RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 TMCO4Q5TGY1 634 aa6.52□□□□□ -1.37
UBE4A-203ENST00000545354 PAIP2Q9BPZ3 127 aaKnown RBP6.52□□□□□ -1.37
UBE4A-203ENST00000545354 SLC52A1Q9NWF4 448 aa6.52□□□□□ -1.37
UBE4A-203ENST00000545354 RIPOR2Q9Y4F9 1068 aa6.52□□□□□ -1.37
UBE4A-203ENST00000545354 TIE1P35590 1138 aa6.52□□□□□ -1.37
UBE4A-203ENST00000545354 MYBPC2Q14324 1141 aa6.52□□□□□ -1.37
UBE4A-203ENST00000545354 SOX12O15370 315 aa6.51□□□□□ -1.37
UBE4A-203ENST00000545354 LMOD3Q0VAK6 560 aa6.51□□□□□ -1.37
UBE4A-203ENST00000545354 CCDC96Q2M329 555 aa6.51□□□□□ -1.37
UBE4A-203ENST00000545354 TSPAN18Q96SJ8 248 aa6.51□□□□□ -1.37
UBE4A-203ENST00000545354 BMP2KQ9NSY1 1161 aaPredicted RBP6.51□□□□□ -1.37
UBE4A-203ENST00000545354 NOL8Q76FK4 1167 aaKnown RBP6.5□□□□□ -1.37
UBE4A-203ENST00000545354 HIRIP3Q9BW71 556 aaPredicted RBP6.5□□□□□ -1.37
UBE4A-203ENST00000545354 EFCC1Q9HA90 598 aa6.5□□□□□ -1.37
UBE4A-203ENST00000545354 MRVI1Q9Y6F6 885 aa6.5□□□□□ -1.37
UBE4A-203ENST00000545354 ZCCHC6Q5VYS8 1495 aaKnown RBP6.5□□□□□ -1.37
UBE4A-203ENST00000545354 GORABQ5T7V8 394 aa6.5□□□□□ -1.37
UBE4A-203ENST00000545354 MSL3Q8N5Y2 521 aaKnown RBP6.5□□□□□ -1.37
UBE4A-203ENST00000545354 ZRANB2O95218 330 aaKnown RBP eCLIP6.49□□□□□ -1.37
UBE4A-203ENST00000545354 ATN1P54259 1190 aaPredicted RBP6.49□□□□□ -1.37
UBE4A-203ENST00000545354 ANKRD13AQ8IZ07 590 aa6.49□□□□□ -1.37
UBE4A-203ENST00000545354 BANK1Q8NDB2 785 aa6.49□□□□□ -1.37
UBE4A-203ENST00000545354 FAM210AQ96ND0 272 aa6.49□□□□□ -1.37
UBE4A-203ENST00000545354 PCDHB8Q9UN66 801 aa6.49□□□□□ -1.37
UBE4A-203ENST00000545354 TTLL13PA6NNM8 815 aa6.48□□□□□ -1.37
UBE4A-203ENST00000545354 NEFHP12036 1026 aa6.48□□□□□ -1.37
UBE4A-203ENST00000545354 CTR9Q6PD62 1173 aa6.48□□□□□ -1.37
UBE4A-203ENST00000545354 SDR16C5Q8N3Y7 309 aa6.48□□□□□ -1.37
UBE4A-203ENST00000545354 SEMA3FQ13275 785 aa6.47□□□□□ -1.37
UBE4A-203ENST00000545354 ZNF467Q7Z7K2 595 aaPredicted RBP6.47□□□□□ -1.37
UBE4A-203ENST00000545354 VGLL3A8MV65 326 aa6.47□□□□□ -1.37
UBE4A-203ENST00000545354 MTA1Q13330 715 aa6.47□□□□□ -1.37
UBE4A-203ENST00000545354 WDR78Q5VTH9 848 aa6.47□□□□□ -1.37
UBE4A-203ENST00000545354 FOXD4L5Q5VV16 416 aaPredicted RBP6.47□□□□□ -1.37
UBE4A-203ENST00000545354 MNS1Q8NEH6 495 aa6.47□□□□□ -1.37
UBE4A-203ENST00000545354 FOXD4L4Q8WXT5 416 aaPredicted RBP6.47□□□□□ -1.37
UBE4A-203ENST00000545354 ZNF500O60304 480 aaPredicted RBP6.46□□□□□ -1.37
UBE4A-203ENST00000545354 LIG1P18858 919 aa6.46□□□□□ -1.37
UBE4A-203ENST00000545354 SNRNP27Q8WVK2 155 aaKnown RBP6.46□□□□□ -1.37
UBE4A-203ENST00000545354 ZNF428Q96B54 188 aa6.46□□□□□ -1.37
UBE4A-203ENST00000545354 CEP83Q9Y592 693 aa6.46□□□□□ -1.37
UBE4A-203ENST00000545354 KIF1CO43896 1103 aaKnown RBP6.46□□□□□ -1.38
UBE4A-203ENST00000545354 MFAP1P55081 439 aaKnown RBP6.46□□□□□ -1.38
UBE4A-203ENST00000545354 ANKRD23Q86SG2 305 aa6.46□□□□□ -1.38
UBE4A-203ENST00000545354 SGSM3Q96HU1 749 aa6.46□□□□□ -1.38
UBE4A-203ENST00000545354 NBPF3Q9H094 633 aa6.46□□□□□ -1.38
UBE4A-203ENST00000545354 CADPSQ9ULU8 1353 aa6.45□□□□□ -1.38
UBE4A-203ENST00000545354 C7P10643 843 aa6.45□□□□□ -1.38
UBE4A-203ENST00000545354 LHX8Q68G74 356 aa6.45□□□□□ -1.38
UBE4A-203ENST00000545354 SLC39A7Q92504 469 aa6.45□□□□□ -1.38
UBE4A-203ENST00000545354 TMEM106CQ9BVX2 250 aa6.45□□□□□ -1.38
UBE4A-203ENST00000545354 CCDC66A2RUB6 948 aa6.44□□□□□ -1.38
UBE4A-203ENST00000545354 ZRSR2Q15696 482 aaKnown RBP6.44□□□□□ -1.38
UBE4A-203ENST00000545354 NESP48681 1621 aa6.44□□□□□ -1.38
UBE4A-203ENST00000545354 CXorf38Q8TB03 319 aa6.44□□□□□ -1.38
UBE4A-203ENST00000545354 MYCBPQ99417 103 aaPredicted RBP6.44□□□□□ -1.38
UBE4A-203ENST00000545354 BRPF1P55201 1214 aaPredicted RBP6.43□□□□□ -1.38
UBE4A-203ENST00000545354 ARMCX6Q7L4S7 300 aa6.43□□□□□ -1.38
UBE4A-203ENST00000545354 ITFG2Q969R8 447 aa6.43□□□□□ -1.38
UBE4A-203ENST00000545354 METRNQ9UJH8 293 aa6.43□□□□□ -1.38
UBE4A-203ENST00000545354 ZHX1Q9UKY1 873 aaPredicted RBP6.43□□□□□ -1.38
UBE4A-203ENST00000545354 TRIM35Q9UPQ4 493 aa6.43□□□□□ -1.38
UBE4A-203ENST00000545354 RBM26Q5T8P6 1007 aaKnown RBP6.43□□□□□ -1.38
UBE4A-203ENST00000545354 MTA3Q9BTC8 594 aa6.43□□□□□ -1.38
UBE4A-203ENST00000545354 UBA5Q9GZZ9 404 aa6.43□□□□□ -1.38
UBE4A-203ENST00000545354 ANAPC4Q9UJX5 808 aa6.43□□□□□ -1.38
UBE4A-203ENST00000545354 KNSTRNQ9Y448 316 aa6.43□□□□□ -1.38
UBE4A-203ENST00000545354 KIF3CO14782 793 aa6.42□□□□□ -1.38
UBE4A-203ENST00000545354 TPD52L2O43399 206 aaKnown RBP6.42□□□□□ -1.38
UBE4A-203ENST00000545354 CCDC172P0C7W6 258 aa6.41□□□□□ -1.38
UBE4A-203ENST00000545354 FOXD4L6Q3SYB3 417 aaPredicted RBP6.41□□□□□ -1.38
UBE4A-203ENST00000545354 FOXD4L3Q6VB84 417 aaPredicted RBP6.41□□□□□ -1.38
UBE4A-203ENST00000545354 CEP126Q9P2H0 1117 aa6.41□□□□□ -1.38
UBE4A-203ENST00000545354 CCER2I3L3R5 266 aa6.41□□□□□ -1.38
UBE4A-203ENST00000545354 IRF6O14896 467 aa6.41□□□□□ -1.38
UBE4A-203ENST00000545354 AEBP1Q8IUX7 1158 aa6.41□□□□□ -1.38
UBE4A-203ENST00000545354 SUDS3Q9H7L9 328 aaPredicted RBP6.41□□□□□ -1.38
UBE4A-203ENST00000545354 C1orf115Q9H7X2 142 aa6.41□□□□□ -1.38
UBE4A-203ENST00000545354 ESPNB1AK53 854 aa6.4□□□□□ -1.38
UBE4A-203ENST00000545354 POTEB2H3BUK9 544 aa6.4□□□□□ -1.38
UBE4A-203ENST00000545354 PDAP1Q13442 181 aaKnown RBP6.4□□□□□ -1.38
UBE4A-203ENST00000545354 PKD2Q13563 968 aa6.4□□□□□ -1.38
UBE4A-203ENST00000545354 IER5LQ5T953 404 aa6.4□□□□□ -1.38
UBE4A-203ENST00000545354 KRBA2Q6ZNG9 492 aa6.4□□□□□ -1.38
UBE4A-203ENST00000545354 NME8Q8N427 588 aa6.4□□□□□ -1.38
UBE4A-203ENST00000545354 TRAIPQ9BWF2 469 aa6.4□□□□□ -1.38
UBE4A-203ENST00000545354 BRMS1Q9HCU9 246 aa6.4□□□□□ -1.38
UBE4A-203ENST00000545354 FRMD4BQ9Y2L6 1034 aa6.4□□□□□ -1.38
UBE4A-203ENST00000545354 THOC2Q8NI27 1593 aaKnown RBP6.4□□□□□ -1.38
UBE4A-203ENST00000545354 POTEFA5A3E0 1075 aa6.4□□□□□ -1.39
UBE4A-203ENST00000545354 ZNF853P0CG23 659 aa6.4□□□□□ -1.39
UBE4A-203ENST00000545354 POLD1P28340 1107 aa6.4□□□□□ -1.39
UBE4A-203ENST00000545354 LONRF3Q496Y0 759 aa6.4□□□□□ -1.39
UBE4A-203ENST00000545354 RNF25Q96BH1 459 aaPredicted RBP6.4□□□□□ -1.39
UBE4A-203ENST00000545354 CCDC94Q9BW85 323 aaPredicted RBP6.4□□□□□ -1.39
UBE4A-203ENST00000545354 NCAPD3P42695 1498 aa6.39□□□□□ -1.39
UBE4A-203ENST00000545354 ZSCAN20P17040 1043 aaPredicted RBP6.39□□□□□ -1.39
UBE4A-203ENST00000545354 CSPP1Q1MSJ5 1256 aa6.39□□□□□ -1.39
UBE4A-203ENST00000545354 ARHGEF1Q92888 912 aaKnown RBP6.39□□□□□ -1.39
UBE4A-203ENST00000545354 RRAGDQ9NQL2 400 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms