RNA–Protein interactions for RNA: ENST00000550884.2

AC087888.1-201, humanhuman

BASIC

Gene AC087888.1, Length 1,254 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087888.1-201ENST00000550884 COPS2P61201 443 aa12.76□□□□□ -0.37
AC087888.1-201ENST00000550884 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
AC087888.1-201ENST00000550884 GNPATO15228 680 aa12.74□□□□□ -0.37
AC087888.1-201ENST00000550884 NECTIN2Q92692 538 aa12.74□□□□□ -0.37
AC087888.1-201ENST00000550884 SLC10A3P09131 477 aa12.73□□□□□ -0.37
AC087888.1-201ENST00000550884 METTL3Q86U44 580 aaKnown RBP12.73□□□□□ -0.37
AC087888.1-201ENST00000550884 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.72□□□□□ -0.37
AC087888.1-201ENST00000550884 PPP1R18Q6NYC8 613 aa12.72□□□□□ -0.37
AC087888.1-201ENST00000550884 OATP04181 439 aa12.71□□□□□ -0.37
AC087888.1-201ENST00000550884 SLC4A3P48751 1232 aa12.71□□□□□ -0.37
AC087888.1-201ENST00000550884 BLOC1S3Q6QNY0 202 aa12.69□□□□□ -0.38
AC087888.1-201ENST00000550884 IRX2Q9BZI1 471 aaPredicted RBP12.69□□□□□ -0.38
AC087888.1-201ENST00000550884 PCDHB3Q9Y5E6 796 aa12.69□□□□□ -0.38
AC087888.1-201ENST00000550884 ZPR1O75312 459 aa12.68□□□□□ -0.38
AC087888.1-201ENST00000550884 NLRP7Q8WX94 980 aa12.68□□□□□ -0.38
AC087888.1-201ENST00000550884 PHOX2BQ99453 314 aa12.68□□□□□ -0.38
AC087888.1-201ENST00000550884 CFHP08603 1231 aa12.67□□□□□ -0.38
AC087888.1-201ENST00000550884 GPIHBP1Q8IV16 184 aa12.67□□□□□ -0.38
AC087888.1-201ENST00000550884 ACTN4O43707 911 aaKnown RBP12.65□□□□□ -0.38
AC087888.1-201ENST00000550884 PRR14Q9BWN1 585 aa12.65□□□□□ -0.38
AC087888.1-201ENST00000550884 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.65□□□□□ -0.38
AC087888.1-201ENST00000550884 TLL1O43897 1013 aa12.63□□□□□ -0.39
AC087888.1-201ENST00000550884 KMT5BQ4FZB7 885 aa12.61□□□□□ -0.39
AC087888.1-201ENST00000550884 PRKD2Q9BZL6 878 aa12.61□□□□□ -0.39
AC087888.1-201ENST00000550884 DAXXQ9UER7 740 aaPredicted RBP12.59□□□□□ -0.39
AC087888.1-201ENST00000550884 PUS10Q3MIT2 529 aaKnown RBP12.56□□□□□ -0.4
AC087888.1-201ENST00000550884 DDX11L8A8MPP1 907 aa12.54□□□□□ -0.4
AC087888.1-201ENST00000550884 RNF223E7ERA6 249 aa12.53□□□□□ -0.4
AC087888.1-201ENST00000550884 EMID1Q96A84 441 aaPredicted RBP12.53□□□□□ -0.4
AC087888.1-201ENST00000550884 TMUB1Q9BVT8 246 aa12.53□□□□□ -0.4
AC087888.1-201ENST00000550884 V9GY48 417 aaPredicted RBP12.53□□□□□ -0.4
AC087888.1-201ENST00000550884 SCUBE3Q8IX30 993 aa12.52□□□□□ -0.41
AC087888.1-201ENST00000550884 RDH13Q8NBN7 331 aa12.52□□□□□ -0.41
AC087888.1-201ENST00000550884 PPEF1O14829 653 aaPredicted RBP12.51□□□□□ -0.41
AC087888.1-201ENST00000550884 GGCXP38435 758 aa12.51□□□□□ -0.41
AC087888.1-201ENST00000550884 MAP2K5Q13163 448 aa12.51□□□□□ -0.41
AC087888.1-201ENST00000550884 S1PR4O95977 384 aa12.5□□□□□ -0.41
AC087888.1-201ENST00000550884 IRF6O14896 467 aa12.49□□□□□ -0.41
AC087888.1-201ENST00000550884 NR1I2O75469 434 aa12.49□□□□□ -0.41
AC087888.1-201ENST00000550884 RSPH4AQ5TD94 716 aa12.49□□□□□ -0.41
AC087888.1-201ENST00000550884 GCGRP47871 477 aa12.48□□□□□ -0.41
AC087888.1-201ENST00000550884 FUT2Q10981 343 aa12.48□□□□□ -0.41
AC087888.1-201ENST00000550884 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.48□□□□□ -0.41
AC087888.1-201ENST00000550884 LCE2BO14633 110 aa12.47□□□□□ -0.41
AC087888.1-201ENST00000550884 GFRA3O60609 400 aa12.47□□□□□ -0.41
AC087888.1-201ENST00000550884 ADH1BP00325 375 aa12.47□□□□□ -0.41
AC087888.1-201ENST00000550884 MORN1Q5T089 497 aa12.46□□□□□ -0.41
AC087888.1-201ENST00000550884 Q6ZNB5 142 aa12.46□□□□□ -0.41
AC087888.1-201ENST00000550884 TULP1O00294 542 aaPredicted RBP12.45□□□□□ -0.42
AC087888.1-201ENST00000550884 SULF1Q8IWU6 871 aa12.44□□□□□ -0.42
AC087888.1-201ENST00000550884 ANKLE1Q8NAG6 615 aa12.43□□□□□ -0.42
AC087888.1-201ENST00000550884 CCDC102AQ96A19 550 aa12.43□□□□□ -0.42
AC087888.1-201ENST00000550884 THAP11Q96EK4 314 aa12.43□□□□□ -0.42
AC087888.1-201ENST00000550884 MINK1Q8N4C8 1332 aaPredicted RBP12.42□□□□□ -0.42
AC087888.1-201ENST00000550884 ATP6V1AP38606 617 aa12.42□□□□□ -0.42
AC087888.1-201ENST00000550884 PLA2G2CQ5R387 149 aa12.42□□□□□ -0.42
AC087888.1-201ENST00000550884 SPSB2Q99619 263 aa12.42□□□□□ -0.42
AC087888.1-201ENST00000550884 SLC6A16Q9GZN6 736 aa12.42□□□□□ -0.42
AC087888.1-201ENST00000550884 SLC27A5Q9Y2P5 690 aa12.42□□□□□ -0.42
AC087888.1-201ENST00000550884 SLC19A1P41440 591 aa12.41□□□□□ -0.42
AC087888.1-201ENST00000550884 MDM2Q00987 491 aaPredicted RBP12.41□□□□□ -0.42
AC087888.1-201ENST00000550884 LIAT1Q6ZQX7 453 aa12.41□□□□□ -0.42
AC087888.1-201ENST00000550884 CD46P15529 392 aa12.4□□□□□ -0.42
AC087888.1-201ENST00000550884 LAPTM4AQ15012 233 aa12.4□□□□□ -0.42
AC087888.1-201ENST00000550884 TRIM67Q6ZTA4 783 aa12.4□□□□□ -0.42
AC087888.1-201ENST00000550884 LMOD2Q6P5Q4 547 aa12.39□□□□□ -0.43
AC087888.1-201ENST00000550884 NRG2O14511 850 aaPredicted RBP12.38□□□□□ -0.43
AC087888.1-201ENST00000550884 SLC24A1O60721 1099 aa12.38□□□□□ -0.43
AC087888.1-201ENST00000550884 SPRYD7Q5W111 196 aa12.37□□□□□ -0.43
AC087888.1-201ENST00000550884 FAM160A2Q8N612 972 aaPredicted RBP12.37□□□□□ -0.43
AC087888.1-201ENST00000550884 PDZRN3Q9UPQ7 1066 aa12.37□□□□□ -0.43
AC087888.1-201ENST00000550884 BRICD5Q6PL45 260 aa12.35□□□□□ -0.43
AC087888.1-201ENST00000550884 RNF19BQ6ZMZ0 732 aa12.35□□□□□ -0.43
AC087888.1-201ENST00000550884 PRDM9Q9NQV7 894 aa12.34□□□□□ -0.43
AC087888.1-201ENST00000550884 HLA-CQ95604 372 aa12.33□□□□□ -0.44
AC087888.1-201ENST00000550884 REPIN1Q9BWE0 567 aaKnown RBP12.33□□□□□ -0.44
AC087888.1-201ENST00000550884 FMNL1O95466 1100 aaPredicted RBP12.32□□□□□ -0.44
AC087888.1-201ENST00000550884 TRAF7Q6Q0C0 670 aa12.32□□□□□ -0.44
AC087888.1-201ENST00000550884 ZNF598Q86UK7 904 aaKnown RBP12.32□□□□□ -0.44
AC087888.1-201ENST00000550884 SALL2Q9Y467 1007 aaPredicted RBP12.32□□□□□ -0.44
AC087888.1-201ENST00000550884 KDM4AO75164 1064 aa12.3□□□□□ -0.44
AC087888.1-201ENST00000550884 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
AC087888.1-201ENST00000550884 FAM217BQ9NTX9 383 aaPredicted RBP12.3□□□□□ -0.44
AC087888.1-201ENST00000550884 ZMYND10O75800 440 aa12.29□□□□□ -0.44
AC087888.1-201ENST00000550884 ZNF697Q5TEC3 545 aa12.29□□□□□ -0.44
AC087888.1-201ENST00000550884 GPCPD1Q9NPB8 672 aa12.29□□□□□ -0.44
AC087888.1-201ENST00000550884 BARGINQ6ZT62 677 aa12.28□□□□□ -0.44
AC087888.1-201ENST00000550884 FCF1Q9Y324 198 aaKnown RBP12.28□□□□□ -0.44
AC087888.1-201ENST00000550884 GDF9O60383 454 aa12.26□□□□□ -0.45
AC087888.1-201ENST00000550884 CLCN1P35523 988 aa12.26□□□□□ -0.45
AC087888.1-201ENST00000550884 GRIPAP1Q4V328 841 aa12.26□□□□□ -0.45
AC087888.1-201ENST00000550884 GUCA2AQ02747 115 aa12.25□□□□□ -0.45
AC087888.1-201ENST00000550884 HOXA2O43364 376 aa12.24□□□□□ -0.45
AC087888.1-201ENST00000550884 PRR20EP86478 221 aa12.24□□□□□ -0.45
AC087888.1-201ENST00000550884 PRR20CP86479 221 aa12.24□□□□□ -0.45
AC087888.1-201ENST00000550884 PRR20DP86480 221 aa12.24□□□□□ -0.45
AC087888.1-201ENST00000550884 PRR20BP86481 221 aa12.24□□□□□ -0.45
AC087888.1-201ENST00000550884 PRR20AP86496 221 aa12.24□□□□□ -0.45
AC087888.1-201ENST00000550884 MSS51Q4VC12 460 aa12.24□□□□□ -0.45
AC087888.1-201ENST00000550884 KRI1Q8N9T8 703 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms