RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 RBM27Q9P2N5 1060 aaKnown RBP11.42□□□□□ -0.58
RAP1B-224ENST00000541216 CFAP44Q96MT7 982 aa11.41□□□□□ -0.58
RAP1B-224ENST00000541216 ANKLE1Q8NAG6 615 aa11.4□□□□□ -0.58
RAP1B-224ENST00000541216 SWT1Q5T5J6 900 aaKnown RBP11.39□□□□□ -0.59
RAP1B-224ENST00000541216 EMID1Q96A84 441 aaPredicted RBP11.39□□□□□ -0.59
RAP1B-224ENST00000541216 PCDHB3Q9Y5E6 796 aa11.39□□□□□ -0.59
RAP1B-224ENST00000541216 ZNF697Q5TEC3 545 aa11.38□□□□□ -0.59
RAP1B-224ENST00000541216 STK17AQ9UEE5 414 aa11.38□□□□□ -0.59
RAP1B-224ENST00000541216 AAASQ9NRG9 546 aa11.35□□□□□ -0.59
RAP1B-224ENST00000541216 GDF9O60383 454 aa11.34□□□□□ -0.59
RAP1B-224ENST00000541216 SLC24A1O60721 1099 aa11.34□□□□□ -0.59
RAP1B-224ENST00000541216 TNFRSF10AO00220 468 aa11.33□□□□□ -0.6
RAP1B-224ENST00000541216 WFS1O76024 890 aa11.33□□□□□ -0.6
RAP1B-224ENST00000541216 ST8SIA5O15466 376 aa11.32□□□□□ -0.6
RAP1B-224ENST00000541216 LIAT1Q6ZQX7 453 aa11.32□□□□□ -0.6
RAP1B-224ENST00000541216 GRXCR2A6NFK2 248 aa11.31□□□□□ -0.6
RAP1B-224ENST00000541216 BLOC1S3Q6QNY0 202 aa11.31□□□□□ -0.6
RAP1B-224ENST00000541216 INSM1Q01101 510 aaPredicted RBP11.3□□□□□ -0.6
RAP1B-224ENST00000541216 TSHZ2Q9NRE2 1034 aa11.3□□□□□ -0.6
RAP1B-224ENST00000541216 PRIM1P49642 420 aaKnown RBP11.29□□□□□ -0.6
RAP1B-224ENST00000541216 HAP1P54257 671 aaPredicted RBP11.28□□□□□ -0.6
RAP1B-224ENST00000541216 TTC13Q8NBP0 860 aa11.28□□□□□ -0.6
RAP1B-224ENST00000541216 PPEF1O14829 653 aaPredicted RBP11.27□□□□□ -0.61
RAP1B-224ENST00000541216 S1PR4O95977 384 aa11.27□□□□□ -0.61
RAP1B-224ENST00000541216 LMOD2Q6P5Q4 547 aa11.27□□□□□ -0.61
RAP1B-224ENST00000541216 CDHR5Q9HBB8 845 aa11.27□□□□□ -0.61
RAP1B-224ENST00000541216 CRIPAKQ8N1N5 446 aa11.26□□□□□ -0.61
RAP1B-224ENST00000541216 WIPF1O43516 503 aa11.25□□□□□ -0.61
RAP1B-224ENST00000541216 TLL1O43897 1013 aa11.25□□□□□ -0.61
RAP1B-224ENST00000541216 PADI6Q6TGC4 694 aa11.24□□□□□ -0.61
RAP1B-224ENST00000541216 C11orf95C9JLR9 678 aaPredicted RBP11.22□□□□□ -0.61
RAP1B-224ENST00000541216 OSBPP22059 807 aa11.22□□□□□ -0.61
RAP1B-224ENST00000541216 KMT5BQ4FZB7 885 aa11.21□□□□□ -0.61
RAP1B-224ENST00000541216 EYA1Q99502 592 aa11.21□□□□□ -0.61
RAP1B-224ENST00000541216 ADH1BP00325 375 aa11.2□□□□□ -0.62
RAP1B-224ENST00000541216 NFX1Q12986 1120 aaKnown RBP11.2□□□□□ -0.62
RAP1B-224ENST00000541216 AXIN1O15169 862 aa11.19□□□□□ -0.62
RAP1B-224ENST00000541216 ACTN4O43707 911 aaKnown RBP11.18□□□□□ -0.62
RAP1B-224ENST00000541216 AVPP01185 164 aa11.18□□□□□ -0.62
RAP1B-224ENST00000541216 FOXC1Q12948 553 aa11.18□□□□□ -0.62
RAP1B-224ENST00000541216 CTC1Q2NKJ3 1217 aa11.18□□□□□ -0.62
RAP1B-224ENST00000541216 SLC6A16Q9GZN6 736 aa11.18□□□□□ -0.62
RAP1B-224ENST00000541216 GMPR2Q9P2T1 348 aaKnown RBP11.18□□□□□ -0.62
RAP1B-224ENST00000541216 KDM2AQ9Y2K7 1162 aa11.18□□□□□ -0.62
RAP1B-224ENST00000541216 ARIH1Q9Y4X5 557 aaPredicted RBP11.18□□□□□ -0.62
RAP1B-224ENST00000541216 PKD2L1Q9P0L9 805 aa11.17□□□□□ -0.62
RAP1B-224ENST00000541216 NR1I2O75469 434 aa11.16□□□□□ -0.62
RAP1B-224ENST00000541216 NPDC1Q9NQX5 325 aaPredicted RBP11.16□□□□□ -0.62
RAP1B-224ENST00000541216 DACH1Q9UI36 760 aa11.16□□□□□ -0.62
RAP1B-224ENST00000541216 E2F4Q16254 413 aa11.15□□□□□ -0.62
RAP1B-224ENST00000541216 VSIG10Q8N0Z9 540 aa11.15□□□□□ -0.62
RAP1B-224ENST00000541216 DNAJB2P25686 324 aa11.14□□□□□ -0.63
RAP1B-224ENST00000541216 PLA2G2CQ5R387 149 aa11.13□□□□□ -0.63
RAP1B-224ENST00000541216 SMCPP49901 116 aaPredicted RBP11.12□□□□□ -0.63
RAP1B-224ENST00000541216 CYP4X1Q8N118 509 aa11.12□□□□□ -0.63
RAP1B-224ENST00000541216 RPIAP49247 311 aa11.11□□□□□ -0.63
RAP1B-224ENST00000541216 TOR4AQ9NXH8 423 aa11.11□□□□□ -0.63
RAP1B-224ENST00000541216 FAM181BA6NEQ2 426 aa11.1□□□□□ -0.63
RAP1B-224ENST00000541216 CFHP08603 1231 aa11.1□□□□□ -0.63
RAP1B-224ENST00000541216 CD2BP2O95400 341 aaKnown RBP11.08□□□□□ -0.64
RAP1B-224ENST00000541216 RBM46Q8TBY0 533 aaKnown RBP11.08□□□□□ -0.64
RAP1B-224ENST00000541216 TMEM134Q9H6X4 195 aa11.08□□□□□ -0.64
RAP1B-224ENST00000541216 LOC100996750A0A140TA64 210 aa11.07□□□□□ -0.64
RAP1B-224ENST00000541216 KRTAP4-6Q9BYQ5 205 aa11.07□□□□□ -0.64
RAP1B-224ENST00000541216 TERTO14746 1132 aaKnown RBP11.06□□□□□ -0.64
RAP1B-224ENST00000541216 SCUBE3Q8IX30 993 aa11.04□□□□□ -0.64
RAP1B-224ENST00000541216 WDR70Q9NW82 654 aa11.04□□□□□ -0.64
RAP1B-224ENST00000541216 SPSB2Q99619 263 aa11.03□□□□□ -0.64
RAP1B-224ENST00000541216 SENP2Q9HC62 589 aa11.02□□□□□ -0.65
RAP1B-224ENST00000541216 TTC24A2A3L6 582 aaPredicted RBP11□□□□□ -0.65
RAP1B-224ENST00000541216 RCCD1A6NED2 376 aa10.99□□□□□ -0.65
RAP1B-224ENST00000541216 ATP13A2Q9NQ11 1180 aa10.99□□□□□ -0.65
RAP1B-224ENST00000541216 SLC10A3P09131 477 aa10.97□□□□□ -0.65
RAP1B-224ENST00000541216 LCE2CQ5TA81 110 aa10.97□□□□□ -0.65
RAP1B-224ENST00000541216 RSPH4AQ5TD94 716 aa10.97□□□□□ -0.65
RAP1B-224ENST00000541216 TRIM47Q96LD4 638 aa10.97□□□□□ -0.65
RAP1B-224ENST00000541216 SNRPBP14678 240 aaKnown RBP10.96□□□□□ -0.65
RAP1B-224ENST00000541216 FCF1Q9Y324 198 aaKnown RBP10.96□□□□□ -0.65
RAP1B-224ENST00000541216 ADGRG1Q9Y653 693 aa10.96□□□□□ -0.65
RAP1B-224ENST00000541216 SLC16A10Q8TF71 515 aa10.95□□□□□ -0.66
RAP1B-224ENST00000541216 KIFC2Q96AC6 838 aa10.95□□□□□ -0.66
RAP1B-224ENST00000541216 ZBTB24O43167 697 aaPredicted RBP10.93□□□□□ -0.66
RAP1B-224ENST00000541216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.92□□□□□ -0.66
RAP1B-224ENST00000541216 PTGDRQ13258 359 aa10.92□□□□□ -0.66
RAP1B-224ENST00000541216 PUS10Q3MIT2 529 aaKnown RBP10.92□□□□□ -0.66
RAP1B-224ENST00000541216 SNIP1Q8TAD8 396 aaKnown RBP10.92□□□□□ -0.66
RAP1B-224ENST00000541216 SMPD1P17405 629 aa10.9□□□□□ -0.66
RAP1B-224ENST00000541216 ZSCAN1Q8NBB4 408 aa10.89□□□□□ -0.67
RAP1B-224ENST00000541216 WNT7AO00755 349 aa10.88□□□□□ -0.67
RAP1B-224ENST00000541216 KCNV2Q8TDN2 545 aa10.87□□□□□ -0.67
RAP1B-224ENST00000541216 FMNL1O95466 1100 aaPredicted RBP10.85□□□□□ -0.67
RAP1B-224ENST00000541216 FAM161AQ3B820 660 aa10.83□□□□□ -0.68
RAP1B-224ENST00000541216 IRF7Q92985 503 aa10.83□□□□□ -0.68
RAP1B-224ENST00000541216 THAP11Q96EK4 314 aa10.83□□□□□ -0.68
RAP1B-224ENST00000541216 NXF1Q9UBU9 619 aaKnown RBP10.83□□□□□ -0.68
RAP1B-224ENST00000541216 OATP04181 439 aa10.82□□□□□ -0.68
RAP1B-224ENST00000541216 MORN1Q5T089 497 aa10.82□□□□□ -0.68
RAP1B-224ENST00000541216 NPAS3Q8IXF0 933 aa10.82□□□□□ -0.68
RAP1B-224ENST00000541216 FAM160A2Q8N612 972 aaPredicted RBP10.82□□□□□ -0.68
RAP1B-224ENST00000541216 GMPRP36959 345 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms