RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.21□□□□□ -0.94
MDM2-227ENST00000540709 APLP1P51693 650 aa9.2□□□□□ -0.94
MDM2-227ENST00000540709 KRI1Q8N9T8 703 aaKnown RBP9.2□□□□□ -0.94
MDM2-227ENST00000540709 NECTIN2Q92692 538 aa9.2□□□□□ -0.94
MDM2-227ENST00000540709 KCNC4Q03721 635 aa9.19□□□□□ -0.94
MDM2-227ENST00000540709 COPS2P61201 443 aa9.17□□□□□ -0.94
MDM2-227ENST00000540709 DDX11L8A8MPP1 907 aa9.16□□□□□ -0.94
MDM2-227ENST00000540709 MAP2K5Q13163 448 aa9.16□□□□□ -0.94
MDM2-227ENST00000540709 RDH13Q8NBN7 331 aa9.16□□□□□ -0.94
MDM2-227ENST00000540709 PHOX2BQ99453 314 aa9.16□□□□□ -0.94
MDM2-227ENST00000540709 MTRQ99707 1265 aa9.16□□□□□ -0.94
MDM2-227ENST00000540709 IRF6O14896 467 aa9.15□□□□□ -0.94
MDM2-227ENST00000540709 CFHP08603 1231 aa9.15□□□□□ -0.94
MDM2-227ENST00000540709 RSPH4AQ5TD94 716 aa9.15□□□□□ -0.94
MDM2-227ENST00000540709 MINK1Q8N4C8 1332 aaPredicted RBP9.14□□□□□ -0.95
MDM2-227ENST00000540709 ITGBL1O95965 494 aaPredicted RBP9.14□□□□□ -0.95
MDM2-227ENST00000540709 SLC10A3P09131 477 aa9.14□□□□□ -0.95
MDM2-227ENST00000540709 KMT5BQ4FZB7 885 aa9.14□□□□□ -0.95
MDM2-227ENST00000540709 ZNF516Q92618 1163 aa9.14□□□□□ -0.95
MDM2-227ENST00000540709 IL21Q9HBE4 155 aa9.14□□□□□ -0.95
MDM2-227ENST00000540709 DAXXQ9UER7 740 aaPredicted RBP9.14□□□□□ -0.95
MDM2-227ENST00000540709 PCDHB3Q9Y5E6 796 aa9.14□□□□□ -0.95
MDM2-227ENST00000540709 TJAP1Q5JTD0 557 aa9.13□□□□□ -0.95
MDM2-227ENST00000540709 PRR14Q9BWN1 585 aa9.13□□□□□ -0.95
MDM2-227ENST00000540709 ZC3H15Q8WU90 426 aaKnown RBP9.12□□□□□ -0.95
MDM2-227ENST00000540709 CCDC102AQ96A19 550 aa9.12□□□□□ -0.95
MDM2-227ENST00000540709 MDM2Q00987 491 aaPredicted RBP9.11□□□□□ -0.95
MDM2-227ENST00000540709 A0A0G2JS52 829 aa9.1□□□□□ -0.95
MDM2-227ENST00000540709 IFFO2Q5TF58 517 aa9.1□□□□□ -0.95
MDM2-227ENST00000540709 BLOC1S3Q6QNY0 202 aa9.1□□□□□ -0.95
MDM2-227ENST00000540709 ACTN4O43707 911 aaKnown RBP9.08□□□□□ -0.96
MDM2-227ENST00000540709 PUS10Q3MIT2 529 aaKnown RBP9.08□□□□□ -0.96
MDM2-227ENST00000540709 SULF1Q8IWU6 871 aa9.08□□□□□ -0.96
MDM2-227ENST00000540709 NKX2-3Q8TAU0 364 aa9.08□□□□□ -0.96
MDM2-227ENST00000540709 BARGINQ6ZT62 677 aa9.07□□□□□ -0.96
MDM2-227ENST00000540709 BCANQ96GW7 911 aa9.07□□□□□ -0.96
MDM2-227ENST00000540709 ZMYND10O75800 440 aa9.06□□□□□ -0.96
MDM2-227ENST00000540709 ZPR1O75312 459 aa9.05□□□□□ -0.96
MDM2-227ENST00000540709 TLL1O43897 1013 aa9.03□□□□□ -0.96
MDM2-227ENST00000540709 FUT2Q10981 343 aa9.03□□□□□ -0.96
MDM2-227ENST00000540709 TTLL12Q14166 644 aaPredicted RBP9.03□□□□□ -0.96
MDM2-227ENST00000540709 NR1I2O75469 434 aa9.02□□□□□ -0.97
MDM2-227ENST00000540709 CLCN1P35523 988 aa9.02□□□□□ -0.97
MDM2-227ENST00000540709 GCGRP47871 477 aa9.02□□□□□ -0.97
MDM2-227ENST00000540709 PPP1R18Q6NYC8 613 aa9.02□□□□□ -0.97
MDM2-227ENST00000540709 GPCPD1Q9NPB8 672 aa9.02□□□□□ -0.97
MDM2-227ENST00000540709 SCUBE3Q8IX30 993 aa9.01□□□□□ -0.97
MDM2-227ENST00000540709 EIF4ENIF1Q9NRA8 985 aaKnown RBP9□□□□□ -0.97
MDM2-227ENST00000540709 GGCXP38435 758 aa8.99□□□□□ -0.97
MDM2-227ENST00000540709 ATP6V1AP38606 617 aa8.99□□□□□ -0.97
MDM2-227ENST00000540709 CD46P15529 392 aa8.98□□□□□ -0.97
MDM2-227ENST00000540709 REPIN1Q9BWE0 567 aaKnown RBP8.98□□□□□ -0.97
MDM2-227ENST00000540709 GRIPAP1Q4V328 841 aa8.97□□□□□ -0.97
MDM2-227ENST00000540709 AK7Q96M32 723 aa8.97□□□□□ -0.97
MDM2-227ENST00000540709 SLC24A3Q9HC58 644 aa8.97□□□□□ -0.97
MDM2-227ENST00000540709 KDM4AO75164 1064 aa8.96□□□□□ -0.98
MDM2-227ENST00000540709 SSTR3P32745 418 aaPredicted RBP8.96□□□□□ -0.98
MDM2-227ENST00000540709 MORN1Q5T089 497 aa8.96□□□□□ -0.98
MDM2-227ENST00000540709 FAM217BQ9NTX9 383 aaPredicted RBP8.96□□□□□ -0.98
MDM2-227ENST00000540709 SLC27A5Q9Y2P5 690 aa8.96□□□□□ -0.98
MDM2-227ENST00000540709 PPEF1O14829 653 aaPredicted RBP8.95□□□□□ -0.98
MDM2-227ENST00000540709 TRIM66O15016 1216 aa8.95□□□□□ -0.98
MDM2-227ENST00000540709 RGS20O76081 388 aa8.95□□□□□ -0.98
MDM2-227ENST00000540709 S1PR4O95977 384 aa8.95□□□□□ -0.98
MDM2-227ENST00000540709 NUTM1Q86Y26 1132 aa8.95□□□□□ -0.98
MDM2-227ENST00000540709 SPSB2Q99619 263 aa8.95□□□□□ -0.98
MDM2-227ENST00000540709 PRKD2Q9BZL6 878 aa8.95□□□□□ -0.98
MDM2-227ENST00000540709 ADH1BP00325 375 aa8.94□□□□□ -0.98
MDM2-227ENST00000540709 GIGYF2Q6Y7W6 1299 aaKnown RBP8.93□□□□□ -0.98
MDM2-227ENST00000540709 SLC6A16Q9GZN6 736 aa8.93□□□□□ -0.98
MDM2-227ENST00000540709 RNF223E7ERA6 249 aa8.92□□□□□ -0.98
MDM2-227ENST00000540709 FMNL1O95466 1100 aaPredicted RBP8.92□□□□□ -0.98
MDM2-227ENST00000540709 AMHR2Q16671 573 aa8.92□□□□□ -0.98
MDM2-227ENST00000540709 HLA-CQ95604 372 aa8.92□□□□□ -0.98
MDM2-227ENST00000540709 TMUB1Q9BVT8 246 aa8.92□□□□□ -0.98
MDM2-227ENST00000540709 GUCA2AQ02747 115 aa8.9□□□□□ -0.98
MDM2-227ENST00000540709 RNF19BQ6ZMZ0 732 aa8.9□□□□□ -0.98
MDM2-227ENST00000540709 USP46P62068 366 aa8.89□□□□□ -0.99
MDM2-227ENST00000540709 PARP9Q8IXQ6 854 aa8.89□□□□□ -0.99
MDM2-227ENST00000540709 BEGAINQ9BUH8 593 aa8.89□□□□□ -0.99
MDM2-227ENST00000540709 IRX2Q9BZI1 471 aaPredicted RBP8.89□□□□□ -0.99
MDM2-227ENST00000540709 HOXA2O43364 376 aa8.88□□□□□ -0.99
MDM2-227ENST00000540709 PDE4DQ08499 809 aa8.88□□□□□ -0.99
MDM2-227ENST00000540709 Q3C1V9 767 aa8.88□□□□□ -0.99
MDM2-227ENST00000540709 BRICD5Q6PL45 260 aa8.87□□□□□ -0.99
MDM2-227ENST00000540709 THAP11Q96EK4 314 aa8.87□□□□□ -0.99
MDM2-227ENST00000540709 FAM160A2Q8N612 972 aaPredicted RBP8.86□□□□□ -0.99
MDM2-227ENST00000540709 NDUFV2P19404 249 aa8.85□□□□□ -0.99
MDM2-227ENST00000540709 SLC19A1P41440 591 aa8.85□□□□□ -0.99
MDM2-227ENST00000540709 ANKLE1Q8NAG6 615 aa8.85□□□□□ -0.99
MDM2-227ENST00000540709 SPIRE2Q8WWL2 714 aa8.85□□□□□ -0.99
MDM2-227ENST00000540709 SYMPKQ92797 1274 aaKnown RBP8.85□□□□□ -0.99
MDM2-227ENST00000540709 PRDM9Q9NQV7 894 aa8.85□□□□□ -0.99
MDM2-227ENST00000540709 FDX1P10109 184 aa8.84□□□□□ -0.99
MDM2-227ENST00000540709 MS4A1P11836 297 aa8.84□□□□□ -0.99
MDM2-227ENST00000540709 V9GY48 417 aaPredicted RBP8.84□□□□□ -0.99
MDM2-227ENST00000540709 C6orf229H3BNL8 230 aa8.83□□□□□ -1
MDM2-227ENST00000540709 USB1Q9BQ65 265 aaKnown RBP8.83□□□□□ -1
MDM2-227ENST00000540709 FCF1Q9Y324 198 aaKnown RBP8.83□□□□□ -1
MDM2-227ENST00000540709 SALL2Q9Y467 1007 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms