□□□□□ -0.42
AC087888.1-201ENST00000550884 SLC27A5Q9Y2P5 690 aa12.42□□□□□ -0.42
AC087888.1-201ENST00000550884 SLC19A1P41440 591 aa12.41□□□□□ -0.42
AC087888.1-201ENST00000550884 MDM2Q00987 491 aaPredicted RBP12.41□□□□□ -0.42
AC087888.1-201ENST00000550884 LIAT1Q6ZQX7 453 aa12.41□□□□□ -0.42
AC087888.1-201ENST00000550884 CD46P15529 392 aa12.4□□□□□ -0.42
AC087888.1-201ENST00000550884 LAPTM4AQ15012 233 aa12.4□□□□□ -0.42
AC087888.1-201ENST00000550884 TRIM67Q6ZTA4 783 aa12.4□□□□□ -0.42
AC087888.1-201ENST00000550884 LMOD2Q6P5Q4 547 aa12.39□□□□□ -0.43
AC087888.1-201ENST00000550884 NRG2O14511 850 aaPredicted RBP12.38□□□□□ -0.43
AC087888.1-201ENST00000550884 SLC24A1O60721 1099 aa12.38□□□□□ -0.43
AC087888.1-201ENST00000550884 SPRYD7Q5W111 196 aa12.37□□□□□ -0.43
AC087888.1-201ENST00000550884 FAM160A2Q8N612 972 aaPredicted RBP12.37□□□□□ -0.43
AC087888.1-201ENST00000550884 PDZRN3Q9UPQ7 1066 aa12.37□□□□□ -0.43
AC087888.1-201ENST00000550884 BRICD5Q6PL45 260 aa12.35□□□□□ -0.43
AC087888.1-201ENST00000550884 RNF19BQ6ZMZ0 732 aa12.35□□□□□ -0.43
AC087888.1-201ENST00000550884 PRDM9Q9NQV7 894 aa12.34□□□□□ -0.43
AC087888.1-201ENST00000550884 HLA-CQ95604 372 aa12.33□□□□□ -0.44
AC087888.1-201ENST00000550884 REPIN1Q9BWE0 567 aaKnown RBP12.33□□□□□ -0.44
AC087888.1-201ENST00000550884 FMNL1O95466 1100 aaPredicted RBP12.32□□□□□ -0.44
AC087888.1-201ENST00000550884 TRAF7Q6Q0C0 670 aa12.32□□□□□ -0.44
AC087888.1-201ENST00000550884 ZNF598Q86UK7 904 aaKnown RBP12.32□□□□□ -0.44
AC087888.1-201ENST00000550884 SALL2Q9Y467 1007 aaPredicted RBP12.32□□□□□ -0.44
AC087888.1-201ENST00000550884 KDM4AO75164 1064 aa12.3□□□□□ -0.44
AC087888.1-201ENST00000550884 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
AC087888.1-201ENST00000550884 FAM217BQ9NTX9 383 aaPredicted RBP12.3□□□□□ -0.44
AC087888.1-201ENST00000550884 ZMYND10O75800 440 aa12.29□□□□□ -0.44
AC087888.1-201ENST00000550884 ZNF697Q5TEC3 545 aa12.29□□□□□ -0.44
AC087888.1-201ENST00000550884 GPCPD1Q9NPB8 672 aa12.29□□□□□ -0.44
AC087888.1-201ENST00000550884 BARGINQ6ZT62 677 aa12.28□□□□□ -0.44
AC087888.1-201ENST00000550884 FCF1Q9Y324 198 aaKnown RBP12.28□□□□□ -0.44
AC087888.1-201ENST00000550884 GDF9O60383 454 aa12.26□□□□□ -0.45
AC087888.1-201ENST00000550884 CLCN1P35523 988 aa12.26□□□□□ -0.45
AC087888.1-201ENST00000550884 GRIPAP1Q4V328 841 aa12.26□□□□□ -0.45
AC087888.1-201ENST00000550884 GUCA2AQ02747 115 aa12.25□□□□□ -0.45
AC087888.1-201ENST00000550884 HOXA2O43364 376 aa12.24□□□□□ -0.45
AC087888.1-201ENST00000550884 PRR20EP86478 221 aa12.24□□□□□ -0.45
AC087888.1-201ENST00000550884 PRR20CP86479 221 aa12.24□□□□□ -0.45
AC087888.1-201ENST00000550884 PRR20DP86480 221 aa12.24□□□□□ -0.45
AC087888.1-201ENST00000550884 PRR20BP86481 221 aa12.24□□□□□ -0.45
AC087888.1-201ENST00000550884 PRR20AP86496 221 aa12.24□□□□□ -0.45
AC087888.1-201ENST00000550884 MSS51Q4VC12 460 aa12.24□□□□□ -0.45
AC087888.1-201ENST00000550884 KRI1Q8N9T8 703 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms