RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 NBPF3Q9H094 633 aa12.17□□□□□ -0.46
COPA-206ENST00000545266 POTEGQ6S5H5 508 aa12.15□□□□□ -0.46
COPA-206ENST00000545266 SEPT9Q9UHD8 586 aaPredicted RBP12.15□□□□□ -0.46
COPA-206ENST00000545266 IL27Q8NEV9 243 aa12.14□□□□□ -0.47
COPA-206ENST00000545266 POTEMA6NI47 508 aa12.11□□□□□ -0.47
COPA-206ENST00000545266 CD46P15529 392 aa12.11□□□□□ -0.47
COPA-206ENST00000545266 SULF1Q8IWU6 871 aa12.11□□□□□ -0.47
COPA-206ENST00000545266 GOPCQ9HD26 462 aa12.11□□□□□ -0.47
COPA-206ENST00000545266 ANKRD13DQ6ZTN6 518 aa12.1□□□□□ -0.47
COPA-206ENST00000545266 MRPL50Q8N5N7 158 aaKnown RBP12.1□□□□□ -0.47
COPA-206ENST00000545266 SWT1Q5T5J6 900 aaKnown RBP12.09□□□□□ -0.47
COPA-206ENST00000545266 ZFRQ96KR1 1074 aaKnown RBP12.09□□□□□ -0.47
COPA-206ENST00000545266 BEGAINQ9BUH8 593 aa12.09□□□□□ -0.47
COPA-206ENST00000545266 CDAN1Q8IWY9 1227 aa12.07□□□□□ -0.48
COPA-206ENST00000545266 SAMD7Q7Z3H4 446 aa12.06□□□□□ -0.48
COPA-206ENST00000545266 SLC10A3P09131 477 aa12.05□□□□□ -0.48
COPA-206ENST00000545266 HDGFP51858 240 aaKnown RBP12.05□□□□□ -0.48
COPA-206ENST00000545266 DDX11L8A8MPP1 907 aa12.04□□□□□ -0.48
COPA-206ENST00000545266 SLF2Q8IX21 1173 aa12.04□□□□□ -0.48
COPA-206ENST00000545266 SH3D19Q5HYK7 790 aa12.03□□□□□ -0.48
COPA-206ENST00000545266 RSPH4AQ5TD94 716 aa12.02□□□□□ -0.49
COPA-206ENST00000545266 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
COPA-206ENST00000545266 GCGRP47871 477 aa12.01□□□□□ -0.49
COPA-206ENST00000545266 DIXDC1Q155Q3 683 aa12.01□□□□□ -0.49
COPA-206ENST00000545266 SOWAHBA6NEL2 793 aa11.99□□□□□ -0.49
COPA-206ENST00000545266 SLC4A3P48751 1232 aa11.99□□□□□ -0.49
COPA-206ENST00000545266 SKIV2LQ15477 1246 aaKnown RBP11.99□□□□□ -0.49
COPA-206ENST00000545266 SPIRE2Q8WWL2 714 aa11.99□□□□□ -0.49
COPA-206ENST00000545266 LRCH3Q96II8 777 aa11.99□□□□□ -0.49
COPA-206ENST00000545266 TBC1D2Q9BYX2 928 aa11.99□□□□□ -0.49
COPA-206ENST00000545266 MYSM1Q5VVJ2 828 aa11.98□□□□□ -0.49
COPA-206ENST00000545266 ANKK1Q8NFD2 765 aa11.98□□□□□ -0.49
COPA-206ENST00000545266 STAC3Q96MF2 364 aa11.98□□□□□ -0.49
COPA-206ENST00000545266 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.98□□□□□ -0.49
COPA-206ENST00000545266 PCDH10Q9P2E7 1040 aa11.98□□□□□ -0.49
COPA-206ENST00000545266 GJA5P36382 358 aa11.97□□□□□ -0.49
COPA-206ENST00000545266 RDH13Q8NBN7 331 aa11.97□□□□□ -0.49
COPA-206ENST00000545266 NECTIN2Q92692 538 aa11.96□□□□□ -0.49
COPA-206ENST00000545266 KDM4AO75164 1064 aa11.95□□□□□ -0.5
COPA-206ENST00000545266 USP46P62068 366 aa11.95□□□□□ -0.5
COPA-206ENST00000545266 TUSC1Q2TAM9 212 aa11.95□□□□□ -0.5
COPA-206ENST00000545266 GOLGA8CPA6NN73 597 aa11.94□□□□□ -0.5
COPA-206ENST00000545266 GTF3C3Q9Y5Q9 886 aa11.94□□□□□ -0.5
COPA-206ENST00000545266 SPTLC1O15269 473 aa11.93□□□□□ -0.5
COPA-206ENST00000545266 NUTM1Q86Y26 1132 aa11.93□□□□□ -0.5
COPA-206ENST00000545266 WNT2BQ93097 391 aa11.93□□□□□ -0.5
COPA-206ENST00000545266 CFHP08603 1231 aa11.91□□□□□ -0.5
COPA-206ENST00000545266 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.91□□□□□ -0.5
COPA-206ENST00000545266 TSR3Q9UJK0 312 aaKnown RBP11.91□□□□□ -0.5
COPA-206ENST00000545266 BCAMP50895 628 aa11.9□□□□□ -0.5
COPA-206ENST00000545266 RSBN1LQ6PCB5 846 aaPredicted RBP11.9□□□□□ -0.5
COPA-206ENST00000545266 PCMTD1Q96MG8 357 aaPredicted RBP11.9□□□□□ -0.5
COPA-206ENST00000545266 HOXA2O43364 376 aa11.89□□□□□ -0.51
COPA-206ENST00000545266 ACTN4O43707 911 aaKnown RBP11.89□□□□□ -0.51
COPA-206ENST00000545266 THSD4Q6ZMP0 1018 aa11.89□□□□□ -0.51
COPA-206ENST00000545266 RIC3Q7Z5B4 369 aa11.89□□□□□ -0.51
COPA-206ENST00000545266 MOXD2PA6NHM9 499 aa11.88□□□□□ -0.51
COPA-206ENST00000545266 CLK2P49760 499 aaKnown RBP11.88□□□□□ -0.51
COPA-206ENST00000545266 HPS5Q9UPZ3 1129 aa11.88□□□□□ -0.51
COPA-206ENST00000545266 PPP4CP60510 307 aa11.87□□□□□ -0.51
COPA-206ENST00000545266 KMT5BQ4FZB7 885 aa11.87□□□□□ -0.51
COPA-206ENST00000545266 PROCA1Q8NCQ7 364 aaPredicted RBP11.87□□□□□ -0.51
COPA-206ENST00000545266 PRR14Q9BWN1 585 aa11.87□□□□□ -0.51
COPA-206ENST00000545266 POLR3EQ9NVU0 708 aa11.87□□□□□ -0.51
COPA-206ENST00000545266 LIMD1Q9UGP4 676 aa11.87□□□□□ -0.51
COPA-206ENST00000545266 FUT2Q10981 343 aa11.86□□□□□ -0.51
COPA-206ENST00000545266 RNF40O75150 1001 aa11.85□□□□□ -0.51
COPA-206ENST00000545266 ATP6V1AP38606 617 aa11.85□□□□□ -0.51
COPA-206ENST00000545266 NDUFV2P19404 249 aa11.84□□□□□ -0.51
COPA-206ENST00000545266 PPP2R2DQ66LE6 453 aa11.84□□□□□ -0.51
COPA-206ENST00000545266 APLP1P51693 650 aa11.83□□□□□ -0.52
COPA-206ENST00000545266 GRIPAP1Q4V328 841 aa11.83□□□□□ -0.52
COPA-206ENST00000545266 NYAP1Q6ZVC0 841 aa11.83□□□□□ -0.52
COPA-206ENST00000545266 KCTD12Q96CX2 325 aaKnown RBP11.83□□□□□ -0.52
COPA-206ENST00000545266 WBP1LQ9NX94 342 aa11.83□□□□□ -0.52
COPA-206ENST00000545266 MORN1Q5T089 497 aa11.82□□□□□ -0.52
COPA-206ENST00000545266 PRPF38BQ5VTL8 546 aaKnown RBP11.82□□□□□ -0.52
COPA-206ENST00000545266 MYT1LQ9UL68 1186 aa11.82□□□□□ -0.52
COPA-206ENST00000545266 LILRB3O75022 631 aa11.81□□□□□ -0.52
COPA-206ENST00000545266 FDX1P10109 184 aa11.81□□□□□ -0.52
COPA-206ENST00000545266 PCDHGC3Q9UN70 934 aa11.81□□□□□ -0.52
COPA-206ENST00000545266 PCDHB15Q9Y5E8 787 aa11.81□□□□□ -0.52
COPA-206ENST00000545266 FBXO31Q5XUX0 539 aaPredicted RBP11.8□□□□□ -0.52
COPA-206ENST00000545266 SPNS2Q8IVW8 549 aa11.79□□□□□ -0.52
COPA-206ENST00000545266 HLA-CQ95604 372 aa11.79□□□□□ -0.52
COPA-206ENST00000545266 SALL2Q9Y467 1007 aaPredicted RBP11.77□□□□□ -0.53
COPA-206ENST00000545266 GUCA2AQ02747 115 aa11.76□□□□□ -0.53
COPA-206ENST00000545266 QPCTQ16769 361 aa11.76□□□□□ -0.53
COPA-206ENST00000545266 SLC27A5Q9Y2P5 690 aa11.75□□□□□ -0.53
COPA-206ENST00000545266 HRCP23327 699 aa11.74□□□□□ -0.53
COPA-206ENST00000545266 RFC5P40937 340 aa11.74□□□□□ -0.53
COPA-206ENST00000545266 ZBTB3Q9H5J0 574 aa11.74□□□□□ -0.53
COPA-206ENST00000545266 SPDYE5A6NIY4 337 aa11.73□□□□□ -0.53
COPA-206ENST00000545266 PUS10Q3MIT2 529 aaKnown RBP11.73□□□□□ -0.53
COPA-206ENST00000545266 PCDHB3Q9Y5E6 796 aa11.73□□□□□ -0.53
COPA-206ENST00000545266 Q3C1V9 767 aa11.72□□□□□ -0.53
COPA-206ENST00000545266 RTL5Q5HYW3 569 aaPredicted RBP11.72□□□□□ -0.53
COPA-206ENST00000545266 THAP11Q96EK4 314 aa11.72□□□□□ -0.53
COPA-206ENST00000545266 NR1I2O75469 434 aa11.71□□□□□ -0.53
COPA-206ENST00000545266 MTMR2Q13614 643 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms