RNA–Protein interactions for RNA: ENST00000547281.5

CDK4-204, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-204ENST00000547281 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.51■■□□□ 1.51
CDK4-204ENST00000547281 RIMS2Q9UQ26 1411 aa24.5■■□□□ 1.51
CDK4-204ENST00000547281 GCC2Q8IWJ2 1684 aa24.5■■□□□ 1.51
CDK4-204ENST00000547281 NUTM2DQ5VT03 806 aaPredicted RBP24.49■■□□□ 1.51
CDK4-204ENST00000547281 RBM33Q96EV2 1170 aaKnown RBP24.47■■□□□ 1.51
CDK4-204ENST00000547281 RRBP1Q9P2E9 1410 aaKnown RBP24.46■■□□□ 1.51
CDK4-204ENST00000547281 TMEM94Q12767 1356 aa24.46■■□□□ 1.51
CDK4-204ENST00000547281 IQGAP3Q86VI3 1631 aa24.46■■□□□ 1.51
CDK4-204ENST00000547281 PLEKHG1Q9ULL1 1385 aa24.45■■□□□ 1.5
CDK4-204ENST00000547281 E9PCH4 1651 aa24.45■■□□□ 1.5
CDK4-204ENST00000547281 ZFYVE9O95405 1425 aa24.44■■□□□ 1.5
CDK4-204ENST00000547281 ALKQ9UM73 1620 aa24.43■■□□□ 1.5
CDK4-204ENST00000547281 TMEM131LA2VDJ0 1609 aa24.43■■□□□ 1.5
CDK4-204ENST00000547281 TBX22Q9Y458 520 aa24.42■■□□□ 1.5
CDK4-204ENST00000547281 TRIM52Q96A61 297 aa24.41■■□□□ 1.5
CDK4-204ENST00000547281 ZNF326Q5BKZ1 582 aaKnown RBP24.39■■□□□ 1.49
CDK4-204ENST00000547281 MYO5BQ9ULV0 1848 aa24.39■■□□□ 1.49
CDK4-204ENST00000547281 SOCS7O14512 581 aa24.37■■□□□ 1.49
CDK4-204ENST00000547281 NAIPQ13075 1403 aa24.36■■□□□ 1.49
CDK4-204ENST00000547281 C14orf37Q86TY3 774 aa24.35■■□□□ 1.49
CDK4-204ENST00000547281 MSH6P52701 1360 aa24.34■■□□□ 1.49
CDK4-204ENST00000547281 XIRP1Q702N8 1843 aaKnown RBP24.33■■□□□ 1.49
CDK4-204ENST00000547281 NKTRP30414 1462 aaKnown RBP24.33■■□□□ 1.49
CDK4-204ENST00000547281 PHF23Q9BUL5 403 aaPredicted RBP24.33■■□□□ 1.49
CDK4-204ENST00000547281 FAM135BQ49AJ0 1406 aa24.32■■□□□ 1.48
CDK4-204ENST00000547281 SLAIN2Q9P270 581 aa24.3■■□□□ 1.48
CDK4-204ENST00000547281 SLC4A1APQ9BWU0 796 aaKnown RBP24.29■■□□□ 1.48
CDK4-204ENST00000547281 NWD1Q149M9 1564 aa24.29■■□□□ 1.48
CDK4-204ENST00000547281 MED1Q15648 1581 aaPredicted RBP24.29■■□□□ 1.48
CDK4-204ENST00000547281 ADAMTS13Q76LX8 1427 aa24.28■■□□□ 1.48
CDK4-204ENST00000547281 AMOTL2Q9Y2J4 779 aa24.28■■□□□ 1.48
CDK4-204ENST00000547281 HFM1A2PYH4 1435 aa24.27■■□□□ 1.48
CDK4-204ENST00000547281 PIK3R4Q99570 1358 aa24.26■■□□□ 1.47
CDK4-204ENST00000547281 CHD2O14647 1828 aaKnown RBP24.25■■□□□ 1.47
CDK4-204ENST00000547281 SPHKAPQ2M3C7 1700 aa24.24■■□□□ 1.47
CDK4-204ENST00000547281 ATF3P18847 181 aa24.23■■□□□ 1.47
CDK4-204ENST00000547281 C19orf44Q9H6X5 657 aa24.23■■□□□ 1.47
CDK4-204ENST00000547281 NCOA3Q9Y6Q9 1424 aa24.22■■□□□ 1.47
CDK4-204ENST00000547281 DIP2AQ14689 1571 aa24.21■■□□□ 1.47
CDK4-204ENST00000547281 CADPS2Q86UW7 1296 aa24.2■■□□□ 1.46
CDK4-204ENST00000547281 TRPM2O94759 1503 aa24.2■■□□□ 1.46
CDK4-204ENST00000547281 VGFO15240 615 aaPredicted RBP24.17■■□□□ 1.46
CDK4-204ENST00000547281 ROBO1Q9Y6N7 1651 aa24.17■■□□□ 1.46
CDK4-204ENST00000547281 PTPRUQ92729 1446 aa24.17■■□□□ 1.46
CDK4-204ENST00000547281 FOXD1Q16676 465 aa24.16■■□□□ 1.46
CDK4-204ENST00000547281 CLTCL1P53675 1640 aa24.16■■□□□ 1.46
CDK4-204ENST00000547281 METP08581 1390 aa24.14■■□□□ 1.45
CDK4-204ENST00000547281 RPGRIP1LQ68CZ1 1315 aa24.12■■□□□ 1.45
CDK4-204ENST00000547281 SETBP1Q9Y6X0 1596 aa24.12■■□□□ 1.45
CDK4-204ENST00000547281 MPHOSPH9Q99550 1183 aa24.11■■□□□ 1.45
CDK4-204ENST00000547281 KIF1BO60333 1816 aa24.1■■□□□ 1.45
CDK4-204ENST00000547281 NEXMIFQ5QGS0 1516 aa24.09■■□□□ 1.45
CDK4-204ENST00000547281 NRXN3Q9Y4C0 1643 aa24.07■■□□□ 1.44
CDK4-204ENST00000547281 RGL3Q3MIN7 710 aa24.06■■□□□ 1.44
CDK4-204ENST00000547281 RGS17Q9UGC6 210 aaPredicted RBP24.06■■□□□ 1.44
CDK4-204ENST00000547281 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.06■■□□□ 1.44
CDK4-204ENST00000547281 JCADQ9P266 1359 aa24.05■■□□□ 1.44
CDK4-204ENST00000547281 PHLPP1O60346 1717 aa24.04■■□□□ 1.44
CDK4-204ENST00000547281 BRINP3Q76B58 766 aa24.03■■□□□ 1.44
CDK4-204ENST00000547281 ACIN1Q9UKV3 1341 aaKnown RBP24.03■■□□□ 1.44
CDK4-204ENST00000547281 CCDC144AA2RUR9 1427 aa24.02■■□□□ 1.44
CDK4-204ENST00000547281 XRN1Q8IZH2 1706 aaKnown RBP24■■□□□ 1.43
CDK4-204ENST00000547281 DCCP43146 1447 aa24■■□□□ 1.43
CDK4-204ENST00000547281 SETD5Q9C0A6 1442 aa23.99■■□□□ 1.43
CDK4-204ENST00000547281 MEX3CQ5U5Q3 659 aaKnown RBP23.97■■□□□ 1.43
CDK4-204ENST00000547281 ADGRL3Q9HAR2 1447 aa23.95■■□□□ 1.42
CDK4-204ENST00000547281 SPATA31A6Q5VVP1 1343 aa23.95■■□□□ 1.42
CDK4-204ENST00000547281 ADGRF5Q8IZF2 1346 aa23.95■■□□□ 1.42
CDK4-204ENST00000547281 POTEAQ6S8J7 498 aa23.95■■□□□ 1.42
CDK4-204ENST00000547281 MST1RQ04912 1400 aa23.94■■□□□ 1.42
CDK4-204ENST00000547281 ROBO2Q9HCK4 1378 aa23.93■■□□□ 1.42
CDK4-204ENST00000547281 COL16A1Q07092 1604 aaPredicted RBP23.92■■□□□ 1.42
CDK4-204ENST00000547281 STK26Q9P289 416 aa23.92■■□□□ 1.42
CDK4-204ENST00000547281 ANKRD30BQ9BXX2 1392 aa23.91■■□□□ 1.42
CDK4-204ENST00000547281 NUTM2BA6NNL0 878 aaPredicted RBP23.91■■□□□ 1.42
CDK4-204ENST00000547281 NUTM2EB1AL46 878 aaPredicted RBP23.91■■□□□ 1.42
CDK4-204ENST00000547281 NUTM2AQ8IVF1 878 aaPredicted RBP23.91■■□□□ 1.42
CDK4-204ENST00000547281 AHDC1Q5TGY3 1603 aaPredicted RBP23.91■■□□□ 1.42
CDK4-204ENST00000547281 DDX17Q92841 729 aaKnown RBP23.9■■□□□ 1.42
CDK4-204ENST00000547281 LRRC59Q96AG4 307 aaKnown RBP23.9■■□□□ 1.42
CDK4-204ENST00000547281 PTCH1Q13635 1447 aa23.9■■□□□ 1.42
CDK4-204ENST00000547281 SPATA31E1Q6ZUB1 1445 aa23.89■■□□□ 1.41
CDK4-204ENST00000547281 RAB3GAP2Q9H2M9 1393 aa23.89■■□□□ 1.41
CDK4-204ENST00000547281 ASXL1Q8IXJ9 1541 aa23.89■■□□□ 1.41
CDK4-204ENST00000547281 PPLO60437 1756 aa23.88■■□□□ 1.41
CDK4-204ENST00000547281 TMEM132EQ6IEE7 984 aa23.86■■□□□ 1.41
CDK4-204ENST00000547281 ORAI2Q96SN7 254 aa23.85■■□□□ 1.41
CDK4-204ENST00000547281 C1orf167Q5SNV9 1468 aa23.85■■□□□ 1.41
CDK4-204ENST00000547281 ZNF772Q68DY9 489 aaPredicted RBP23.83■■□□□ 1.41
CDK4-204ENST00000547281 WAPLQ7Z5K2 1190 aa23.83■■□□□ 1.41
CDK4-204ENST00000547281 SETD1AO15047 1707 aaKnown RBP23.83■■□□□ 1.41
CDK4-204ENST00000547281 NALCNQ8IZF0 1738 aa23.83■■□□□ 1.41
CDK4-204ENST00000547281 LRP6O75581 1613 aa23.81■■□□□ 1.4
CDK4-204ENST00000547281 PRAG1Q86YV5 1406 aa23.8■■□□□ 1.4
CDK4-204ENST00000547281 LRPPRCP42704 1394 aaKnown RBP23.79■■□□□ 1.4
CDK4-204ENST00000547281 ESCO1Q5FWF5 840 aa23.79■■□□□ 1.4
CDK4-204ENST00000547281 C14orf93Q9H972 538 aaKnown RBP23.78■■□□□ 1.4
CDK4-204ENST00000547281 SHPRHQ149N8 1683 aa23.78■■□□□ 1.4
CDK4-204ENST00000547281 ABCC11Q96J66 1382 aa23.78■■□□□ 1.4
CDK4-204ENST00000547281 PIK3C2GO75747 1445 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms