RNA–Protein interactions for RNA: ENST00000541588.5

RAB6A-207, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB6A, Length 758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-207ENST00000541588 MYO5BQ9ULV0 1848 aa28.27■■■□□ 2.12
RAB6A-207ENST00000541588 RGS17Q9UGC6 210 aaPredicted RBP28.26■■■□□ 2.11
RAB6A-207ENST00000541588 NWD1Q149M9 1564 aa28.25■■■□□ 2.11
RAB6A-207ENST00000541588 NKTRP30414 1462 aaKnown RBP28.25■■■□□ 2.11
RAB6A-207ENST00000541588 ROBO1Q9Y6N7 1651 aa28.25■■■□□ 2.11
RAB6A-207ENST00000541588 GCC2Q8IWJ2 1684 aa28.23■■■□□ 2.11
RAB6A-207ENST00000541588 ZFYVE9O95405 1425 aa28.21■■■□□ 2.11
RAB6A-207ENST00000541588 PPP1R15AO75807 674 aaPredicted RBP28.21■■■□□ 2.11
RAB6A-207ENST00000541588 RIMS2Q9UQ26 1411 aa28.19■■■□□ 2.1
RAB6A-207ENST00000541588 MSH6P52701 1360 aa28.19■■■□□ 2.1
RAB6A-207ENST00000541588 PLEKHG1Q9ULL1 1385 aa28.19■■■□□ 2.1
RAB6A-207ENST00000541588 TMEM131LA2VDJ0 1609 aa28.18■■■□□ 2.1
RAB6A-207ENST00000541588 HDGFP51858 240 aaKnown RBP28.17■■■□□ 2.1
RAB6A-207ENST00000541588 CHD2O14647 1828 aaKnown RBP28.17■■■□□ 2.1
RAB6A-207ENST00000541588 UNC13BO14795 1591 aa28.16■■■□□ 2.1
RAB6A-207ENST00000541588 CHGAP10645 457 aaKnown RBP28.16■■■□□ 2.1
RAB6A-207ENST00000541588 SLAIN2Q9P270 581 aa28.14■■■□□ 2.1
RAB6A-207ENST00000541588 E9PCH4 1651 aa28.12■■■□□ 2.09
RAB6A-207ENST00000541588 NUTM2DQ5VT03 806 aaPredicted RBP28.1■■■□□ 2.09
RAB6A-207ENST00000541588 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.1■■■□□ 2.09
RAB6A-207ENST00000541588 TBX22Q9Y458 520 aa28.1■■■□□ 2.09
RAB6A-207ENST00000541588 PHLPP1O60346 1717 aa28.09■■■□□ 2.09
RAB6A-207ENST00000541588 POTEAQ6S8J7 498 aa28.09■■■□□ 2.09
RAB6A-207ENST00000541588 ROCK1Q13464 1354 aa28.07■■■□□ 2.08
RAB6A-207ENST00000541588 IQGAP3Q86VI3 1631 aa28.06■■■□□ 2.08
RAB6A-207ENST00000541588 C14orf37Q86TY3 774 aa28.05■■■□□ 2.08
RAB6A-207ENST00000541588 ADAMTS13Q76LX8 1427 aa28.04■■■□□ 2.08
RAB6A-207ENST00000541588 JCADQ9P266 1359 aa28.02■■■□□ 2.08
RAB6A-207ENST00000541588 NCOA3Q9Y6Q9 1424 aa28.01■■■□□ 2.08
RAB6A-207ENST00000541588 NUP155O75694 1391 aa28.01■■■□□ 2.07
RAB6A-207ENST00000541588 ITGAEP38570 1179 aa28.01■■■□□ 2.07
RAB6A-207ENST00000541588 DIP2AQ14689 1571 aa28■■■□□ 2.07
RAB6A-207ENST00000541588 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.98■■■□□ 2.07
RAB6A-207ENST00000541588 PIK3R4Q99570 1358 aa27.98■■■□□ 2.07
RAB6A-207ENST00000541588 COL16A1Q07092 1604 aaPredicted RBP27.97■■■□□ 2.07
RAB6A-207ENST00000541588 ATF3P18847 181 aa27.95■■■□□ 2.06
RAB6A-207ENST00000541588 CADPS2Q86UW7 1296 aa27.95■■■□□ 2.06
RAB6A-207ENST00000541588 C19orf44Q9H6X5 657 aa27.95■■■□□ 2.06
RAB6A-207ENST00000541588 TRPM2O94759 1503 aa27.94■■■□□ 2.06
RAB6A-207ENST00000541588 AMOTL2Q9Y2J4 779 aa27.93■■■□□ 2.06
RAB6A-207ENST00000541588 PPARGC1BQ86YN6 1023 aaKnown RBP27.91■■■□□ 2.06
RAB6A-207ENST00000541588 PTPRUQ92729 1446 aa27.91■■■□□ 2.06
RAB6A-207ENST00000541588 AHDC1Q5TGY3 1603 aaPredicted RBP27.88■■■□□ 2.05
RAB6A-207ENST00000541588 SPATA31A6Q5VVP1 1343 aa27.88■■■□□ 2.05
RAB6A-207ENST00000541588 SETD1AO15047 1707 aaKnown RBP27.87■■■□□ 2.05
RAB6A-207ENST00000541588 SPHKAPQ2M3C7 1700 aa27.87■■■□□ 2.05
RAB6A-207ENST00000541588 LRP6O75581 1613 aa27.87■■■□□ 2.05
RAB6A-207ENST00000541588 MEX3CQ5U5Q3 659 aaKnown RBP27.86■■■□□ 2.05
RAB6A-207ENST00000541588 NRXN3Q9Y4C0 1643 aa27.85■■■□□ 2.05
RAB6A-207ENST00000541588 ZNF326Q5BKZ1 582 aaKnown RBP27.85■■■□□ 2.05
RAB6A-207ENST00000541588 BRINP3Q76B58 766 aa27.83■■■□□ 2.05
RAB6A-207ENST00000541588 SETBP1Q9Y6X0 1596 aa27.82■■■□□ 2.04
RAB6A-207ENST00000541588 SHPRHQ149N8 1683 aa27.82■■■□□ 2.04
RAB6A-207ENST00000541588 XRN1Q8IZH2 1706 aaKnown RBP27.82■■■□□ 2.04
RAB6A-207ENST00000541588 DCCP43146 1447 aa27.79■■■□□ 2.04
RAB6A-207ENST00000541588 METP08581 1390 aa27.78■■■□□ 2.04
RAB6A-207ENST00000541588 ZNF772Q68DY9 489 aaPredicted RBP27.77■■■□□ 2.04
RAB6A-207ENST00000541588 ASXL1Q8IXJ9 1541 aa27.75■■■□□ 2.03
RAB6A-207ENST00000541588 CLTCL1P53675 1640 aa27.74■■■□□ 2.03
RAB6A-207ENST00000541588 NUTM2BA6NNL0 878 aaPredicted RBP27.74■■■□□ 2.03
RAB6A-207ENST00000541588 NUTM2EB1AL46 878 aaPredicted RBP27.74■■■□□ 2.03
RAB6A-207ENST00000541588 NUTM2AQ8IVF1 878 aaPredicted RBP27.74■■■□□ 2.03
RAB6A-207ENST00000541588 MST1RQ04912 1400 aa27.74■■■□□ 2.03
RAB6A-207ENST00000541588 TRIM52Q96A61 297 aa27.72■■■□□ 2.03
RAB6A-207ENST00000541588 NEXMIFQ5QGS0 1516 aa27.72■■■□□ 2.03
RAB6A-207ENST00000541588 NHSL1Q5SYE7 1610 aa27.69■■■□□ 2.02
RAB6A-207ENST00000541588 KIF1BO60333 1816 aa27.69■■■□□ 2.02
RAB6A-207ENST00000541588 SETD5Q9C0A6 1442 aa27.68■■■□□ 2.02
RAB6A-207ENST00000541588 ADGRL3Q9HAR2 1447 aa27.68■■■□□ 2.02
RAB6A-207ENST00000541588 NALCNQ8IZF0 1738 aa27.66■■■□□ 2.02
RAB6A-207ENST00000541588 NAIPQ13075 1403 aa27.66■■■□□ 2.02
RAB6A-207ENST00000541588 RXRBP28702 533 aa27.65■■■□□ 2.02
RAB6A-207ENST00000541588 DDX17Q92841 729 aaKnown RBP27.65■■■□□ 2.02
RAB6A-207ENST00000541588 LRRC59Q96AG4 307 aaKnown RBP27.65■■■□□ 2.02
RAB6A-207ENST00000541588 RRBP1Q9P2E9 1410 aaKnown RBP27.63■■■□□ 2.01
RAB6A-207ENST00000541588 AFF2P51816 1311 aa27.63■■■□□ 2.01
RAB6A-207ENST00000541588 UPF1Q92900 1129 aaKnown RBP eCLIP27.62■■■□□ 2.01
RAB6A-207ENST00000541588 VGFO15240 615 aaPredicted RBP27.58■■■□□ 2.01
RAB6A-207ENST00000541588 PNPLA6Q8IY17 1366 aa27.58■■■□□ 2.01
RAB6A-207ENST00000541588 C8orf37Q96NL8 207 aa27.57■■■□□ 2
RAB6A-207ENST00000541588 C1orf167Q5SNV9 1468 aa27.57■■■□□ 2
RAB6A-207ENST00000541588 PTCH1Q13635 1447 aa27.55■■■□□ 2
RAB6A-207ENST00000541588 CDK12Q9NYV4 1490 aaPredicted RBP27.55■■■□□ 2
RAB6A-207ENST00000541588 ROBO2Q9HCK4 1378 aa27.54■■■□□ 2
RAB6A-207ENST00000541588 SLC4A1APQ9BWU0 796 aaKnown RBP27.51■■□□□ 1.99
RAB6A-207ENST00000541588 HFM1A2PYH4 1435 aa27.5■■□□□ 1.99
RAB6A-207ENST00000541588 RPGRIP1LQ68CZ1 1315 aa27.5■■□□□ 1.99
RAB6A-207ENST00000541588 ORAI2Q96SN7 254 aa27.5■■□□□ 1.99
RAB6A-207ENST00000541588 QTRT2Q9H974 415 aaKnown RBP27.5■■□□□ 1.99
RAB6A-207ENST00000541588 ADAMTS2O95450 1211 aa27.49■■□□□ 1.99
RAB6A-207ENST00000541588 PPLO60437 1756 aa27.48■■□□□ 1.99
RAB6A-207ENST00000541588 LAMC1P11047 1609 aa27.48■■□□□ 1.99
RAB6A-207ENST00000541588 RBM6P78332 1123 aaKnown RBP27.46■■□□□ 1.99
RAB6A-207ENST00000541588 NGLY1Q96IV0 654 aa27.46■■□□□ 1.99
RAB6A-207ENST00000541588 SOS2Q07890 1332 aaPredicted RBP27.45■■□□□ 1.99
RAB6A-207ENST00000541588 RGS12O14924 1447 aa27.45■■□□□ 1.98
RAB6A-207ENST00000541588 PRAG1Q86YV5 1406 aa27.45■■□□□ 1.98
RAB6A-207ENST00000541588 FOXD1Q16676 465 aa27.42■■□□□ 1.98
RAB6A-207ENST00000541588 USP21Q9UK80 565 aa27.37■■□□□ 1.97
RAB6A-207ENST00000541588 ESCO1Q5FWF5 840 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms