RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 ROBO1Q9Y6N7 1651 aa14.74□□□□□ -0.05
CHFR-219ENST00000541341 KANK1Q14678 1352 aa14.73□□□□□ -0.05
CHFR-219ENST00000541341 FAM50AQ14320 339 aaKnown RBP14.73□□□□□ -0.05
CHFR-219ENST00000541341 EID1Q9Y6B2 187 aa14.73□□□□□ -0.05
CHFR-219ENST00000541341 ARHGAP31Q2M1Z3 1444 aa14.73□□□□□ -0.05
CHFR-219ENST00000541341 KDM5AP29375 1690 aaKnown RBP14.72□□□□□ -0.05
CHFR-219ENST00000541341 SLC26A8Q96RN1 970 aa14.72□□□□□ -0.05
CHFR-219ENST00000541341 ROCK1Q13464 1354 aa14.72□□□□□ -0.05
CHFR-219ENST00000541341 IDI1Q13907 227 aa14.71□□□□□ -0.05
CHFR-219ENST00000541341 BCANQ96GW7 911 aa14.71□□□□□ -0.05
CHFR-219ENST00000541341 TMEM2Q9UHN6 1383 aa14.71□□□□□ -0.06
CHFR-219ENST00000541341 ADGRB3O60242 1522 aa14.7□□□□□ -0.06
CHFR-219ENST00000541341 ANKRD30AQ9BXX3 1397 aa14.7□□□□□ -0.06
CHFR-219ENST00000541341 DHX57Q6P158 1386 aaKnown RBP14.69□□□□□ -0.06
CHFR-219ENST00000541341 CHD2O14647 1828 aaKnown RBP14.69□□□□□ -0.06
CHFR-219ENST00000541341 TET3O43151 1660 aa14.68□□□□□ -0.06
CHFR-219ENST00000541341 PHLPP1O60346 1717 aa14.68□□□□□ -0.06
CHFR-219ENST00000541341 LMTK2Q8IWU2 1503 aa14.67□□□□□ -0.06
CHFR-219ENST00000541341 SETD1AO15047 1707 aaKnown RBP14.67□□□□□ -0.06
CHFR-219ENST00000541341 TMEM94Q12767 1356 aa14.67□□□□□ -0.06
CHFR-219ENST00000541341 E9PCH4 1651 aa14.66□□□□□ -0.06
CHFR-219ENST00000541341 PROSER2Q86WR7 435 aaPredicted RBP14.66□□□□□ -0.06
CHFR-219ENST00000541341 HFM1A2PYH4 1435 aa14.65□□□□□ -0.06
CHFR-219ENST00000541341 TMEM131LA2VDJ0 1609 aa14.64□□□□□ -0.07
CHFR-219ENST00000541341 NUTM2DQ5VT03 806 aaPredicted RBP14.64□□□□□ -0.07
CHFR-219ENST00000541341 RGS17Q9UGC6 210 aaPredicted RBP14.64□□□□□ -0.07
CHFR-219ENST00000541341 CHGAP10645 457 aaKnown RBP14.63□□□□□ -0.07
CHFR-219ENST00000541341 SUPT16HQ9Y5B9 1047 aaKnown RBP14.63□□□□□ -0.07
CHFR-219ENST00000541341 NOS1P29475 1434 aa14.63□□□□□ -0.07
CHFR-219ENST00000541341 NWD1Q149M9 1564 aa14.63□□□□□ -0.07
CHFR-219ENST00000541341 KCNA6P17658 529 aa14.62□□□□□ -0.07
CHFR-219ENST00000541341 NAIPQ13075 1403 aa14.62□□□□□ -0.07
CHFR-219ENST00000541341 UNC13BO14795 1591 aa14.6□□□□□ -0.07
CHFR-219ENST00000541341 ANKRD50Q9ULJ7 1429 aa14.6□□□□□ -0.07
CHFR-219ENST00000541341 PPP1R15AO75807 674 aaPredicted RBP14.6□□□□□ -0.07
CHFR-219ENST00000541341 ITGAEP38570 1179 aa14.59□□□□□ -0.07
CHFR-219ENST00000541341 ANP32EQ9BTT0 268 aa14.59□□□□□ -0.07
CHFR-219ENST00000541341 FAM135BQ49AJ0 1406 aa14.58□□□□□ -0.07
CHFR-219ENST00000541341 RIMS2Q9UQ26 1411 aa14.58□□□□□ -0.07
CHFR-219ENST00000541341 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.58□□□□□ -0.07
CHFR-219ENST00000541341 NEFLP07196 543 aa14.58□□□□□ -0.08
CHFR-219ENST00000541341 POTEAQ6S8J7 498 aa14.57□□□□□ -0.08
CHFR-219ENST00000541341 MSH6P52701 1360 aa14.57□□□□□ -0.08
CHFR-219ENST00000541341 ZFYVE9O95405 1425 aa14.57□□□□□ -0.08
CHFR-219ENST00000541341 NKTRP30414 1462 aaKnown RBP14.57□□□□□ -0.08
CHFR-219ENST00000541341 C14orf37Q86TY3 774 aa14.56□□□□□ -0.08
CHFR-219ENST00000541341 SLC52A1Q9NWF4 448 aa14.56□□□□□ -0.08
CHFR-219ENST00000541341 IQGAP3Q86VI3 1631 aa14.55□□□□□ -0.08
CHFR-219ENST00000541341 SETD5Q9C0A6 1442 aa14.55□□□□□ -0.08
CHFR-219ENST00000541341 RPRD2Q5VT52 1461 aaKnown RBP14.55□□□□□ -0.08
CHFR-219ENST00000541341 CCER2I3L3R5 266 aa14.54□□□□□ -0.08
CHFR-219ENST00000541341 COL16A1Q07092 1604 aaPredicted RBP14.54□□□□□ -0.08
CHFR-219ENST00000541341 SPHKAPQ2M3C7 1700 aa14.54□□□□□ -0.08
CHFR-219ENST00000541341 PLEKHG1Q9ULL1 1385 aa14.53□□□□□ -0.08
CHFR-219ENST00000541341 SLAIN2Q9P270 581 aa14.53□□□□□ -0.08
CHFR-219ENST00000541341 RAB3GAP2Q9H2M9 1393 aa14.49□□□□□ -0.09
CHFR-219ENST00000541341 ADAMTS13Q76LX8 1427 aa14.49□□□□□ -0.09
CHFR-219ENST00000541341 LRP6O75581 1613 aa14.48□□□□□ -0.09
CHFR-219ENST00000541341 NRXN3Q9Y4C0 1643 aa14.48□□□□□ -0.09
CHFR-219ENST00000541341 ERICH6BQ5W0A0 696 aa14.48□□□□□ -0.09
CHFR-219ENST00000541341 SHPRHQ149N8 1683 aa14.48□□□□□ -0.09
CHFR-219ENST00000541341 KIF1BO60333 1816 aa14.48□□□□□ -0.09
CHFR-219ENST00000541341 NUP155O75694 1391 aa14.47□□□□□ -0.09
CHFR-219ENST00000541341 HDGFP51858 240 aaKnown RBP14.47□□□□□ -0.09
CHFR-219ENST00000541341 DIP2AQ14689 1571 aa14.47□□□□□ -0.09
CHFR-219ENST00000541341 JCADQ9P266 1359 aa14.47□□□□□ -0.09
CHFR-219ENST00000541341 TRPM2O94759 1503 aa14.46□□□□□ -0.09
CHFR-219ENST00000541341 MEX3CQ5U5Q3 659 aaKnown RBP14.46□□□□□ -0.09
CHFR-219ENST00000541341 TSHZ2Q9NRE2 1034 aa14.46□□□□□ -0.09
CHFR-219ENST00000541341 TBX22Q9Y458 520 aa14.46□□□□□ -0.09
CHFR-219ENST00000541341 PTPRUQ92729 1446 aa14.46□□□□□ -0.09
CHFR-219ENST00000541341 NALCNQ8IZF0 1738 aa14.44□□□□□ -0.1
CHFR-219ENST00000541341 XRN1Q8IZH2 1706 aaKnown RBP14.44□□□□□ -0.1
CHFR-219ENST00000541341 NUTM2BA6NNL0 878 aaPredicted RBP14.44□□□□□ -0.1
CHFR-219ENST00000541341 NUTM2EB1AL46 878 aaPredicted RBP14.44□□□□□ -0.1
CHFR-219ENST00000541341 ATF3P18847 181 aa14.44□□□□□ -0.1
CHFR-219ENST00000541341 ZNF326Q5BKZ1 582 aaKnown RBP14.44□□□□□ -0.1
CHFR-219ENST00000541341 NUTM2AQ8IVF1 878 aaPredicted RBP14.44□□□□□ -0.1
CHFR-219ENST00000541341 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.44□□□□□ -0.1
CHFR-219ENST00000541341 TRIM52Q96A61 297 aa14.44□□□□□ -0.1
CHFR-219ENST00000541341 AMOTL2Q9Y2J4 779 aa14.44□□□□□ -0.1
CHFR-219ENST00000541341 CLTCL1P53675 1640 aa14.44□□□□□ -0.1
CHFR-219ENST00000541341 AHDC1Q5TGY3 1603 aaPredicted RBP14.43□□□□□ -0.1
CHFR-219ENST00000541341 NHSL1Q5SYE7 1610 aa14.41□□□□□ -0.1
CHFR-219ENST00000541341 ANP32CO43423 234 aa14.4□□□□□ -0.1
CHFR-219ENST00000541341 DDX17Q92841 729 aaKnown RBP14.4□□□□□ -0.1
CHFR-219ENST00000541341 C19orf44Q9H6X5 657 aa14.4□□□□□ -0.1
CHFR-219ENST00000541341 CADPS2Q86UW7 1296 aa14.39□□□□□ -0.11
CHFR-219ENST00000541341 ASXL1Q8IXJ9 1541 aa14.39□□□□□ -0.11
CHFR-219ENST00000541341 SETBP1Q9Y6X0 1596 aa14.39□□□□□ -0.11
CHFR-219ENST00000541341 BRINP3Q76B58 766 aa14.38□□□□□ -0.11
CHFR-219ENST00000541341 METP08581 1390 aa14.37□□□□□ -0.11
CHFR-219ENST00000541341 NEXMIFQ5QGS0 1516 aa14.37□□□□□ -0.11
CHFR-219ENST00000541341 NCOA3Q9Y6Q9 1424 aa14.37□□□□□ -0.11
CHFR-219ENST00000541341 PIK3R4Q99570 1358 aa14.36□□□□□ -0.11
CHFR-219ENST00000541341 SPATA31A6Q5VVP1 1343 aa14.36□□□□□ -0.11
CHFR-219ENST00000541341 MST1RQ04912 1400 aa14.34□□□□□ -0.11
CHFR-219ENST00000541341 PPLO60437 1756 aa14.34□□□□□ -0.11
CHFR-219ENST00000541341 ZNF772Q68DY9 489 aaPredicted RBP14.32□□□□□ -0.12
CHFR-219ENST00000541341 AFF2P51816 1311 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms