RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 SLAIN2Q9P270 581 aa18.42■□□□□ 0.54
GABPB1-206ENST00000543881 PHLPP1O60346 1717 aa18.42■□□□□ 0.54
GABPB1-206ENST00000543881 ANKRD30AQ9BXX3 1397 aa18.42■□□□□ 0.54
GABPB1-206ENST00000543881 SLC52A1Q9NWF4 448 aa18.4■□□□□ 0.54
GABPB1-206ENST00000543881 SETD1AO15047 1707 aaKnown RBP18.39■□□□□ 0.54
GABPB1-206ENST00000543881 JCADQ9P266 1359 aa18.39■□□□□ 0.53
GABPB1-206ENST00000543881 FAM50AQ14320 339 aaKnown RBP18.39■□□□□ 0.53
GABPB1-206ENST00000543881 ADGRL2O95490 1459 aa18.37■□□□□ 0.53
GABPB1-206ENST00000543881 CHD2O14647 1828 aaKnown RBP18.36■□□□□ 0.53
GABPB1-206ENST00000543881 PLEKHG1Q9ULL1 1385 aa18.35■□□□□ 0.53
GABPB1-206ENST00000543881 MYO5BQ9ULV0 1848 aa18.35■□□□□ 0.53
GABPB1-206ENST00000543881 ZFYVE9O95405 1425 aa18.35■□□□□ 0.53
GABPB1-206ENST00000543881 PPP1R15AO75807 674 aaPredicted RBP18.33■□□□□ 0.53
GABPB1-206ENST00000543881 COL16A1Q07092 1604 aaPredicted RBP18.33■□□□□ 0.53
GABPB1-206ENST00000543881 RPRD2Q5VT52 1461 aaKnown RBP18.33■□□□□ 0.52
GABPB1-206ENST00000543881 RIMS2Q9UQ26 1411 aa18.32■□□□□ 0.52
GABPB1-206ENST00000543881 HDGFP51858 240 aaKnown RBP18.32■□□□□ 0.52
GABPB1-206ENST00000543881 GCC2Q8IWJ2 1684 aa18.31■□□□□ 0.52
GABPB1-206ENST00000543881 C14orf37Q86TY3 774 aa18.3■□□□□ 0.52
GABPB1-206ENST00000543881 TBX22Q9Y458 520 aa18.3■□□□□ 0.52
GABPB1-206ENST00000543881 SPATA31A6Q5VVP1 1343 aa18.3■□□□□ 0.52
GABPB1-206ENST00000543881 NCOA3Q9Y6Q9 1424 aa18.3■□□□□ 0.52
GABPB1-206ENST00000543881 TMEM131LA2VDJ0 1609 aa18.3■□□□□ 0.52
GABPB1-206ENST00000543881 LRP6O75581 1613 aa18.3■□□□□ 0.52
GABPB1-206ENST00000543881 ANKRD50Q9ULJ7 1429 aa18.29■□□□□ 0.52
GABPB1-206ENST00000543881 MEX3CQ5U5Q3 659 aaKnown RBP18.29■□□□□ 0.52
GABPB1-206ENST00000543881 ZNF772Q68DY9 489 aaPredicted RBP18.27■□□□□ 0.52
GABPB1-206ENST00000543881 PPARGC1BQ86YN6 1023 aaKnown RBP18.27■□□□□ 0.52
GABPB1-206ENST00000543881 CADPS2Q86UW7 1296 aa18.26■□□□□ 0.51
GABPB1-206ENST00000543881 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.26■□□□□ 0.51
GABPB1-206ENST00000543881 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.26■□□□□ 0.51
GABPB1-206ENST00000543881 CHGAP10645 457 aaKnown RBP18.26■□□□□ 0.51
GABPB1-206ENST00000543881 C19orf44Q9H6X5 657 aa18.26■□□□□ 0.51
GABPB1-206ENST00000543881 AHDC1Q5TGY3 1603 aaPredicted RBP18.25■□□□□ 0.51
GABPB1-206ENST00000543881 ATF3P18847 181 aa18.25■□□□□ 0.51
GABPB1-206ENST00000543881 UPF1Q92900 1129 aaKnown RBP eCLIP18.25■□□□□ 0.51
GABPB1-206ENST00000543881 TRIM52Q96A61 297 aa18.25■□□□□ 0.51
GABPB1-206ENST00000543881 ADAMTS13Q76LX8 1427 aa18.24■□□□□ 0.51
GABPB1-206ENST00000543881 SHPRHQ149N8 1683 aa18.24■□□□□ 0.51
GABPB1-206ENST00000543881 NUTM2DQ5VT03 806 aaPredicted RBP18.24■□□□□ 0.51
GABPB1-206ENST00000543881 DIP2AQ14689 1571 aa18.22■□□□□ 0.51
GABPB1-206ENST00000543881 ROCK1Q13464 1354 aa18.21■□□□□ 0.51
GABPB1-206ENST00000543881 PIK3R4Q99570 1358 aa18.21■□□□□ 0.51
GABPB1-206ENST00000543881 RXRBP28702 533 aa18.2■□□□□ 0.5
GABPB1-206ENST00000543881 BRINP3Q76B58 766 aa18.19■□□□□ 0.5
GABPB1-206ENST00000543881 UNC13BO14795 1591 aa18.19■□□□□ 0.5
GABPB1-206ENST00000543881 E9PCH4 1651 aa18.19■□□□□ 0.5
GABPB1-206ENST00000543881 NUTM2BA6NNL0 878 aaPredicted RBP18.18■□□□□ 0.5
GABPB1-206ENST00000543881 NUTM2EB1AL46 878 aaPredicted RBP18.18■□□□□ 0.5
GABPB1-206ENST00000543881 ITGAEP38570 1179 aa18.18■□□□□ 0.5
GABPB1-206ENST00000543881 NUTM2AQ8IVF1 878 aaPredicted RBP18.18■□□□□ 0.5
GABPB1-206ENST00000543881 AMOTL2Q9Y2J4 779 aa18.18■□□□□ 0.5
GABPB1-206ENST00000543881 TRPM2O94759 1503 aa18.18■□□□□ 0.5
GABPB1-206ENST00000543881 PTPRUQ92729 1446 aa18.16■□□□□ 0.5
GABPB1-206ENST00000543881 CDK12Q9NYV4 1490 aaPredicted RBP18.14■□□□□ 0.49
GABPB1-206ENST00000543881 DCCP43146 1447 aa18.14■□□□□ 0.49
GABPB1-206ENST00000543881 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
GABPB1-206ENST00000543881 AFF2P51816 1311 aa18.12■□□□□ 0.49
GABPB1-206ENST00000543881 IQGAP3Q86VI3 1631 aa18.12■□□□□ 0.49
GABPB1-206ENST00000543881 SETD5Q9C0A6 1442 aa18.11■□□□□ 0.49
GABPB1-206ENST00000543881 XRN1Q8IZH2 1706 aaKnown RBP18.1■□□□□ 0.49
GABPB1-206ENST00000543881 NUP155O75694 1391 aa18.1■□□□□ 0.49
GABPB1-206ENST00000543881 MST1RQ04912 1400 aa18.1■□□□□ 0.49
GABPB1-206ENST00000543881 NHSL1Q5SYE7 1610 aa18.1■□□□□ 0.49
GABPB1-206ENST00000543881 NRXN3Q9Y4C0 1643 aa18.09■□□□□ 0.49
GABPB1-206ENST00000543881 LRRC59Q96AG4 307 aaKnown RBP18.08■□□□□ 0.49
GABPB1-206ENST00000543881 RRBP1Q9P2E9 1410 aaKnown RBP18.08■□□□□ 0.49
GABPB1-206ENST00000543881 C8orf37Q96NL8 207 aa18.07■□□□□ 0.48
GABPB1-206ENST00000543881 SETBP1Q9Y6X0 1596 aa18.07■□□□□ 0.48
GABPB1-206ENST00000543881 QTRT2Q9H974 415 aaKnown RBP18.06■□□□□ 0.48
GABPB1-206ENST00000543881 RGS12O14924 1447 aa18.05■□□□□ 0.48
GABPB1-206ENST00000543881 METP08581 1390 aa18.05■□□□□ 0.48
GABPB1-206ENST00000543881 DDX17Q92841 729 aaKnown RBP18.05■□□□□ 0.48
GABPB1-206ENST00000543881 PNPLA6Q8IY17 1366 aa18.04■□□□□ 0.48
GABPB1-206ENST00000543881 RBM6P78332 1123 aaKnown RBP18.04■□□□□ 0.48
GABPB1-206ENST00000543881 ZNF326Q5BKZ1 582 aaKnown RBP18.03■□□□□ 0.48
GABPB1-206ENST00000543881 ADGRL3Q9HAR2 1447 aa18.02■□□□□ 0.48
GABPB1-206ENST00000543881 SPHKAPQ2M3C7 1700 aa18.01■□□□□ 0.47
GABPB1-206ENST00000543881 NALCNQ8IZF0 1738 aa18■□□□□ 0.47
GABPB1-206ENST00000543881 NAIPQ13075 1403 aa18■□□□□ 0.47
GABPB1-206ENST00000543881 NGLY1Q96IV0 654 aa18■□□□□ 0.47
GABPB1-206ENST00000543881 ADAMTS2O95450 1211 aa17.99■□□□□ 0.47
GABPB1-206ENST00000543881 C1orf167Q5SNV9 1468 aa17.97■□□□□ 0.47
GABPB1-206ENST00000543881 NEXMIFQ5QGS0 1516 aa17.96■□□□□ 0.47
GABPB1-206ENST00000543881 LAMC1P11047 1609 aa17.94■□□□□ 0.46
GABPB1-206ENST00000543881 ATAD2Q6PL18 1390 aa17.94■□□□□ 0.46
GABPB1-206ENST00000543881 USP21Q9UK80 565 aa17.94■□□□□ 0.46
GABPB1-206ENST00000543881 CLTCL1P53675 1640 aa17.93■□□□□ 0.46
GABPB1-206ENST00000543881 ORAI2Q96SN7 254 aa17.93■□□□□ 0.46
GABPB1-206ENST00000543881 SOS2Q07890 1332 aaPredicted RBP17.93■□□□□ 0.46
GABPB1-206ENST00000543881 HFM1A2PYH4 1435 aa17.92■□□□□ 0.46
GABPB1-206ENST00000543881 TRPC5Q9UL62 973 aaPredicted RBP17.92■□□□□ 0.46
GABPB1-206ENST00000543881 PTCH1Q13635 1447 aa17.9■□□□□ 0.46
GABPB1-206ENST00000543881 KIF1BO60333 1816 aa17.9■□□□□ 0.46
GABPB1-206ENST00000543881 SRCAPQ6ZRS2 3230 aa17.9■□□□□ 0.46
GABPB1-206ENST00000543881 FNBP4Q8N3X1 1017 aaPredicted RBP17.89■□□□□ 0.45
GABPB1-206ENST00000543881 ROBO2Q9HCK4 1378 aa17.89■□□□□ 0.45
GABPB1-206ENST00000543881 ATRNO75882 1429 aa17.87■□□□□ 0.45
GABPB1-206ENST00000543881 COL22A1Q8NFW1 1626 aaPredicted RBP17.86■□□□□ 0.45
GABPB1-206ENST00000543881 VGFO15240 615 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms