RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 FAM161AQ3B820 660 aa10.54□□□□□ -0.72
MDM2-228ENST00000542502 Q6ZNB5 142 aa10.54□□□□□ -0.72
MDM2-228ENST00000542502 PCDHB3Q9Y5E6 796 aa10.53□□□□□ -0.72
MDM2-228ENST00000542502 V9GY48 417 aaPredicted RBP10.53□□□□□ -0.72
MDM2-228ENST00000542502 GGCXP38435 758 aa10.52□□□□□ -0.73
MDM2-228ENST00000542502 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.5□□□□□ -0.73
MDM2-228ENST00000542502 TESPA1A2RU30 521 aaPredicted RBP10.5□□□□□ -0.73
MDM2-228ENST00000542502 GFRA3O60609 400 aa10.5□□□□□ -0.73
MDM2-228ENST00000542502 TMUB1Q9BVT8 246 aa10.5□□□□□ -0.73
MDM2-228ENST00000542502 OATP04181 439 aa10.49□□□□□ -0.73
MDM2-228ENST00000542502 HIC1Q14526 733 aa10.49□□□□□ -0.73
MDM2-228ENST00000542502 BLOC1S3Q6QNY0 202 aa10.49□□□□□ -0.73
MDM2-228ENST00000542502 KMT5BQ4FZB7 885 aa10.48□□□□□ -0.73
MDM2-228ENST00000542502 SMYD5Q6GMV2 418 aa10.48□□□□□ -0.73
MDM2-228ENST00000542502 ACTN4O43707 911 aaKnown RBP10.47□□□□□ -0.73
MDM2-228ENST00000542502 RBM26Q5T8P6 1007 aaKnown RBP10.47□□□□□ -0.73
MDM2-228ENST00000542502 PXYLP1Q8TE99 480 aa10.47□□□□□ -0.73
MDM2-228ENST00000542502 CFHP08603 1231 aa10.46□□□□□ -0.73
MDM2-228ENST00000542502 SLC10A3P09131 477 aa10.45□□□□□ -0.74
MDM2-228ENST00000542502 METTL3Q86U44 580 aaKnown RBP10.44□□□□□ -0.74
MDM2-228ENST00000542502 NRG2O14511 850 aaPredicted RBP10.43□□□□□ -0.74
MDM2-228ENST00000542502 GNPATO15228 680 aa10.42□□□□□ -0.74
MDM2-228ENST00000542502 TLL1O43897 1013 aa10.42□□□□□ -0.74
MDM2-228ENST00000542502 RNF223E7ERA6 249 aa10.41□□□□□ -0.74
MDM2-228ENST00000542502 LCE2BO14633 110 aa10.4□□□□□ -0.74
MDM2-228ENST00000542502 GPR37O15354 613 aa10.4□□□□□ -0.74
MDM2-228ENST00000542502 FECHP22830 423 aa10.4□□□□□ -0.74
MDM2-228ENST00000542502 RSPH4AQ5TD94 716 aa10.4□□□□□ -0.74
MDM2-228ENST00000542502 TRAF7Q6Q0C0 670 aa10.4□□□□□ -0.74
MDM2-228ENST00000542502 NR1I2O75469 434 aa10.39□□□□□ -0.75
MDM2-228ENST00000542502 PDZRN3Q9UPQ7 1066 aa10.39□□□□□ -0.75
MDM2-228ENST00000542502 HAP1P54257 671 aaPredicted RBP10.37□□□□□ -0.75
MDM2-228ENST00000542502 ANKLE1Q8NAG6 615 aa10.37□□□□□ -0.75
MDM2-228ENST00000542502 S1PR4O95977 384 aa10.36□□□□□ -0.75
MDM2-228ENST00000542502 ADH1BP00325 375 aa10.36□□□□□ -0.75
MDM2-228ENST00000542502 SLC19A1P41440 591 aa10.36□□□□□ -0.75
MDM2-228ENST00000542502 EMID1Q96A84 441 aaPredicted RBP10.35□□□□□ -0.75
MDM2-228ENST00000542502 DAXXQ9UER7 740 aaPredicted RBP10.35□□□□□ -0.75
MDM2-228ENST00000542502 SCUBE3Q8IX30 993 aa10.34□□□□□ -0.75
MDM2-228ENST00000542502 PPEF1O14829 653 aaPredicted RBP10.33□□□□□ -0.76
MDM2-228ENST00000542502 KDM2AQ9Y2K7 1162 aa10.33□□□□□ -0.76
MDM2-228ENST00000542502 PUS10Q3MIT2 529 aaKnown RBP10.32□□□□□ -0.76
MDM2-228ENST00000542502 SPRYD7Q5W111 196 aa10.32□□□□□ -0.76
MDM2-228ENST00000542502 SLC6A16Q9GZN6 736 aa10.32□□□□□ -0.76
MDM2-228ENST00000542502 GPIHBP1Q8IV16 184 aa10.31□□□□□ -0.76
MDM2-228ENST00000542502 RDH13Q8NBN7 331 aa10.31□□□□□ -0.76
MDM2-228ENST00000542502 TRIM67Q6ZTA4 783 aa10.3□□□□□ -0.76
MDM2-228ENST00000542502 ZNF598Q86UK7 904 aaKnown RBP10.3□□□□□ -0.76
MDM2-228ENST00000542502 NLRP7Q8WX94 980 aa10.3□□□□□ -0.76
MDM2-228ENST00000542502 DDX11L8A8MPP1 907 aa10.29□□□□□ -0.76
MDM2-228ENST00000542502 LIAT1Q6ZQX7 453 aa10.29□□□□□ -0.76
MDM2-228ENST00000542502 PHOX2BQ99453 314 aa10.29□□□□□ -0.76
MDM2-228ENST00000542502 SPSB2Q99619 263 aa10.29□□□□□ -0.76
MDM2-228ENST00000542502 SULF1Q8IWU6 871 aa10.28□□□□□ -0.76
MDM2-228ENST00000542502 FUT2Q10981 343 aa10.27□□□□□ -0.77
MDM2-228ENST00000542502 MORN1Q5T089 497 aa10.27□□□□□ -0.77
MDM2-228ENST00000542502 ATP6V1AP38606 617 aa10.26□□□□□ -0.77
MDM2-228ENST00000542502 GCGRP47871 477 aa10.25□□□□□ -0.77
MDM2-228ENST00000542502 PRR20EP86478 221 aa10.25□□□□□ -0.77
MDM2-228ENST00000542502 PRR20CP86479 221 aa10.25□□□□□ -0.77
MDM2-228ENST00000542502 PRR20DP86480 221 aa10.25□□□□□ -0.77
MDM2-228ENST00000542502 PRR20BP86481 221 aa10.25□□□□□ -0.77
MDM2-228ENST00000542502 PRR20AP86496 221 aa10.25□□□□□ -0.77
MDM2-228ENST00000542502 ZNF697Q5TEC3 545 aa10.25□□□□□ -0.77
MDM2-228ENST00000542502 PLA2G2CQ5R387 149 aa10.24□□□□□ -0.77
MDM2-228ENST00000542502 THAP11Q96EK4 314 aa10.23□□□□□ -0.77
MDM2-228ENST00000542502 SLC27A5Q9Y2P5 690 aa10.22□□□□□ -0.77
MDM2-228ENST00000542502 GDF9O60383 454 aa10.21□□□□□ -0.77
MDM2-228ENST00000542502 FMNL1O95466 1100 aaPredicted RBP10.21□□□□□ -0.77
MDM2-228ENST00000542502 PKDCCQ504Y2 493 aa10.21□□□□□ -0.77
MDM2-228ENST00000542502 VSIG10Q8N0Z9 540 aa10.21□□□□□ -0.77
MDM2-228ENST00000542502 SALL2Q9Y467 1007 aaPredicted RBP10.21□□□□□ -0.77
MDM2-228ENST00000542502 TULP1O00294 542 aaPredicted RBP10.2□□□□□ -0.78
MDM2-228ENST00000542502 DGAT1O75907 488 aa10.2□□□□□ -0.78
MDM2-228ENST00000542502 MAP2K5Q13163 448 aa10.2□□□□□ -0.78
MDM2-228ENST00000542502 FAM160A2Q8N612 972 aaPredicted RBP10.19□□□□□ -0.78
MDM2-228ENST00000542502 TNFRSF10AO00220 468 aa10.18□□□□□ -0.78
MDM2-228ENST00000542502 GRIPAP1Q4V328 841 aa10.18□□□□□ -0.78
MDM2-228ENST00000542502 ZNF787Q6DD87 383 aa10.18□□□□□ -0.78
MDM2-228ENST00000542502 BRICD5Q6PL45 260 aa10.18□□□□□ -0.78
MDM2-228ENST00000542502 RPIAP49247 311 aa10.17□□□□□ -0.78
MDM2-228ENST00000542502 MYT1Q01538 1121 aa10.17□□□□□ -0.78
MDM2-228ENST00000542502 FCF1Q9Y324 198 aaKnown RBP10.17□□□□□ -0.78
MDM2-228ENST00000542502 IRF6O14896 467 aa10.16□□□□□ -0.78
MDM2-228ENST00000542502 NISCHQ9Y2I1 1504 aa10.16□□□□□ -0.78
MDM2-228ENST00000542502 CD46P15529 392 aa10.15□□□□□ -0.78
MDM2-228ENST00000542502 LMOD2Q6P5Q4 547 aa10.15□□□□□ -0.78
MDM2-228ENST00000542502 MINK1Q8N4C8 1332 aaPredicted RBP10.14□□□□□ -0.79
MDM2-228ENST00000542502 FAM187AA6NFU0 413 aa10.14□□□□□ -0.79
MDM2-228ENST00000542502 MSS51Q4VC12 460 aa10.14□□□□□ -0.79
MDM2-228ENST00000542502 PRDM9Q9NQV7 894 aa10.14□□□□□ -0.79
MDM2-228ENST00000542502 PKD2L1Q9P0L9 805 aa10.14□□□□□ -0.79
MDM2-228ENST00000542502 CD2BP2O95400 341 aaKnown RBP10.13□□□□□ -0.79
MDM2-228ENST00000542502 RNF19BQ6ZMZ0 732 aa10.13□□□□□ -0.79
MDM2-228ENST00000542502 FOXC1Q12948 553 aa10.12□□□□□ -0.79
MDM2-228ENST00000542502 Q3C1V9 767 aa10.12□□□□□ -0.79
MDM2-228ENST00000542502 KDM4AO75164 1064 aa10.11□□□□□ -0.79
MDM2-228ENST00000542502 MDM2Q00987 491 aaPredicted RBP10.11□□□□□ -0.79
MDM2-228ENST00000542502 CCDC102AQ96A19 550 aa10.08□□□□□ -0.8
MDM2-228ENST00000542502 ZBTB24O43167 697 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms