RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 LIAT1Q6ZQX7 453 aa10.55□□□□□ -0.72
SNRPF-202ENST00000549580 ANKLE1Q8NAG6 615 aa10.55□□□□□ -0.72
SNRPF-202ENST00000549580 AAASQ9NRG9 546 aa10.55□□□□□ -0.72
SNRPF-202ENST00000549580 ST8SIA5O15466 376 aa10.54□□□□□ -0.72
SNRPF-202ENST00000549580 ZNF697Q5TEC3 545 aa10.54□□□□□ -0.72
SNRPF-202ENST00000549580 TNFRSF10AO00220 468 aa10.52□□□□□ -0.73
SNRPF-202ENST00000549580 TLL1O43897 1013 aa10.52□□□□□ -0.73
SNRPF-202ENST00000549580 BLOC1S3Q6QNY0 202 aa10.52□□□□□ -0.73
SNRPF-202ENST00000549580 PCDHB3Q9Y5E6 796 aa10.52□□□□□ -0.73
SNRPF-202ENST00000549580 PPEF1O14829 653 aaPredicted RBP10.5□□□□□ -0.73
SNRPF-202ENST00000549580 OSBPP22059 807 aa10.5□□□□□ -0.73
SNRPF-202ENST00000549580 PRR14Q9BWN1 585 aa10.5□□□□□ -0.73
SNRPF-202ENST00000549580 GRXCR2A6NFK2 248 aa10.49□□□□□ -0.73
SNRPF-202ENST00000549580 PADI6Q6TGC4 694 aa10.49□□□□□ -0.73
SNRPF-202ENST00000549580 SLC24A1O60721 1099 aa10.48□□□□□ -0.73
SNRPF-202ENST00000549580 S1PR4O95977 384 aa10.48□□□□□ -0.73
SNRPF-202ENST00000549580 EYA1Q99502 592 aa10.47□□□□□ -0.73
SNRPF-202ENST00000549580 NPDC1Q9NQX5 325 aaPredicted RBP10.47□□□□□ -0.73
SNRPF-202ENST00000549580 CRIPAKQ8N1N5 446 aa10.46□□□□□ -0.73
SNRPF-202ENST00000549580 STK17AQ9UEE5 414 aa10.46□□□□□ -0.73
SNRPF-202ENST00000549580 ARIH1Q9Y4X5 557 aaPredicted RBP10.45□□□□□ -0.74
SNRPF-202ENST00000549580 WFS1O76024 890 aa10.44□□□□□ -0.74
SNRPF-202ENST00000549580 PLA2G2CQ5R387 149 aa10.44□□□□□ -0.74
SNRPF-202ENST00000549580 SLC4A3P48751 1232 aa10.43□□□□□ -0.74
SNRPF-202ENST00000549580 DACH1Q9UI36 760 aa10.43□□□□□ -0.74
SNRPF-202ENST00000549580 WIPF1O43516 503 aa10.42□□□□□ -0.74
SNRPF-202ENST00000549580 NFX1Q12986 1120 aaKnown RBP10.42□□□□□ -0.74
SNRPF-202ENST00000549580 PKD2L1Q9P0L9 805 aa10.42□□□□□ -0.74
SNRPF-202ENST00000549580 AVPP01185 164 aa10.39□□□□□ -0.75
SNRPF-202ENST00000549580 GMPR2Q9P2T1 348 aaKnown RBP10.39□□□□□ -0.75
SNRPF-202ENST00000549580 ACTN4O43707 911 aaKnown RBP10.38□□□□□ -0.75
SNRPF-202ENST00000549580 ADH1BP00325 375 aa10.38□□□□□ -0.75
SNRPF-202ENST00000549580 LMOD2Q6P5Q4 547 aa10.38□□□□□ -0.75
SNRPF-202ENST00000549580 LCE2CQ5TA81 110 aa10.37□□□□□ -0.75
SNRPF-202ENST00000549580 BBXQ8WY36 941 aaPredicted RBP10.36□□□□□ -0.75
SNRPF-202ENST00000549580 INSM1Q01101 510 aaPredicted RBP10.35□□□□□ -0.75
SNRPF-202ENST00000549580 E2F4Q16254 413 aa10.35□□□□□ -0.75
SNRPF-202ENST00000549580 LOC100996750A0A140TA64 210 aa10.34□□□□□ -0.75
SNRPF-202ENST00000549580 KRTAP4-6Q9BYQ5 205 aa10.34□□□□□ -0.75
SNRPF-202ENST00000549580 SLC6A16Q9GZN6 736 aa10.34□□□□□ -0.75
SNRPF-202ENST00000549580 TOR4AQ9NXH8 423 aa10.34□□□□□ -0.75
SNRPF-202ENST00000549580 C11orf95C9JLR9 678 aaPredicted RBP10.33□□□□□ -0.76
SNRPF-202ENST00000549580 FOXC1Q12948 553 aa10.33□□□□□ -0.76
SNRPF-202ENST00000549580 DNAJB2P25686 324 aa10.32□□□□□ -0.76
SNRPF-202ENST00000549580 KMT5BQ4FZB7 885 aa10.32□□□□□ -0.76
SNRPF-202ENST00000549580 TMEM134Q9H6X4 195 aa10.32□□□□□ -0.76
SNRPF-202ENST00000549580 AXIN1O15169 862 aa10.31□□□□□ -0.76
SNRPF-202ENST00000549580 SMCPP49901 116 aaPredicted RBP10.31□□□□□ -0.76
SNRPF-202ENST00000549580 CFHP08603 1231 aa10.3□□□□□ -0.76
SNRPF-202ENST00000549580 CTC1Q2NKJ3 1217 aa10.3□□□□□ -0.76
SNRPF-202ENST00000549580 SPRYD3Q8NCJ5 442 aa10.29□□□□□ -0.76
SNRPF-202ENST00000549580 NR1I2O75469 434 aa10.28□□□□□ -0.76
SNRPF-202ENST00000549580 SLC10A3P09131 477 aa10.26□□□□□ -0.77
SNRPF-202ENST00000549580 RPIAP49247 311 aa10.26□□□□□ -0.77
SNRPF-202ENST00000549580 WDR70Q9NW82 654 aa10.25□□□□□ -0.77
SNRPF-202ENST00000549580 SCUBE3Q8IX30 993 aa10.24□□□□□ -0.77
SNRPF-202ENST00000549580 CYP4X1Q8N118 509 aa10.23□□□□□ -0.77
SNRPF-202ENST00000549580 ADGRG1Q9Y653 693 aa10.23□□□□□ -0.77
SNRPF-202ENST00000549580 RCCD1A6NED2 376 aa10.22□□□□□ -0.77
SNRPF-202ENST00000549580 TERTO14746 1132 aaKnown RBP10.22□□□□□ -0.77
SNRPF-202ENST00000549580 RBM46Q8TBY0 533 aaKnown RBP10.22□□□□□ -0.77
SNRPF-202ENST00000549580 CFAP44Q96MT7 982 aa10.22□□□□□ -0.77
SNRPF-202ENST00000549580 SNRPBP14678 240 aaKnown RBP10.2□□□□□ -0.78
SNRPF-202ENST00000549580 PTGDRQ13258 359 aa10.2□□□□□ -0.78
SNRPF-202ENST00000549580 PAXIP1Q6ZW49 1069 aaPredicted RBP10.2□□□□□ -0.78
SNRPF-202ENST00000549580 SPSB2Q99619 263 aa10.2□□□□□ -0.78
SNRPF-202ENST00000549580 ATP13A2Q9NQ11 1180 aa10.18□□□□□ -0.78
SNRPF-202ENST00000549580 CD2BP2O95400 341 aaKnown RBP10.17□□□□□ -0.78
SNRPF-202ENST00000549580 MLLT3P42568 568 aaPredicted RBP10.17□□□□□ -0.78
SNRPF-202ENST00000549580 PUS10Q3MIT2 529 aaKnown RBP10.17□□□□□ -0.78
SNRPF-202ENST00000549580 TRIM47Q96LD4 638 aa10.17□□□□□ -0.78
SNRPF-202ENST00000549580 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.17□□□□□ -0.78
SNRPF-202ENST00000549580 FCF1Q9Y324 198 aaKnown RBP10.17□□□□□ -0.78
SNRPF-202ENST00000549580 FAM161AQ3B820 660 aa10.15□□□□□ -0.78
SNRPF-202ENST00000549580 SMPD1P17405 629 aa10.14□□□□□ -0.79
SNRPF-202ENST00000549580 LORP23490 312 aaPredicted RBP10.13□□□□□ -0.79
SNRPF-202ENST00000549580 THAP11Q96EK4 314 aa10.13□□□□□ -0.79
SNRPF-202ENST00000549580 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.12□□□□□ -0.79
SNRPF-202ENST00000549580 TTC24A2A3L6 582 aaPredicted RBP10.12□□□□□ -0.79
SNRPF-202ENST00000549580 SENP2Q9HC62 589 aa10.11□□□□□ -0.79
SNRPF-202ENST00000549580 FAM160A2Q8N612 972 aaPredicted RBP10.1□□□□□ -0.79
SNRPF-202ENST00000549580 FAM181BA6NEQ2 426 aa10.08□□□□□ -0.8
SNRPF-202ENST00000549580 WNT7AO00755 349 aa10.08□□□□□ -0.8
SNRPF-202ENST00000549580 MORN1Q5T089 497 aa10.08□□□□□ -0.8
SNRPF-202ENST00000549580 SNIP1Q8TAD8 396 aaKnown RBP10.08□□□□□ -0.8
SNRPF-202ENST00000549580 PRDM9Q9NQV7 894 aa10.07□□□□□ -0.8
SNRPF-202ENST00000549580 PXYLP1Q8TE99 480 aa10.06□□□□□ -0.8
SNRPF-202ENST00000549580 KIFC2Q96AC6 838 aa10.05□□□□□ -0.8
SNRPF-202ENST00000549580 J3QL48 77 aa10.04□□□□□ -0.8
SNRPF-202ENST00000549580 GMPRP36959 345 aa10.03□□□□□ -0.8
SNRPF-202ENST00000549580 ZSCAN1Q8NBB4 408 aa10.03□□□□□ -0.8
SNRPF-202ENST00000549580 FMNL1O95466 1100 aaPredicted RBP10.02□□□□□ -0.81
SNRPF-202ENST00000549580 HPS1Q92902 700 aa10.02□□□□□ -0.81
SNRPF-202ENST00000549580 MRGPRX2Q96LB1 330 aa10.02□□□□□ -0.81
SNRPF-202ENST00000549580 NUTM2FA1L443 756 aa10.01□□□□□ -0.81
SNRPF-202ENST00000549580 ZBTB24O43167 697 aaPredicted RBP10.01□□□□□ -0.81
SNRPF-202ENST00000549580 KCNV2Q8TDN2 545 aa10.01□□□□□ -0.81
SNRPF-202ENST00000549580 FUT2Q10981 343 aa10□□□□□ -0.81
SNRPF-202ENST00000549580 RSPH4AQ5TD94 716 aa10□□□□□ -0.81
SNRPF-202ENST00000549580 SLC16A10Q8TF71 515 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms