RNA–Protein interactions for RNA: ENST00000544280.6

CALM1-203, Transcript of calmodulin 1, humanhuman

TSL 1 (best) BASIC

Gene CALM1, Length 1,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-203ENST00000544280 NWD1Q149M9 1564 aa34.74■■■■□ 3.15
CALM1-203ENST00000544280 BCANQ96GW7 911 aa34.73■■■■□ 3.15
CALM1-203ENST00000544280 ZFYVE9O95405 1425 aa34.72■■■■□ 3.15
CALM1-203ENST00000544280 FAM135BQ49AJ0 1406 aa34.72■■■■□ 3.15
CALM1-203ENST00000544280 UNC13BO14795 1591 aa34.72■■■■□ 3.15
CALM1-203ENST00000544280 TMEM131LA2VDJ0 1609 aa34.7■■■■□ 3.14
CALM1-203ENST00000544280 NKTRP30414 1462 aaKnown RBP34.69■■■■□ 3.14
CALM1-203ENST00000544280 RIMS2Q9UQ26 1411 aa34.68■■■■□ 3.14
CALM1-203ENST00000544280 ROBO1Q9Y6N7 1651 aa34.68■■■■□ 3.14
CALM1-203ENST00000544280 PLEKHG1Q9ULL1 1385 aa34.65■■■■□ 3.14
CALM1-203ENST00000544280 E9PCH4 1651 aa34.65■■■■□ 3.14
CALM1-203ENST00000544280 RGS17Q9UGC6 210 aaPredicted RBP34.64■■■■□ 3.14
CALM1-203ENST00000544280 PPP1R15AO75807 674 aaPredicted RBP34.62■■■■□ 3.13
CALM1-203ENST00000544280 CHD2O14647 1828 aaKnown RBP34.6■■■■□ 3.13
CALM1-203ENST00000544280 CHGAP10645 457 aaKnown RBP34.6■■■■□ 3.13
CALM1-203ENST00000544280 MSH6P52701 1360 aa34.58■■■■□ 3.13
CALM1-203ENST00000544280 ROCK1Q13464 1354 aa34.58■■■■□ 3.13
CALM1-203ENST00000544280 IQGAP3Q86VI3 1631 aa34.58■■■■□ 3.13
CALM1-203ENST00000544280 NUTM2DQ5VT03 806 aaPredicted RBP34.57■■■■□ 3.12
CALM1-203ENST00000544280 ITGAEP38570 1179 aa34.54■■■■□ 3.12
CALM1-203ENST00000544280 HDGFP51858 240 aaKnown RBP34.53■■■■□ 3.12
CALM1-203ENST00000544280 ADAMTS13Q76LX8 1427 aa34.51■■■■□ 3.12
CALM1-203ENST00000544280 PPARGC1BQ86YN6 1023 aaKnown RBP34.51■■■■□ 3.12
CALM1-203ENST00000544280 TBX22Q9Y458 520 aa34.5■■■■□ 3.11
CALM1-203ENST00000544280 NUP155O75694 1391 aa34.49■■■■□ 3.11
CALM1-203ENST00000544280 SLAIN2Q9P270 581 aa34.49■■■■□ 3.11
CALM1-203ENST00000544280 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.48■■■■□ 3.11
CALM1-203ENST00000544280 PHLPP1O60346 1717 aa34.47■■■■□ 3.11
CALM1-203ENST00000544280 DIP2AQ14689 1571 aa34.42■■■■□ 3.1
CALM1-203ENST00000544280 POTEAQ6S8J7 498 aa34.42■■■■□ 3.1
CALM1-203ENST00000544280 C14orf37Q86TY3 774 aa34.39■■■■□ 3.1
CALM1-203ENST00000544280 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.37■■■■□ 3.09
CALM1-203ENST00000544280 NCOA3Q9Y6Q9 1424 aa34.37■■■■□ 3.09
CALM1-203ENST00000544280 COL16A1Q07092 1604 aaPredicted RBP34.37■■■■□ 3.09
CALM1-203ENST00000544280 PTPRUQ92729 1446 aa34.36■■■■□ 3.09
CALM1-203ENST00000544280 PIK3R4Q99570 1358 aa34.35■■■■□ 3.09
CALM1-203ENST00000544280 TRPM2O94759 1503 aa34.35■■■■□ 3.09
CALM1-203ENST00000544280 JCADQ9P266 1359 aa34.34■■■■□ 3.09
CALM1-203ENST00000544280 SPHKAPQ2M3C7 1700 aa34.33■■■■□ 3.09
CALM1-203ENST00000544280 NRXN3Q9Y4C0 1643 aa34.31■■■■□ 3.08
CALM1-203ENST00000544280 AMOTL2Q9Y2J4 779 aa34.3■■■■□ 3.08
CALM1-203ENST00000544280 C19orf44Q9H6X5 657 aa34.29■■■■□ 3.08
CALM1-203ENST00000544280 CADPS2Q86UW7 1296 aa34.27■■■■□ 3.08
CALM1-203ENST00000544280 ATF3P18847 181 aa34.26■■■■□ 3.08
CALM1-203ENST00000544280 LRP6O75581 1613 aa34.24■■■■□ 3.07
CALM1-203ENST00000544280 XRN1Q8IZH2 1706 aaKnown RBP34.24■■■■□ 3.07
CALM1-203ENST00000544280 SETBP1Q9Y6X0 1596 aa34.23■■■■□ 3.07
CALM1-203ENST00000544280 AHDC1Q5TGY3 1603 aaPredicted RBP34.23■■■■□ 3.07
CALM1-203ENST00000544280 ZNF326Q5BKZ1 582 aaKnown RBP34.22■■■■□ 3.07
CALM1-203ENST00000544280 CLTCL1P53675 1640 aa34.21■■■■□ 3.07
CALM1-203ENST00000544280 SETD1AO15047 1707 aaKnown RBP34.2■■■■□ 3.07
CALM1-203ENST00000544280 METP08581 1390 aa34.18■■■■□ 3.06
CALM1-203ENST00000544280 BRINP3Q76B58 766 aa34.17■■■■□ 3.06
CALM1-203ENST00000544280 NEXMIFQ5QGS0 1516 aa34.15■■■■□ 3.06
CALM1-203ENST00000544280 SHPRHQ149N8 1683 aa34.15■■■■□ 3.06
CALM1-203ENST00000544280 RRBP1Q9P2E9 1410 aaKnown RBP34.14■■■■□ 3.06
CALM1-203ENST00000544280 SPATA31A6Q5VVP1 1343 aa34.14■■■■□ 3.06
CALM1-203ENST00000544280 DCCP43146 1447 aa34.13■■■■□ 3.05
CALM1-203ENST00000544280 NAIPQ13075 1403 aa34.13■■■■□ 3.05
CALM1-203ENST00000544280 MEX3CQ5U5Q3 659 aaKnown RBP34.1■■■■□ 3.05
CALM1-203ENST00000544280 ASXL1Q8IXJ9 1541 aa34.09■■■■□ 3.05
CALM1-203ENST00000544280 MST1RQ04912 1400 aa34.09■■■■□ 3.05
CALM1-203ENST00000544280 KIF1BO60333 1816 aa34.07■■■■□ 3.04
CALM1-203ENST00000544280 NALCNQ8IZF0 1738 aa34.04■■■■□ 3.04
CALM1-203ENST00000544280 ADGRL3Q9HAR2 1447 aa34.03■■■■□ 3.04
CALM1-203ENST00000544280 NHSL1Q5SYE7 1610 aa34.02■■■■□ 3.04
CALM1-203ENST00000544280 NUTM2BA6NNL0 878 aaPredicted RBP34.01■■■■□ 3.03
CALM1-203ENST00000544280 NUTM2EB1AL46 878 aaPredicted RBP34.01■■■■□ 3.03
CALM1-203ENST00000544280 NUTM2AQ8IVF1 878 aaPredicted RBP34.01■■■■□ 3.03
CALM1-203ENST00000544280 DDX17Q92841 729 aaKnown RBP33.99■■■■□ 3.03
CALM1-203ENST00000544280 ZNF772Q68DY9 489 aaPredicted RBP33.98■■■■□ 3.03
CALM1-203ENST00000544280 TRIM52Q96A61 297 aa33.98■■■■□ 3.03
CALM1-203ENST00000544280 SETD5Q9C0A6 1442 aa33.97■■■■□ 3.03
CALM1-203ENST00000544280 HFM1A2PYH4 1435 aa33.95■■■■□ 3.02
CALM1-203ENST00000544280 ROBO2Q9HCK4 1378 aa33.89■■■■□ 3.02
CALM1-203ENST00000544280 SLC4A1APQ9BWU0 796 aaKnown RBP33.89■■■■□ 3.02
CALM1-203ENST00000544280 PTCH1Q13635 1447 aa33.88■■■■□ 3.01
CALM1-203ENST00000544280 LRRC59Q96AG4 307 aaKnown RBP33.88■■■■□ 3.01
CALM1-203ENST00000544280 C1orf167Q5SNV9 1468 aa33.88■■■■□ 3.01
CALM1-203ENST00000544280 VGFO15240 615 aaPredicted RBP33.87■■■■□ 3.01
CALM1-203ENST00000544280 PNPLA6Q8IY17 1366 aa33.86■■■■□ 3.01
CALM1-203ENST00000544280 AFF2P51816 1311 aa33.86■■■■□ 3.01
CALM1-203ENST00000544280 PPLO60437 1756 aa33.85■■■■□ 3.01
CALM1-203ENST00000544280 RXRBP28702 533 aa33.84■■■■□ 3.01
CALM1-203ENST00000544280 FOXD1Q16676 465 aa33.83■■■■□ 3.01
CALM1-203ENST00000544280 UPF1Q92900 1129 aaKnown RBP eCLIP33.81■■■■□ 34e-14■■■■■ 47.1
CALM1-203ENST00000544280 RPGRIP1LQ68CZ1 1315 aa33.8■■■■□ 3
CALM1-203ENST00000544280 C8orf37Q96NL8 207 aa33.8■■■■□ 3
CALM1-203ENST00000544280 ORAI2Q96SN7 254 aa33.8■■■■□ 3
CALM1-203ENST00000544280 PRAG1Q86YV5 1406 aa33.79■■■■□ 3
CALM1-203ENST00000544280 LAMC1P11047 1609 aa33.78■■■■□ 3
CALM1-203ENST00000544280 CDK12Q9NYV4 1490 aaPredicted RBP33.74■■■□□ 2.99
CALM1-203ENST00000544280 SOS2Q07890 1332 aaPredicted RBP33.72■■■□□ 2.99
CALM1-203ENST00000544280 ADAMTS2O95450 1211 aa33.71■■■□□ 2.99
CALM1-203ENST00000544280 ADGRF5Q8IZF2 1346 aa33.7■■■□□ 2.99
CALM1-203ENST00000544280 QTRT2Q9H974 415 aaKnown RBP33.69■■■□□ 2.98
CALM1-203ENST00000544280 RGS12O14924 1447 aa33.68■■■□□ 2.98
CALM1-203ENST00000544280 CCDC144AA2RUR9 1427 aa33.66■■■□□ 2.98
CALM1-203ENST00000544280 RGL3Q3MIN7 710 aa33.66■■■□□ 2.98
CALM1-203ENST00000544280 CDC42BPGQ6DT37 1551 aa33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms