RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 E2F4Q16254 413 aa8.28□□□□□ -1.08
LINC02388-201ENST00000550678 CC2D1BQ5T0F9 858 aaKnown RBP8.28□□□□□ -1.08
LINC02388-201ENST00000550678 FNBP4Q8N3X1 1017 aaPredicted RBP8.28□□□□□ -1.08
LINC02388-201ENST00000550678 TSPAN18Q96SJ8 248 aa8.28□□□□□ -1.08
LINC02388-201ENST00000550678 RAB11FIP3O75154 756 aa8.27□□□□□ -1.09
LINC02388-201ENST00000550678 ARID4AP29374 1257 aaPredicted RBP8.27□□□□□ -1.09
LINC02388-201ENST00000550678 FOSBP53539 338 aa8.27□□□□□ -1.09
LINC02388-201ENST00000550678 TRIM52Q96A61 297 aa8.27□□□□□ -1.09
LINC02388-201ENST00000550678 PPP4R2Q9NY27 417 aa8.27□□□□□ -1.09
LINC02388-201ENST00000550678 WASHC2CQ9Y4E1 1318 aa8.27□□□□□ -1.09
LINC02388-201ENST00000550678 MAP4K4O95819 1239 aaPredicted RBP8.26□□□□□ -1.09
LINC02388-201ENST00000550678 MCCD1P59942 119 aaPredicted RBP8.26□□□□□ -1.09
LINC02388-201ENST00000550678 MCM6Q14566 821 aa8.26□□□□□ -1.09
LINC02388-201ENST00000550678 NBPF9Q3BBW0 867 aa8.26□□□□□ -1.09
LINC02388-201ENST00000550678 CENPJQ9HC77 1338 aaPredicted RBP8.26□□□□□ -1.09
LINC02388-201ENST00000550678 ARIH1Q9Y4X5 557 aaPredicted RBP8.26□□□□□ -1.09
LINC02388-201ENST00000550678 IPO9Q96P70 1041 aaKnown RBP8.25□□□□□ -1.09
LINC02388-201ENST00000550678 PNMA2Q9UL42 364 aa8.25□□□□□ -1.09
LINC02388-201ENST00000550678 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.24□□□□□ -1.09
LINC02388-201ENST00000550678 NRDCO43847 1150 aa8.24□□□□□ -1.09
LINC02388-201ENST00000550678 DNAJC14Q6Y2X3 702 aaPredicted RBP8.24□□□□□ -1.09
LINC02388-201ENST00000550678 GOLIM4O00461 696 aa8.24□□□□□ -1.09
LINC02388-201ENST00000550678 TCERG1O14776 1098 aaKnown RBP8.24□□□□□ -1.09
LINC02388-201ENST00000550678 ANP32CO43423 234 aa8.24□□□□□ -1.09
LINC02388-201ENST00000550678 RHBDL3P58872 404 aa8.24□□□□□ -1.09
LINC02388-201ENST00000550678 MORC4Q8TE76 937 aa8.24□□□□□ -1.09
LINC02388-201ENST00000550678 UBA5Q9GZZ9 404 aa8.24□□□□□ -1.09
LINC02388-201ENST00000550678 ZFYVE27Q5T4F4 411 aa8.23□□□□□ -1.09
LINC02388-201ENST00000550678 MAMSTRQ6ZN01 415 aa8.23□□□□□ -1.09
LINC02388-201ENST00000550678 POM121Q96HA1 1249 aa8.23□□□□□ -1.09
LINC02388-201ENST00000550678 DDRGK1Q96HY6 314 aa8.23□□□□□ -1.09
LINC02388-201ENST00000550678 GOLGA6CA6NDK9 693 aa8.22□□□□□ -1.09
LINC02388-201ENST00000550678 GOLGA6BA6NDN3 693 aa8.22□□□□□ -1.09
LINC02388-201ENST00000550678 DHX16O60231 1041 aaKnown RBP8.22□□□□□ -1.09
LINC02388-201ENST00000550678 KIF4AO95239 1232 aa8.22□□□□□ -1.09
LINC02388-201ENST00000550678 GOLGA6DP0CG33 693 aa8.22□□□□□ -1.09
LINC02388-201ENST00000550678 CALRP27797 417 aaKnown RBP8.22□□□□□ -1.09
LINC02388-201ENST00000550678 GOLGA6AQ9NYA3 693 aa8.22□□□□□ -1.09
LINC02388-201ENST00000550678 PAX3P23760 479 aa8.22□□□□□ -1.09
LINC02388-201ENST00000550678 ANP32AP39687 249 aaKnown RBP8.22□□□□□ -1.09
LINC02388-201ENST00000550678 HSP90AB3PQ58FF7 597 aa8.22□□□□□ -1.09
LINC02388-201ENST00000550678 ZNF280DQ6N043 979 aa8.22□□□□□ -1.09
LINC02388-201ENST00000550678 GPIHBP1Q8IV16 184 aa8.22□□□□□ -1.09
LINC02388-201ENST00000550678 EPB41L2O43491 1005 aaKnown RBP8.21□□□□□ -1.09
LINC02388-201ENST00000550678 SCP2P22307 547 aa8.21□□□□□ -1.09
LINC02388-201ENST00000550678 DDX10Q13206 875 aaKnown RBP8.21□□□□□ -1.09
LINC02388-201ENST00000550678 RGL3Q3MIN7 710 aa8.21□□□□□ -1.09
LINC02388-201ENST00000550678 CCDC181Q5TID7 509 aa8.21□□□□□ -1.09
LINC02388-201ENST00000550678 GET4Q7L5D6 327 aaPredicted RBP8.21□□□□□ -1.09
LINC02388-201ENST00000550678 VGLL3A8MV65 326 aa8.21□□□□□ -1.1
LINC02388-201ENST00000550678 PPP1R15AO75807 674 aaPredicted RBP8.21□□□□□ -1.1
LINC02388-201ENST00000550678 CLEC4GQ6UXB4 293 aa8.21□□□□□ -1.1
LINC02388-201ENST00000550678 NUB1Q9Y5A7 615 aa8.21□□□□□ -1.1
LINC02388-201ENST00000550678 CREB3O43889 395 aa8.2□□□□□ -1.1
LINC02388-201ENST00000550678 GIMAP6Q6P9H5 292 aa8.2□□□□□ -1.1
LINC02388-201ENST00000550678 DRC1Q96MC2 740 aa8.2□□□□□ -1.1
LINC02388-201ENST00000550678 SGIP1Q9BQI5 828 aa8.2□□□□□ -1.1
LINC02388-201ENST00000550678 EXOC5O00471 708 aa8.19□□□□□ -1.1
LINC02388-201ENST00000550678 HDAC1Q13547 482 aaPredicted RBP8.19□□□□□ -1.1
LINC02388-201ENST00000550678 SETDB1Q15047 1291 aa8.19□□□□□ -1.1
LINC02388-201ENST00000550678 DDX46Q7L014 1031 aaKnown RBP8.19□□□□□ -1.1
LINC02388-201ENST00000550678 CXorf38Q8TB03 319 aa8.19□□□□□ -1.1
LINC02388-201ENST00000550678 MKL1Q969V6 931 aa8.19□□□□□ -1.1
LINC02388-201ENST00000550678 KLHL42Q9P2K6 505 aa8.19□□□□□ -1.1
LINC02388-201ENST00000550678 ATL2Q8NHH9 583 aa8.19□□□□□ -1.1
LINC02388-201ENST00000550678 SP7Q8TDD2 431 aaPredicted RBP8.19□□□□□ -1.1
LINC02388-201ENST00000550678 SH3BP5O60239 455 aa8.18□□□□□ -1.1
LINC02388-201ENST00000550678 APLP1P51693 650 aa8.18□□□□□ -1.1
LINC02388-201ENST00000550678 CSPP1Q1MSJ5 1256 aa8.18□□□□□ -1.1
LINC02388-201ENST00000550678 CACTIN-AS1Q8N1I8 211 aa8.18□□□□□ -1.1
LINC02388-201ENST00000550678 KIAA1522Q9P206 1035 aaPredicted RBP8.18□□□□□ -1.1
LINC02388-201ENST00000550678 MAGEC2Q9UBF1 373 aaPredicted RBP8.18□□□□□ -1.1
LINC02388-201ENST00000550678 ERBB3P21860 1342 aa8.18□□□□□ -1.1
LINC02388-201ENST00000550678 WDR78Q5VTH9 848 aa8.17□□□□□ -1.1
LINC02388-201ENST00000550678 MSL3Q8N5Y2 521 aaKnown RBP8.17□□□□□ -1.1
LINC02388-201ENST00000550678 VTI1AQ96AJ9 217 aa8.17□□□□□ -1.1
LINC02388-201ENST00000550678 EEA1Q15075 1411 aa8.17□□□□□ -1.1
LINC02388-201ENST00000550678 ZNF500O60304 480 aaPredicted RBP8.17□□□□□ -1.1
LINC02388-201ENST00000550678 CREBRFQ8IUR6 639 aa8.17□□□□□ -1.1
LINC02388-201ENST00000550678 ZNF513Q8N8E2 541 aaPredicted RBP8.17□□□□□ -1.1
LINC02388-201ENST00000550678 GOPCQ9HD26 462 aa8.17□□□□□ -1.1
LINC02388-201ENST00000550678 KCNA1Q09470 495 aa8.16□□□□□ -1.1
LINC02388-201ENST00000550678 ZKSCAN2Q63HK3 967 aa8.16□□□□□ -1.1
LINC02388-201ENST00000550678 NBPF10Q6P3W6 841 aaKnown RBP8.16□□□□□ -1.1
LINC02388-201ENST00000550678 HMGB1P1B2RPK0 211 aaPredicted RBP8.15□□□□□ -1.1
LINC02388-201ENST00000550678 LIG1P18858 919 aa8.15□□□□□ -1.1
LINC02388-201ENST00000550678 B4GALNT3Q6L9W6 998 aa8.15□□□□□ -1.1
LINC02388-201ENST00000550678 ANKRD23Q86SG2 305 aa8.15□□□□□ -1.1
LINC02388-201ENST00000550678 SMC5Q8IY18 1101 aa8.15□□□□□ -1.1
LINC02388-201ENST00000550678 SREK1Q8WXA9 508 aaKnown RBP8.15□□□□□ -1.1
LINC02388-201ENST00000550678 MAF1Q9H063 256 aa8.15□□□□□ -1.1
LINC02388-201ENST00000550678 IGF1RP08069 1367 aa8.15□□□□□ -1.1
LINC02388-201ENST00000550678 RPGRIP1LQ68CZ1 1315 aa8.15□□□□□ -1.1
LINC02388-201ENST00000550678 MTA1Q13330 715 aa8.15□□□□□ -1.11
LINC02388-201ENST00000550678 NBPF6Q5VWK0 638 aa8.15□□□□□ -1.11
LINC02388-201ENST00000550678 NBPF5PQ86XG9 351 aaPredicted RBP8.15□□□□□ -1.11
LINC02388-201ENST00000550678 PMM1Q92871 262 aa8.15□□□□□ -1.11
LINC02388-201ENST00000550678 NBPF4Q96M43 638 aa8.15□□□□□ -1.11
LINC02388-201ENST00000550678 CDCA7Q9BWT1 371 aaPredicted RBP8.15□□□□□ -1.11
LINC02388-201ENST00000550678 FRMD4BQ9Y2L6 1034 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms