RNA–Protein interactions for RNA: ENST00000550808.5

MTA1-218, Transcript of metastasis associated 1, humanhuman

TSL 5

Gene MTA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-218ENST00000550808 TMEM131LA2VDJ0 1609 aa35.32■■■■□ 3.24
MTA1-218ENST00000550808 BCANQ96GW7 911 aa35.3■■■■□ 3.24
MTA1-218ENST00000550808 CHGAP10645 457 aaKnown RBP35.28■■■■□ 3.24
MTA1-218ENST00000550808 ZFYVE9O95405 1425 aa35.25■■■■□ 3.23
MTA1-218ENST00000550808 RIMS2Q9UQ26 1411 aa35.24■■■■□ 3.23
MTA1-218ENST00000550808 PPP1R15AO75807 674 aaPredicted RBP35.23■■■■□ 3.23
MTA1-218ENST00000550808 KCNA6P17658 529 aa35.23■■■■□ 3.23
MTA1-218ENST00000550808 RRBP1Q9P2E9 1410 aaKnown RBP35.22■■■■□ 3.23
MTA1-218ENST00000550808 TMEM94Q12767 1356 aa35.18■■■■□ 3.22
MTA1-218ENST00000550808 PLEKHG1Q9ULL1 1385 aa35.18■■■■□ 3.22
MTA1-218ENST00000550808 HDGFP51858 240 aaKnown RBP35.18■■■■□ 3.22
MTA1-218ENST00000550808 PROSER2Q86WR7 435 aaPredicted RBP35.17■■■■□ 3.22
MTA1-218ENST00000550808 RBM33Q96EV2 1170 aaKnown RBP35.16■■■■□ 3.22
MTA1-218ENST00000550808 NUTM2DQ5VT03 806 aaPredicted RBP35.15■■■■□ 3.22
MTA1-218ENST00000550808 NWD1Q149M9 1564 aa35.15■■■■□ 3.22
MTA1-218ENST00000550808 MED1Q15648 1581 aaPredicted RBP35.13■■■■□ 3.21
MTA1-218ENST00000550808 SPHKAPQ2M3C7 1700 aa35.13■■■■□ 3.21
MTA1-218ENST00000550808 CHD2O14647 1828 aaKnown RBP35.13■■■■□ 3.21
MTA1-218ENST00000550808 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.11■■■■□ 3.21
MTA1-218ENST00000550808 NKTRP30414 1462 aaKnown RBP35.1■■■■□ 3.21
MTA1-218ENST00000550808 NAIPQ13075 1403 aa35.07■■■■□ 3.21
MTA1-218ENST00000550808 SOCS7O14512 581 aa35.03■■■■□ 3.2
MTA1-218ENST00000550808 TBX22Q9Y458 520 aa35.03■■■■□ 3.2
MTA1-218ENST00000550808 ADAMTS13Q76LX8 1427 aa35.01■■■■□ 3.2
MTA1-218ENST00000550808 DIP2AQ14689 1571 aa34.98■■■■□ 3.19
MTA1-218ENST00000550808 ROBO1Q9Y6N7 1651 aa34.98■■■■□ 3.19
MTA1-218ENST00000550808 FAM135BQ49AJ0 1406 aa34.98■■■■□ 3.19
MTA1-218ENST00000550808 MSH6P52701 1360 aa34.97■■■■□ 3.19
MTA1-218ENST00000550808 CLTCL1P53675 1640 aa34.95■■■■□ 3.19
MTA1-218ENST00000550808 ZNF326Q5BKZ1 582 aaKnown RBP34.95■■■■□ 3.19
MTA1-218ENST00000550808 TRIM52Q96A61 297 aa34.94■■■■□ 3.18
MTA1-218ENST00000550808 HFM1A2PYH4 1435 aa34.93■■■■□ 3.18
MTA1-218ENST00000550808 PHF23Q9BUL5 403 aaPredicted RBP34.91■■■■□ 3.18
MTA1-218ENST00000550808 TRPM2O94759 1503 aa34.91■■■■□ 3.18
MTA1-218ENST00000550808 KIF1BO60333 1816 aa34.9■■■■□ 3.18
MTA1-218ENST00000550808 NRXN3Q9Y4C0 1643 aa34.88■■■■□ 3.17
MTA1-218ENST00000550808 C14orf37Q86TY3 774 aa34.88■■■■□ 3.17
MTA1-218ENST00000550808 PIK3R4Q99570 1358 aa34.87■■■■□ 3.17
MTA1-218ENST00000550808 SLAIN2Q9P270 581 aa34.86■■■■□ 3.17
MTA1-218ENST00000550808 SETBP1Q9Y6X0 1596 aa34.83■■■■□ 3.17
MTA1-218ENST00000550808 PTPRUQ92729 1446 aa34.83■■■■□ 3.17
MTA1-218ENST00000550808 AMOTL2Q9Y2J4 779 aa34.83■■■■□ 3.17
MTA1-218ENST00000550808 NEXMIFQ5QGS0 1516 aa34.81■■■■□ 3.16
MTA1-218ENST00000550808 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.81■■■■□ 3.16
MTA1-218ENST00000550808 NCOA3Q9Y6Q9 1424 aa34.81■■■■□ 3.16
MTA1-218ENST00000550808 SLC4A1APQ9BWU0 796 aaKnown RBP34.8■■■■□ 3.16
MTA1-218ENST00000550808 PHLPP1O60346 1717 aa34.78■■■■□ 3.16
MTA1-218ENST00000550808 XRN1Q8IZH2 1706 aaKnown RBP34.76■■■■□ 3.16
MTA1-218ENST00000550808 C19orf44Q9H6X5 657 aa34.74■■■■□ 3.15
MTA1-218ENST00000550808 METP08581 1390 aa34.73■■■■□ 3.15
MTA1-218ENST00000550808 ATF3P18847 181 aa34.72■■■■□ 3.15
MTA1-218ENST00000550808 CADPS2Q86UW7 1296 aa34.7■■■■□ 3.15
MTA1-218ENST00000550808 FOXD1Q16676 465 aa34.68■■■■□ 3.14
MTA1-218ENST00000550808 COL16A1Q07092 1604 aaPredicted RBP34.63■■■■□ 3.13
MTA1-218ENST00000550808 PPLO60437 1756 aa34.62■■■■□ 3.13
MTA1-218ENST00000550808 RGS17Q9UGC6 210 aaPredicted RBP34.62■■■■□ 3.13
MTA1-218ENST00000550808 VGFO15240 615 aaPredicted RBP34.61■■■■□ 3.13
MTA1-218ENST00000550808 SETD1AO15047 1707 aaKnown RBP34.59■■■■□ 3.13
MTA1-218ENST00000550808 JCADQ9P266 1359 aa34.58■■■■□ 3.13
MTA1-218ENST00000550808 RPGRIP1LQ68CZ1 1315 aa34.56■■■■□ 3.12
MTA1-218ENST00000550808 DCCP43146 1447 aa34.56■■■■□ 3.12
MTA1-218ENST00000550808 AHDC1Q5TGY3 1603 aaPredicted RBP34.55■■■■□ 3.12
MTA1-218ENST00000550808 MPHOSPH9Q99550 1183 aa34.55■■■■□ 3.12
MTA1-218ENST00000550808 NALCNQ8IZF0 1738 aa34.55■■■■□ 3.12
MTA1-218ENST00000550808 BRINP3Q76B58 766 aa34.53■■■■□ 3.12
MTA1-218ENST00000550808 CCDC144AA2RUR9 1427 aa34.52■■■■□ 3.12
MTA1-218ENST00000550808 ADGRL3Q9HAR2 1447 aa34.51■■■■□ 3.12
MTA1-218ENST00000550808 MST1RQ04912 1400 aa34.5■■■■□ 3.11
MTA1-218ENST00000550808 ASXL1Q8IXJ9 1541 aa34.48■■■■□ 3.11
MTA1-218ENST00000550808 RGL3Q3MIN7 710 aa34.47■■■■□ 3.11
MTA1-218ENST00000550808 SHPRHQ149N8 1683 aa34.45■■■■□ 3.11
MTA1-218ENST00000550808 POTEAQ6S8J7 498 aa34.45■■■■□ 3.11
MTA1-218ENST00000550808 ROBO2Q9HCK4 1378 aa34.44■■■■□ 3.1
MTA1-218ENST00000550808 PTCH1Q13635 1447 aa34.44■■■■□ 3.1
MTA1-218ENST00000550808 SETD5Q9C0A6 1442 aa34.44■■■■□ 3.1
MTA1-218ENST00000550808 IFT172Q9UG01 1749 aa34.43■■■■□ 3.1
MTA1-218ENST00000550808 SPATA31E1Q6ZUB1 1445 aa34.42■■■■□ 3.1
MTA1-218ENST00000550808 NHSL1Q5SYE7 1610 aa34.41■■■■□ 3.1
MTA1-218ENST00000550808 ADGRF5Q8IZF2 1346 aa34.41■■■■□ 3.1
MTA1-218ENST00000550808 LRP6O75581 1613 aa34.41■■■■□ 3.1
MTA1-218ENST00000550808 SPATA31A6Q5VVP1 1343 aa34.4■■■■□ 3.1
MTA1-218ENST00000550808 MEX3CQ5U5Q3 659 aaKnown RBP34.36■■■■□ 3.09
MTA1-218ENST00000550808 DDX17Q92841 729 aaKnown RBP34.35■■■■□ 3.09
MTA1-218ENST00000550808 PRAG1Q86YV5 1406 aa34.34■■■■□ 3.09
MTA1-218ENST00000550808 ANKRD30BQ9BXX2 1392 aa34.34■■■■□ 3.09
MTA1-218ENST00000550808 C1orf167Q5SNV9 1468 aa34.33■■■■□ 3.09
MTA1-218ENST00000550808 ACIN1Q9UKV3 1341 aaKnown RBP34.32■■■■□ 3.09
MTA1-218ENST00000550808 RAB3GAP2Q9H2M9 1393 aa34.32■■■■□ 3.08
MTA1-218ENST00000550808 NUTM2BA6NNL0 878 aaPredicted RBP34.31■■■■□ 3.08
MTA1-218ENST00000550808 NUTM2EB1AL46 878 aaPredicted RBP34.31■■■■□ 3.08
MTA1-218ENST00000550808 NUTM2AQ8IVF1 878 aaPredicted RBP34.31■■■■□ 3.08
MTA1-218ENST00000550808 STK26Q9P289 416 aa34.29■■■■□ 3.08
MTA1-218ENST00000550808 LRRC59Q96AG4 307 aaKnown RBP34.26■■■■□ 3.08
MTA1-218ENST00000550808 ORAI2Q96SN7 254 aa34.25■■■■□ 3.07
MTA1-218ENST00000550808 PIK3C2GO75747 1445 aa34.24■■■■□ 3.07
MTA1-218ENST00000550808 TMEM132EQ6IEE7 984 aa34.24■■■■□ 3.07
MTA1-218ENST00000550808 LRPPRCP42704 1394 aaKnown RBP34.21■■■■□ 3.07
MTA1-218ENST00000550808 LAMC1P11047 1609 aa34.2■■■■□ 3.07
MTA1-218ENST00000550808 WAPLQ7Z5K2 1190 aa34.2■■■■□ 3.07
MTA1-218ENST00000550808 KNDC1Q76NI1 1749 aa34.2■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms