RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 ESCO1Q5FWF5 840 aa7.78□□□□□ -1.16
DMD-228ENST00000541735 EFCAB2Q5VUJ9 269 aa7.77□□□□□ -1.16
DMD-228ENST00000541735 HSP90AB2PQ58FF8 381 aa7.77□□□□□ -1.17
DMD-228ENST00000541735 MATR3P43243 847 aaKnown RBP eCLIP7.77□□□□□ -1.17
DMD-228ENST00000541735 RRP12Q5JTH9 1297 aaKnown RBP7.77□□□□□ -1.17
DMD-228ENST00000541735 RIC3Q7Z5B4 369 aa7.77□□□□□ -1.17
DMD-228ENST00000541735 EPS15P42566 896 aa7.76□□□□□ -1.17
DMD-228ENST00000541735 CPLX1O14810 134 aa7.76□□□□□ -1.17
DMD-228ENST00000541735 ATP2B1P20020 1258 aa7.76□□□□□ -1.17
DMD-228ENST00000541735 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.76□□□□□ -1.17
DMD-228ENST00000541735 ADAMTS2O95450 1211 aa7.76□□□□□ -1.17
DMD-228ENST00000541735 XPCQ01831 940 aaPredicted RBP7.76□□□□□ -1.17
DMD-228ENST00000541735 SPINK5Q9NQ38 1064 aaPredicted RBP7.76□□□□□ -1.17
DMD-228ENST00000541735 TNNT3P45378 269 aaPredicted RBP7.76□□□□□ -1.17
DMD-228ENST00000541735 PDE3BQ13370 1112 aa7.76□□□□□ -1.17
DMD-228ENST00000541735 PROSER2Q86WR7 435 aaPredicted RBP7.75□□□□□ -1.17
DMD-228ENST00000541735 ANO2Q9NQ90 1003 aa7.75□□□□□ -1.17
DMD-228ENST00000541735 E9PSI1 815 aa7.75□□□□□ -1.17
DMD-228ENST00000541735 TRDNQ13061 729 aa7.75□□□□□ -1.17
DMD-228ENST00000541735 PSMD1Q99460 953 aa7.75□□□□□ -1.17
DMD-228ENST00000541735 TTLL5Q6EMB2 1281 aa7.75□□□□□ -1.17
DMD-228ENST00000541735 DHX37Q8IY37 1157 aaKnown RBP7.75□□□□□ -1.17
DMD-228ENST00000541735 ZNF592Q92610 1267 aa7.75□□□□□ -1.17
DMD-228ENST00000541735 ZHX3Q9H4I2 956 aa7.75□□□□□ -1.17
DMD-228ENST00000541735 HDAC5Q9UQL6 1122 aa7.75□□□□□ -1.17
DMD-228ENST00000541735 IFIT2P09913 472 aaKnown RBP7.74□□□□□ -1.17
DMD-228ENST00000541735 DIAPH3Q9NSV4 1193 aa7.74□□□□□ -1.17
DMD-228ENST00000541735 ANKRD45Q5TZF3 282 aa7.74□□□□□ -1.17
DMD-228ENST00000541735 RWDD1Q9H446 243 aaPredicted RBP7.74□□□□□ -1.17
DMD-228ENST00000541735 NUP155O75694 1391 aa7.74□□□□□ -1.17
DMD-228ENST00000541735 C16orf71Q8IYS4 520 aaPredicted RBP7.73□□□□□ -1.17
DMD-228ENST00000541735 PIBF1Q8WXW3 757 aa7.73□□□□□ -1.17
DMD-228ENST00000541735 HMOX1P09601 288 aa7.73□□□□□ -1.17
DMD-228ENST00000541735 CCDC47Q96A33 483 aaKnown RBP7.73□□□□□ -1.17
DMD-228ENST00000541735 SCLT1Q96NL6 688 aa7.73□□□□□ -1.17
DMD-228ENST00000541735 PMFBP1Q8TBY8 1022 aa7.73□□□□□ -1.17
DMD-228ENST00000541735 CLEC11AQ9Y240 323 aa7.73□□□□□ -1.17
DMD-228ENST00000541735 TOM1L2Q6ZVM7 507 aa7.73□□□□□ -1.17
DMD-228ENST00000541735 KTN1Q86UP2 1357 aaKnown RBP7.73□□□□□ -1.17
DMD-228ENST00000541735 TRMT1LQ7Z2T5 733 aaKnown RBP7.72□□□□□ -1.17
DMD-228ENST00000541735 CHMP4AQ9BY43 222 aa7.72□□□□□ -1.17
DMD-228ENST00000541735 TPM1P09493 284 aa7.72□□□□□ -1.17
DMD-228ENST00000541735 KIF6Q6ZMV9 814 aa7.72□□□□□ -1.17
DMD-228ENST00000541735 GBP4Q96PP9 640 aa7.72□□□□□ -1.17
DMD-228ENST00000541735 G3BP1Q13283 466 aaKnown RBP eCLIP7.71□□□□□ -1.17
DMD-228ENST00000541735 FKBP5Q13451 457 aaPredicted RBP7.71□□□□□ -1.17
DMD-228ENST00000541735 NEBLO76041 1014 aa7.71□□□□□ -1.17
DMD-228ENST00000541735 NOP58Q9Y2X3 529 aaKnown RBP7.71□□□□□ -1.17
DMD-228ENST00000541735 BECN2A8MW95 431 aa7.71□□□□□ -1.17
DMD-228ENST00000541735 KRT18P05783 430 aaKnown RBP7.71□□□□□ -1.17
DMD-228ENST00000541735 HSPA5P11021 654 aaKnown RBP7.71□□□□□ -1.17
DMD-228ENST00000541735 OSCARQ8IYS5 282 aa7.71□□□□□ -1.17
DMD-228ENST00000541735 SYAP1Q96A49 352 aaPredicted RBP7.71□□□□□ -1.17
DMD-228ENST00000541735 VTI1AQ96AJ9 217 aa7.71□□□□□ -1.17
DMD-228ENST00000541735 CCDC85AQ96PX6 553 aaPredicted RBP7.71□□□□□ -1.17
DMD-228ENST00000541735 GOLGA6L19H0YKK7 550 aa7.71□□□□□ -1.18
DMD-228ENST00000541735 RSPH4AQ5TD94 716 aa7.71□□□□□ -1.18
DMD-228ENST00000541735 CPLX2Q6PUV4 134 aaKnown RBP7.71□□□□□ -1.18
DMD-228ENST00000541735 ANKRD62A6NC57 917 aa7.71□□□□□ -1.18
DMD-228ENST00000541735 BAZ1BQ9UIG0 1483 aaKnown RBP7.7□□□□□ -1.18
DMD-228ENST00000541735 OFD1O75665 1012 aa7.7□□□□□ -1.18
DMD-228ENST00000541735 WASHC2AQ641Q2 1341 aa7.7□□□□□ -1.18
DMD-228ENST00000541735 LMOD3Q0VAK6 560 aa7.7□□□□□ -1.18
DMD-228ENST00000541735 DNAJC2Q99543 621 aaKnown RBP7.7□□□□□ -1.18
DMD-228ENST00000541735 ABTB2Q8N961 1025 aa7.7□□□□□ -1.18
DMD-228ENST00000541735 CNNM1Q9NRU3 951 aa7.7□□□□□ -1.18
DMD-228ENST00000541735 KIF3AQ9Y496 699 aa7.7□□□□□ -1.18
DMD-228ENST00000541735 DDX58O95786 925 aaKnown RBP7.7□□□□□ -1.18
DMD-228ENST00000541735 HOMER1Q86YM7 354 aa7.7□□□□□ -1.18
DMD-228ENST00000541735 PDCL3Q9H2J4 239 aa7.7□□□□□ -1.18
DMD-228ENST00000541735 WDHD1O75717 1129 aaPredicted RBP7.69□□□□□ -1.18
DMD-228ENST00000541735 NLRP6P59044 892 aa7.69□□□□□ -1.18
DMD-228ENST00000541735 TSPYL4Q9UJ04 414 aa7.69□□□□□ -1.18
DMD-228ENST00000541735 IPO7O95373 1038 aaKnown RBP7.69□□□□□ -1.18
DMD-228ENST00000541735 CDK5RAP3Q96JB5 506 aa7.69□□□□□ -1.18
DMD-228ENST00000541735 CSPP1Q1MSJ5 1256 aa7.68□□□□□ -1.18
DMD-228ENST00000541735 PHF14O94880 888 aa7.68□□□□□ -1.18
DMD-228ENST00000541735 LRRFIP1Q32MZ4 808 aaKnown RBP7.68□□□□□ -1.18
DMD-228ENST00000541735 CARMIL2Q6F5E8 1435 aa7.68□□□□□ -1.18
DMD-228ENST00000541735 TDRD9Q8NDG6 1382 aaKnown RBP7.68□□□□□ -1.18
DMD-228ENST00000541735 MYL6BP14649 208 aa7.68□□□□□ -1.18
DMD-228ENST00000541735 BRPF1P55201 1214 aaPredicted RBP7.68□□□□□ -1.18
DMD-228ENST00000541735 CRBNQ96SW2 442 aa7.68□□□□□ -1.18
DMD-228ENST00000541735 RALYLQ86SE5 291 aaKnown RBP7.67□□□□□ -1.18
DMD-228ENST00000541735 BICD2Q8TD16 824 aa7.67□□□□□ -1.18
DMD-228ENST00000541735 LIG1P18858 919 aa7.67□□□□□ -1.18
DMD-228ENST00000541735 PTMSP20962 102 aa7.67□□□□□ -1.18
DMD-228ENST00000541735 USP5P45974 858 aa7.67□□□□□ -1.18
DMD-228ENST00000541735 KIF27Q86VH2 1401 aa7.67□□□□□ -1.18
DMD-228ENST00000541735 VPS37CA5D8V6 355 aaPredicted RBP7.67□□□□□ -1.18
DMD-228ENST00000541735 ST18O60284 1047 aa7.67□□□□□ -1.18
DMD-228ENST00000541735 FAM161AQ3B820 660 aa7.67□□□□□ -1.18
DMD-228ENST00000541735 CCDC70Q6NSX1 233 aa7.67□□□□□ -1.18
DMD-228ENST00000541735 RCAN3Q9UKA8 241 aa7.67□□□□□ -1.18
DMD-228ENST00000541735 NEFHP12036 1026 aa7.67□□□□□ -1.18
DMD-228ENST00000541735 ANKRD20A12PQ8NF67 263 aa7.67□□□□□ -1.18
DMD-228ENST00000541735 EIF3AQ14152 1382 aaKnown RBP7.66□□□□□ -1.18
DMD-228ENST00000541735 PDILTQ8N807 584 aa7.66□□□□□ -1.18
DMD-228ENST00000541735 CENPJQ9HC77 1338 aaPredicted RBP7.66□□□□□ -1.18
DMD-228ENST00000541735 SYCP1Q15431 976 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms