RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 SLC4A3P48751 1232 aa10.57□□□□□ -0.72
SOX9-AS1-214ENST00000540802 APLP1P51693 650 aa10.57□□□□□ -0.72
SOX9-AS1-214ENST00000540802 TJAP1Q5JTD0 557 aa10.57□□□□□ -0.72
SOX9-AS1-214ENST00000540802 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
SOX9-AS1-214ENST00000540802 A0A0G2JS52 829 aa10.55□□□□□ -0.72
SOX9-AS1-214ENST00000540802 MTRQ99707 1265 aa10.52□□□□□ -0.73
SOX9-AS1-214ENST00000540802 PRR14Q9BWN1 585 aa10.51□□□□□ -0.73
SOX9-AS1-214ENST00000540802 IL21Q9HBE4 155 aa10.51□□□□□ -0.73
SOX9-AS1-214ENST00000540802 SLC10A3P09131 477 aa10.5□□□□□ -0.73
SOX9-AS1-214ENST00000540802 PHOX2BQ99453 314 aa10.5□□□□□ -0.73
SOX9-AS1-214ENST00000540802 RGS20O76081 388 aa10.49□□□□□ -0.73
SOX9-AS1-214ENST00000540802 MAP2K5Q13163 448 aa10.49□□□□□ -0.73
SOX9-AS1-214ENST00000540802 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
SOX9-AS1-214ENST00000540802 IRF6O14896 467 aa10.48□□□□□ -0.73
SOX9-AS1-214ENST00000540802 LMOD2Q6P5Q4 547 aa10.48□□□□□ -0.73
SOX9-AS1-214ENST00000540802 ZNF516Q92618 1163 aa10.47□□□□□ -0.73
SOX9-AS1-214ENST00000540802 MINK1Q8N4C8 1332 aaPredicted RBP10.47□□□□□ -0.73
SOX9-AS1-214ENST00000540802 ACTN4O43707 911 aaKnown RBP10.46□□□□□ -0.73
SOX9-AS1-214ENST00000540802 KMT5BQ4FZB7 885 aa10.45□□□□□ -0.74
SOX9-AS1-214ENST00000540802 NLRP7Q8WX94 980 aa10.45□□□□□ -0.74
SOX9-AS1-214ENST00000540802 CFHP08603 1231 aa10.44□□□□□ -0.74
SOX9-AS1-214ENST00000540802 PCDHB3Q9Y5E6 796 aa10.44□□□□□ -0.74
SOX9-AS1-214ENST00000540802 COPS2P61201 443 aa10.43□□□□□ -0.74
SOX9-AS1-214ENST00000540802 RSPH4AQ5TD94 716 aa10.43□□□□□ -0.74
SOX9-AS1-214ENST00000540802 BLOC1S3Q6QNY0 202 aa10.42□□□□□ -0.74
SOX9-AS1-214ENST00000540802 ZPR1O75312 459 aa10.41□□□□□ -0.74
SOX9-AS1-214ENST00000540802 NKX2-3Q8TAU0 364 aa10.4□□□□□ -0.74
SOX9-AS1-214ENST00000540802 DDX11L8A8MPP1 907 aa10.39□□□□□ -0.75
SOX9-AS1-214ENST00000540802 ZMYND10O75800 440 aa10.39□□□□□ -0.75
SOX9-AS1-214ENST00000540802 BARGINQ6ZT62 677 aa10.39□□□□□ -0.75
SOX9-AS1-214ENST00000540802 SULF1Q8IWU6 871 aa10.39□□□□□ -0.75
SOX9-AS1-214ENST00000540802 ZC3H15Q8WU90 426 aaKnown RBP10.39□□□□□ -0.75
SOX9-AS1-214ENST00000540802 CCDC102AQ96A19 550 aa10.39□□□□□ -0.75
SOX9-AS1-214ENST00000540802 GCGRP47871 477 aa10.37□□□□□ -0.75
SOX9-AS1-214ENST00000540802 PPP1R18Q6NYC8 613 aa10.37□□□□□ -0.75
SOX9-AS1-214ENST00000540802 RDH13Q8NBN7 331 aa10.37□□□□□ -0.75
SOX9-AS1-214ENST00000540802 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.35□□□□□ -0.75
SOX9-AS1-214ENST00000540802 NR1I2O75469 434 aa10.34□□□□□ -0.75
SOX9-AS1-214ENST00000540802 CD46P15529 392 aa10.33□□□□□ -0.76
SOX9-AS1-214ENST00000540802 MDM2Q00987 491 aaPredicted RBP10.33□□□□□ -0.76
SOX9-AS1-214ENST00000540802 SCUBE3Q8IX30 993 aa10.33□□□□□ -0.76
SOX9-AS1-214ENST00000540802 TMUB1Q9BVT8 246 aa10.33□□□□□ -0.76
SOX9-AS1-214ENST00000540802 SLC24A1O60721 1099 aa10.32□□□□□ -0.76
SOX9-AS1-214ENST00000540802 PUS10Q3MIT2 529 aaKnown RBP10.32□□□□□ -0.76
SOX9-AS1-214ENST00000540802 KRI1Q8N9T8 703 aaKnown RBP10.32□□□□□ -0.76
SOX9-AS1-214ENST00000540802 ATP6V1AP38606 617 aa10.31□□□□□ -0.76
SOX9-AS1-214ENST00000540802 FUT2Q10981 343 aa10.31□□□□□ -0.76
SOX9-AS1-214ENST00000540802 TLL1O43897 1013 aa10.3□□□□□ -0.76
SOX9-AS1-214ENST00000540802 MORN1Q5T089 497 aa10.3□□□□□ -0.76
SOX9-AS1-214ENST00000540802 CLCN1P35523 988 aa10.29□□□□□ -0.76
SOX9-AS1-214ENST00000540802 GGCXP38435 758 aa10.29□□□□□ -0.76
SOX9-AS1-214ENST00000540802 GPCPD1Q9NPB8 672 aa10.29□□□□□ -0.76
SOX9-AS1-214ENST00000540802 ADH1BP00325 375 aa10.28□□□□□ -0.76
SOX9-AS1-214ENST00000540802 FAM217BQ9NTX9 383 aaPredicted RBP10.28□□□□□ -0.76
SOX9-AS1-214ENST00000540802 REPIN1Q9BWE0 567 aaKnown RBP10.27□□□□□ -0.77
SOX9-AS1-214ENST00000540802 RNF223E7ERA6 249 aa10.25□□□□□ -0.77
SOX9-AS1-214ENST00000540802 AMHR2Q16671 573 aa10.25□□□□□ -0.77
SOX9-AS1-214ENST00000540802 THAP11Q96EK4 314 aa10.25□□□□□ -0.77
SOX9-AS1-214ENST00000540802 SLC27A5Q9Y2P5 690 aa10.25□□□□□ -0.77
SOX9-AS1-214ENST00000540802 SALL2Q9Y467 1007 aaPredicted RBP10.25□□□□□ -0.77
SOX9-AS1-214ENST00000540802 V9GY48 417 aaPredicted RBP10.25□□□□□ -0.77
SOX9-AS1-214ENST00000540802 GRIPAP1Q4V328 841 aa10.24□□□□□ -0.77
SOX9-AS1-214ENST00000540802 SPSB2Q99619 263 aa10.24□□□□□ -0.77
SOX9-AS1-214ENST00000540802 PRKD2Q9BZL6 878 aa10.24□□□□□ -0.77
SOX9-AS1-214ENST00000540802 KDM4AO75164 1064 aa10.23□□□□□ -0.77
SOX9-AS1-214ENST00000540802 S1PR4O95977 384 aa10.23□□□□□ -0.77
SOX9-AS1-214ENST00000540802 IRX2Q9BZI1 471 aaPredicted RBP10.23□□□□□ -0.77
SOX9-AS1-214ENST00000540802 BRICD5Q6PL45 260 aa10.22□□□□□ -0.77
SOX9-AS1-214ENST00000540802 ANKLE1Q8NAG6 615 aa10.22□□□□□ -0.77
SOX9-AS1-214ENST00000540802 SLC6A16Q9GZN6 736 aa10.22□□□□□ -0.77
SOX9-AS1-214ENST00000540802 USP46P62068 366 aa10.21□□□□□ -0.77
SOX9-AS1-214ENST00000540802 AK7Q96M32 723 aa10.21□□□□□ -0.77
SOX9-AS1-214ENST00000540802 TRIM66O15016 1216 aa10.2□□□□□ -0.78
SOX9-AS1-214ENST00000540802 FMNL1O95466 1100 aaPredicted RBP10.2□□□□□ -0.78
SOX9-AS1-214ENST00000540802 SSTR3P32745 418 aaPredicted RBP10.2□□□□□ -0.78
SOX9-AS1-214ENST00000540802 BCANQ96GW7 911 aa10.2□□□□□ -0.78
SOX9-AS1-214ENST00000540802 PPEF1O14829 653 aaPredicted RBP10.19□□□□□ -0.78
SOX9-AS1-214ENST00000540802 FAM160A2Q8N612 972 aaPredicted RBP10.19□□□□□ -0.78
SOX9-AS1-214ENST00000540802 EMID1Q96A84 441 aaPredicted RBP10.19□□□□□ -0.78
SOX9-AS1-214ENST00000540802 TTLL12Q14166 644 aaPredicted RBP10.17□□□□□ -0.78
SOX9-AS1-214ENST00000540802 RNF19BQ6ZMZ0 732 aa10.17□□□□□ -0.78
SOX9-AS1-214ENST00000540802 HOXA2O43364 376 aa10.16□□□□□ -0.78
SOX9-AS1-214ENST00000540802 Q3C1V9 767 aa10.16□□□□□ -0.78
SOX9-AS1-214ENST00000540802 GIGYF2Q6Y7W6 1299 aaKnown RBP10.16□□□□□ -0.78
SOX9-AS1-214ENST00000540802 SLC19A1P41440 591 aa10.15□□□□□ -0.78
SOX9-AS1-214ENST00000540802 HLA-CQ95604 372 aa10.15□□□□□ -0.78
SOX9-AS1-214ENST00000540802 MSS51Q4VC12 460 aa10.14□□□□□ -0.79
SOX9-AS1-214ENST00000540802 LIAT1Q6ZQX7 453 aa10.14□□□□□ -0.79
SOX9-AS1-214ENST00000540802 NUTM1Q86Y26 1132 aa10.14□□□□□ -0.79
SOX9-AS1-214ENST00000540802 PARP9Q8IXQ6 854 aa10.14□□□□□ -0.79
SOX9-AS1-214ENST00000540802 PLA2G2CQ5R387 149 aa10.13□□□□□ -0.79
SOX9-AS1-214ENST00000540802 SLC24A3Q9HC58 644 aa10.13□□□□□ -0.79
SOX9-AS1-214ENST00000540802 SPIRE2Q8WWL2 714 aa10.12□□□□□ -0.79
SOX9-AS1-214ENST00000540802 LAPTM4AQ15012 233 aa10.11□□□□□ -0.79
SOX9-AS1-214ENST00000540802 SPRYD7Q5W111 196 aa10.11□□□□□ -0.79
SOX9-AS1-214ENST00000540802 USB1Q9BQ65 265 aaKnown RBP10.11□□□□□ -0.79
SOX9-AS1-214ENST00000540802 GFRA3O60609 400 aa10.1□□□□□ -0.79
SOX9-AS1-214ENST00000540802 GUCA2AQ02747 115 aa10.1□□□□□ -0.79
SOX9-AS1-214ENST00000540802 PDE4DQ08499 809 aa10.1□□□□□ -0.79
SOX9-AS1-214ENST00000540802 PRDM9Q9NQV7 894 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms