RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 RTEL1-TNFRSF6BF6WH68 1400 aa12.12□□□□□ -0.47
UBE2N-205ENST00000550657 TRAK1Q9UPV9 953 aa12.12□□□□□ -0.47
UBE2N-205ENST00000550657 BLMP54132 1417 aaPredicted RBP12.12□□□□□ -0.47
UBE2N-205ENST00000550657 PLEKHH1Q9ULM0 1364 aa12.12□□□□□ -0.47
UBE2N-205ENST00000550657 NPM1P06748 294 aaKnown RBP eCLIP12.11□□□□□ -0.47
UBE2N-205ENST00000550657 EIF3AQ14152 1382 aaKnown RBP12.11□□□□□ -0.47
UBE2N-205ENST00000550657 ARAP3Q8WWN8 1544 aa12.11□□□□□ -0.47
UBE2N-205ENST00000550657 TRPM2O94759 1503 aa12.1□□□□□ -0.47
UBE2N-205ENST00000550657 PTPRTO14522 1441 aa12.1□□□□□ -0.47
UBE2N-205ENST00000550657 APAF1O14727 1248 aa12.1□□□□□ -0.47
UBE2N-205ENST00000550657 IPO9Q96P70 1041 aaKnown RBP12.1□□□□□ -0.47
UBE2N-205ENST00000550657 ZBTB47Q9UFB7 747 aaPredicted RBP12.1□□□□□ -0.47
UBE2N-205ENST00000550657 ATP7AQ04656 1500 aa12.1□□□□□ -0.47
UBE2N-205ENST00000550657 CLTCL1P53675 1640 aa12.1□□□□□ -0.47
UBE2N-205ENST00000550657 MADDQ8WXG6 1647 aa12.1□□□□□ -0.47
UBE2N-205ENST00000550657 GOLGA2Q08379 1002 aa12.1□□□□□ -0.47
UBE2N-205ENST00000550657 TMEM132EQ6IEE7 984 aa12.1□□□□□ -0.47
UBE2N-205ENST00000550657 LAMC1P11047 1609 aa12.09□□□□□ -0.47
UBE2N-205ENST00000550657 ASXL2Q76L83 1435 aa12.09□□□□□ -0.47
UBE2N-205ENST00000550657 PDE4AP27815 886 aa12.09□□□□□ -0.47
UBE2N-205ENST00000550657 CARD14Q9BXL6 1004 aa12.09□□□□□ -0.47
UBE2N-205ENST00000550657 TCERG1O14776 1098 aaKnown RBP12.08□□□□□ -0.47
UBE2N-205ENST00000550657 DUSP27Q5VZP5 1158 aa12.08□□□□□ -0.47
UBE2N-205ENST00000550657 ABCA9Q8IUA7 1624 aa12.08□□□□□ -0.47
UBE2N-205ENST00000550657 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
UBE2N-205ENST00000550657 STAC3Q96MF2 364 aa12.08□□□□□ -0.48
UBE2N-205ENST00000550657 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
UBE2N-205ENST00000550657 SAFB2Q14151 953 aaKnown RBP eCLIP12.06□□□□□ -0.48
UBE2N-205ENST00000550657 RNF17Q9BXT8 1623 aaKnown RBP12.06□□□□□ -0.48
UBE2N-205ENST00000550657 SLC12A5Q9H2X9 1139 aa12.05□□□□□ -0.48
UBE2N-205ENST00000550657 ASXL1Q8IXJ9 1541 aa12.05□□□□□ -0.48
UBE2N-205ENST00000550657 NOS1P29475 1434 aa12.05□□□□□ -0.48
UBE2N-205ENST00000550657 ZMYM4Q5VZL5 1548 aa12.05□□□□□ -0.48
UBE2N-205ENST00000550657 INO80Q9ULG1 1556 aaPredicted RBP12.04□□□□□ -0.48
UBE2N-205ENST00000550657 RAPGEF3O95398 923 aa12.04□□□□□ -0.48
UBE2N-205ENST00000550657 CENPJQ9HC77 1338 aaPredicted RBP12.04□□□□□ -0.48
UBE2N-205ENST00000550657 SPHKAPQ2M3C7 1700 aa12.04□□□□□ -0.48
UBE2N-205ENST00000550657 RRP7AQ9Y3A4 280 aaKnown RBP12.04□□□□□ -0.48
UBE2N-205ENST00000550657 BCAR3O75815 825 aa12.03□□□□□ -0.48
UBE2N-205ENST00000550657 MORC1Q86VD1 984 aa12.03□□□□□ -0.48
UBE2N-205ENST00000550657 DMRT2Q9Y5R5 561 aa12.03□□□□□ -0.48
UBE2N-205ENST00000550657 SLFN5Q08AF3 891 aa12.03□□□□□ -0.48
UBE2N-205ENST00000550657 BACH2Q9BYV9 841 aa12.03□□□□□ -0.48
UBE2N-205ENST00000550657 DEPDC5O75140 1603 aa12.03□□□□□ -0.48
UBE2N-205ENST00000550657 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.02□□□□□ -0.49
UBE2N-205ENST00000550657 LAS1LQ9Y4W2 734 aaKnown RBP12.02□□□□□ -0.49
UBE2N-205ENST00000550657 ERVK-7P63135 1459 aa12.02□□□□□ -0.49
UBE2N-205ENST00000550657 TET3O43151 1660 aa12.02□□□□□ -0.49
UBE2N-205ENST00000550657 IQGAP1P46940 1657 aa12.02□□□□□ -0.49
UBE2N-205ENST00000550657 INSRP06213 1382 aa12.01□□□□□ -0.49
UBE2N-205ENST00000550657 ZNF521Q96K83 1311 aa12.01□□□□□ -0.49
UBE2N-205ENST00000550657 RGS3P49796 1198 aa12.01□□□□□ -0.49
UBE2N-205ENST00000550657 BCL11AQ9H165 835 aa12.01□□□□□ -0.49
UBE2N-205ENST00000550657 SYNMO15061 1565 aa12.01□□□□□ -0.49
UBE2N-205ENST00000550657 DEKP35659 375 aaKnown RBP12□□□□□ -0.49
UBE2N-205ENST00000550657 STK26Q9P289 416 aa12□□□□□ -0.49
UBE2N-205ENST00000550657 PIK3C2GO75747 1445 aa12□□□□□ -0.49
UBE2N-205ENST00000550657 CD109Q6YHK3 1445 aa12□□□□□ -0.49
UBE2N-205ENST00000550657 CANXP27824 592 aaKnown RBP12□□□□□ -0.49
UBE2N-205ENST00000550657 CEP152O94986 1710 aa12□□□□□ -0.49
UBE2N-205ENST00000550657 OSCARQ8IYS5 282 aa12□□□□□ -0.49
UBE2N-205ENST00000550657 NSD3Q9BZ95 1437 aa11.99□□□□□ -0.49
UBE2N-205ENST00000550657 MS4A1P11836 297 aa11.99□□□□□ -0.49
UBE2N-205ENST00000550657 SLC24A1O60721 1099 aa11.99□□□□□ -0.49
UBE2N-205ENST00000550657 RTL5Q5HYW3 569 aaPredicted RBP11.99□□□□□ -0.49
UBE2N-205ENST00000550657 FRAT1Q92837 279 aaPredicted RBP11.98□□□□□ -0.49
UBE2N-205ENST00000550657 ZNF518AQ6AHZ1 1483 aa11.98□□□□□ -0.49
UBE2N-205ENST00000550657 NPATQ14207 1427 aa11.98□□□□□ -0.49
UBE2N-205ENST00000550657 VWDEQ8N2E2 1590 aa11.98□□□□□ -0.49
UBE2N-205ENST00000550657 ABCA6Q8N139 1617 aa11.97□□□□□ -0.49
UBE2N-205ENST00000550657 E9PSI1 815 aa11.97□□□□□ -0.49
UBE2N-205ENST00000550657 C14orf93Q9H972 538 aaKnown RBP11.97□□□□□ -0.49
UBE2N-205ENST00000550657 MROH1Q8NDA8 1641 aa11.97□□□□□ -0.49
UBE2N-205ENST00000550657 CABP2Q9NPB3 220 aa11.97□□□□□ -0.49
UBE2N-205ENST00000550657 NPC1L1Q9UHC9 1359 aa11.97□□□□□ -0.49
UBE2N-205ENST00000550657 EFCAB6Q5THR3 1501 aa11.97□□□□□ -0.49
UBE2N-205ENST00000550657 CENPQQ7L2Z9 268 aaPredicted RBP11.97□□□□□ -0.49
UBE2N-205ENST00000550657 KIDINS220Q9ULH0 1771 aa11.97□□□□□ -0.49
UBE2N-205ENST00000550657 MAP3K4Q9Y6R4 1608 aa11.96□□□□□ -0.49
UBE2N-205ENST00000550657 MYOM2P54296 1465 aa11.96□□□□□ -0.49
UBE2N-205ENST00000550657 SLC4A3P48751 1232 aa11.96□□□□□ -0.49
UBE2N-205ENST00000550657 MTHFSP49914 203 aa11.96□□□□□ -0.49
UBE2N-205ENST00000550657 WWC1Q8IX03 1113 aa11.96□□□□□ -0.5
UBE2N-205ENST00000550657 BCL2L13Q9BXK5 485 aa11.96□□□□□ -0.5
UBE2N-205ENST00000550657 KDM2BQ8NHM5 1336 aa11.95□□□□□ -0.5
UBE2N-205ENST00000550657 KDM5AP29375 1690 aaKnown RBP11.95□□□□□ -0.5
UBE2N-205ENST00000550657 PPRC1Q5VV67 1664 aaKnown RBP11.95□□□□□ -0.5
UBE2N-205ENST00000550657 PANK1Q8TE04 598 aa11.95□□□□□ -0.5
UBE2N-205ENST00000550657 CFAP65Q6ZU64 1925 aaKnown RBP11.95□□□□□ -0.5
UBE2N-205ENST00000550657 COG6Q9Y2V7 657 aa11.95□□□□□ -0.5
UBE2N-205ENST00000550657 TRMT2AQ8IZ69 625 aaKnown RBP11.94□□□□□ -0.5
UBE2N-205ENST00000550657 TCP11L2Q8N4U5 519 aa11.94□□□□□ -0.5
UBE2N-205ENST00000550657 MYOM1P52179 1685 aa11.94□□□□□ -0.5
UBE2N-205ENST00000550657 NKTRP30414 1462 aaKnown RBP11.94□□□□□ -0.5
UBE2N-205ENST00000550657 SRPK2P78362 688 aaKnown RBP11.93□□□□□ -0.5
UBE2N-205ENST00000550657 POGZQ7Z3K3 1410 aa11.93□□□□□ -0.5
UBE2N-205ENST00000550657 U2AF1L5P0DN76 240 aaPredicted RBP11.93□□□□□ -0.5
UBE2N-205ENST00000550657 U2AF1Q01081 240 aaKnown RBP eCLIP11.93□□□□□ -0.5
UBE2N-205ENST00000550657 MROH2AA6NES4 1674 aa11.93□□□□□ -0.5
UBE2N-205ENST00000550657 CGNL1Q0VF96 1302 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms