RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 NKTRP30414 1462 aaKnown RBP19.09■□□□□ 0.65
ACTN1-206ENST00000544964 SLC52A1Q9NWF4 448 aa19.08■□□□□ 0.64
ACTN1-206ENST00000544964 TMEM94Q12767 1356 aa19.06■□□□□ 0.64
ACTN1-206ENST00000544964 CHD2O14647 1828 aaKnown RBP19.05■□□□□ 0.64
ACTN1-206ENST00000544964 SLC26A8Q96RN1 970 aa19.05■□□□□ 0.64
ACTN1-206ENST00000544964 RIMS2Q9UQ26 1411 aa19.04■□□□□ 0.64
ACTN1-206ENST00000544964 PLEKHG1Q9ULL1 1385 aa19.04■□□□□ 0.64
ACTN1-206ENST00000544964 KCNA6P17658 529 aa19.03■□□□□ 0.64
ACTN1-206ENST00000544964 ROBO1Q9Y6N7 1651 aa19.03■□□□□ 0.64
ACTN1-206ENST00000544964 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
ACTN1-206ENST00000544964 FAM135BQ49AJ0 1406 aa19■□□□□ 0.63
ACTN1-206ENST00000544964 SPHKAPQ2M3C7 1700 aa19■□□□□ 0.63
ACTN1-206ENST00000544964 DIP2AQ14689 1571 aa18.99■□□□□ 0.63
ACTN1-206ENST00000544964 ADAMTS13Q76LX8 1427 aa18.98■□□□□ 0.63
ACTN1-206ENST00000544964 RBM33Q96EV2 1170 aaKnown RBP18.97■□□□□ 0.63
ACTN1-206ENST00000544964 NUP155O75694 1391 aa18.96■□□□□ 0.63
ACTN1-206ENST00000544964 PROSER2Q86WR7 435 aaPredicted RBP18.95■□□□□ 0.62
ACTN1-206ENST00000544964 NRXN3Q9Y4C0 1643 aa18.94■□□□□ 0.62
ACTN1-206ENST00000544964 RRBP1Q9P2E9 1410 aaKnown RBP18.93■□□□□ 0.62
ACTN1-206ENST00000544964 PPP1R15AO75807 674 aaPredicted RBP18.93■□□□□ 0.62
ACTN1-206ENST00000544964 ITGAEP38570 1179 aa18.93■□□□□ 0.62
ACTN1-206ENST00000544964 MSH6P52701 1360 aa18.92■□□□□ 0.62
ACTN1-206ENST00000544964 BCANQ96GW7 911 aa18.91■□□□□ 0.62
ACTN1-206ENST00000544964 PHF23Q9BUL5 403 aaPredicted RBP18.91■□□□□ 0.62
ACTN1-206ENST00000544964 TRPM2O94759 1503 aa18.9■□□□□ 0.62
ACTN1-206ENST00000544964 CLTCL1P53675 1640 aa18.9■□□□□ 0.62
ACTN1-206ENST00000544964 CHGAP10645 457 aaKnown RBP18.9■□□□□ 0.62
ACTN1-206ENST00000544964 TBX22Q9Y458 520 aa18.9■□□□□ 0.62
ACTN1-206ENST00000544964 PHLPP1O60346 1717 aa18.9■□□□□ 0.62
ACTN1-206ENST00000544964 SETBP1Q9Y6X0 1596 aa18.89■□□□□ 0.62
ACTN1-206ENST00000544964 XRN1Q8IZH2 1706 aaKnown RBP18.89■□□□□ 0.61
ACTN1-206ENST00000544964 NUTM2DQ5VT03 806 aaPredicted RBP18.89■□□□□ 0.61
ACTN1-206ENST00000544964 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.89■□□□□ 0.61
ACTN1-206ENST00000544964 PIK3R4Q99570 1358 aa18.89■□□□□ 0.61
ACTN1-206ENST00000544964 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.88■□□□□ 0.61
ACTN1-206ENST00000544964 HDGFP51858 240 aaKnown RBP18.88■□□□□ 0.61
ACTN1-206ENST00000544964 NCOA3Q9Y6Q9 1424 aa18.88■□□□□ 0.61
ACTN1-206ENST00000544964 COL16A1Q07092 1604 aaPredicted RBP18.88■□□□□ 0.61
ACTN1-206ENST00000544964 NAIPQ13075 1403 aa18.87■□□□□ 0.61
ACTN1-206ENST00000544964 PTPRUQ92729 1446 aa18.87■□□□□ 0.61
ACTN1-206ENST00000544964 RGS17Q9UGC6 210 aaPredicted RBP18.86■□□□□ 0.61
ACTN1-206ENST00000544964 NEXMIFQ5QGS0 1516 aa18.84■□□□□ 0.61
ACTN1-206ENST00000544964 SLAIN2Q9P270 581 aa18.83■□□□□ 0.6
ACTN1-206ENST00000544964 AHDC1Q5TGY3 1603 aaPredicted RBP18.82■□□□□ 0.6
ACTN1-206ENST00000544964 KIF1BO60333 1816 aa18.81■□□□□ 0.6
ACTN1-206ENST00000544964 HFM1A2PYH4 1435 aa18.8■□□□□ 0.6
ACTN1-206ENST00000544964 SETD1AO15047 1707 aaKnown RBP18.8■□□□□ 0.6
ACTN1-206ENST00000544964 DCCP43146 1447 aa18.77■□□□□ 0.6
ACTN1-206ENST00000544964 SHPRHQ149N8 1683 aa18.77■□□□□ 0.6
ACTN1-206ENST00000544964 AMOTL2Q9Y2J4 779 aa18.77■□□□□ 0.6
ACTN1-206ENST00000544964 METP08581 1390 aa18.77■□□□□ 0.6
ACTN1-206ENST00000544964 JCADQ9P266 1359 aa18.77■□□□□ 0.6
ACTN1-206ENST00000544964 NALCNQ8IZF0 1738 aa18.77■□□□□ 0.59
ACTN1-206ENST00000544964 LRP6O75581 1613 aa18.75■□□□□ 0.59
ACTN1-206ENST00000544964 C19orf44Q9H6X5 657 aa18.75■□□□□ 0.59
ACTN1-206ENST00000544964 C14orf37Q86TY3 774 aa18.74■□□□□ 0.59
ACTN1-206ENST00000544964 CADPS2Q86UW7 1296 aa18.73■□□□□ 0.59
ACTN1-206ENST00000544964 NHSL1Q5SYE7 1610 aa18.73■□□□□ 0.59
ACTN1-206ENST00000544964 ASXL1Q8IXJ9 1541 aa18.73■□□□□ 0.59
ACTN1-206ENST00000544964 ZNF326Q5BKZ1 582 aaKnown RBP18.72■□□□□ 0.59
ACTN1-206ENST00000544964 POTEAQ6S8J7 498 aa18.72■□□□□ 0.59
ACTN1-206ENST00000544964 PPLO60437 1756 aa18.72■□□□□ 0.59
ACTN1-206ENST00000544964 MST1RQ04912 1400 aa18.72■□□□□ 0.59
ACTN1-206ENST00000544964 ADGRL3Q9HAR2 1447 aa18.71■□□□□ 0.59
ACTN1-206ENST00000544964 ATF3P18847 181 aa18.7■□□□□ 0.58
ACTN1-206ENST00000544964 BRINP3Q76B58 766 aa18.69■□□□□ 0.58
ACTN1-206ENST00000544964 PRAG1Q86YV5 1406 aa18.68■□□□□ 0.58
ACTN1-206ENST00000544964 PTCH1Q13635 1447 aa18.67■□□□□ 0.58
ACTN1-206ENST00000544964 SPATA31A6Q5VVP1 1343 aa18.66■□□□□ 0.58
ACTN1-206ENST00000544964 LAMC1P11047 1609 aa18.64■□□□□ 0.57
ACTN1-206ENST00000544964 IFT172Q9UG01 1749 aa18.64■□□□□ 0.57
ACTN1-206ENST00000544964 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
ACTN1-206ENST00000544964 SETD5Q9C0A6 1442 aa18.63■□□□□ 0.57
ACTN1-206ENST00000544964 SLC4A1APQ9BWU0 796 aaKnown RBP18.62■□□□□ 0.57
ACTN1-206ENST00000544964 ROBO2Q9HCK4 1378 aa18.62■□□□□ 0.57
ACTN1-206ENST00000544964 TRIM26Q12899 539 aaPredicted RBP18.6■□□□□ 0.57
ACTN1-206ENST00000544964 C1orf167Q5SNV9 1468 aa18.58■□□□□ 0.57
ACTN1-206ENST00000544964 SPATA31E1Q6ZUB1 1445 aa18.58■□□□□ 0.57
ACTN1-206ENST00000544964 RPGRIP1LQ68CZ1 1315 aa18.58■□□□□ 0.57
ACTN1-206ENST00000544964 VGFO15240 615 aaPredicted RBP18.58■□□□□ 0.56
ACTN1-206ENST00000544964 FOXD1Q16676 465 aa18.57■□□□□ 0.56
ACTN1-206ENST00000544964 CDC42BPGQ6DT37 1551 aa18.56■□□□□ 0.56
ACTN1-206ENST00000544964 CCDC144AA2RUR9 1427 aa18.56■□□□□ 0.56
ACTN1-206ENST00000544964 DDX17Q92841 729 aaKnown RBP18.55■□□□□ 0.56
ACTN1-206ENST00000544964 PNPLA6Q8IY17 1366 aa18.55■□□□□ 0.56
ACTN1-206ENST00000544964 KNDC1Q76NI1 1749 aa18.54■□□□□ 0.56
ACTN1-206ENST00000544964 MEX3CQ5U5Q3 659 aaKnown RBP18.54■□□□□ 0.56
ACTN1-206ENST00000544964 ADGRF5Q8IZF2 1346 aa18.51■□□□□ 0.55
ACTN1-206ENST00000544964 TECPR2O15040 1411 aa18.51■□□□□ 0.55
ACTN1-206ENST00000544964 ZNF772Q68DY9 489 aaPredicted RBP18.51■□□□□ 0.55
ACTN1-206ENST00000544964 PIK3C2GO75747 1445 aa18.5■□□□□ 0.55
ACTN1-206ENST00000544964 NUTM2BA6NNL0 878 aaPredicted RBP18.5■□□□□ 0.55
ACTN1-206ENST00000544964 NUTM2EB1AL46 878 aaPredicted RBP18.5■□□□□ 0.55
ACTN1-206ENST00000544964 NUTM2AQ8IVF1 878 aaPredicted RBP18.5■□□□□ 0.55
ACTN1-206ENST00000544964 COL22A1Q8NFW1 1626 aaPredicted RBP18.49■□□□□ 0.55
ACTN1-206ENST00000544964 LRRC59Q96AG4 307 aaKnown RBP18.49■□□□□ 0.55
ACTN1-206ENST00000544964 MPHOSPH9Q99550 1183 aa18.49■□□□□ 0.55
ACTN1-206ENST00000544964 CDK12Q9NYV4 1490 aaPredicted RBP18.49■□□□□ 0.55
ACTN1-206ENST00000544964 ANKRD30BQ9BXX2 1392 aa18.48■□□□□ 0.55
ACTN1-206ENST00000544964 AFF2P51816 1311 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms