RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 E9PCH4 1651 aa16.83■□□□□ 0.28
DDB1-214ENST00000539426 KCNA6P17658 529 aa16.83■□□□□ 0.28
DDB1-214ENST00000539426 RBM33Q96EV2 1170 aaKnown RBP16.81■□□□□ 0.28
DDB1-214ENST00000539426 NKTRP30414 1462 aaKnown RBP16.8■□□□□ 0.28
DDB1-214ENST00000539426 RIMS2Q9UQ26 1411 aa16.8■□□□□ 0.28
DDB1-214ENST00000539426 IQGAP3Q86VI3 1631 aa16.8■□□□□ 0.28
DDB1-214ENST00000539426 CHD2O14647 1828 aaKnown RBP16.8■□□□□ 0.28
DDB1-214ENST00000539426 FAM135BQ49AJ0 1406 aa16.79■□□□□ 0.28
DDB1-214ENST00000539426 ROCK1Q13464 1354 aa16.79■□□□□ 0.28
DDB1-214ENST00000539426 ROBO1Q9Y6N7 1651 aa16.79■□□□□ 0.28
DDB1-214ENST00000539426 PROSER2Q86WR7 435 aaPredicted RBP16.79■□□□□ 0.28
DDB1-214ENST00000539426 PHF23Q9BUL5 403 aaPredicted RBP16.79■□□□□ 0.28
DDB1-214ENST00000539426 PLEKHG1Q9ULL1 1385 aa16.78■□□□□ 0.28
DDB1-214ENST00000539426 BCANQ96GW7 911 aa16.77■□□□□ 0.28
DDB1-214ENST00000539426 PPP1R15AO75807 674 aaPredicted RBP16.74■□□□□ 0.27
DDB1-214ENST00000539426 ADAMTS13Q76LX8 1427 aa16.73■□□□□ 0.27
DDB1-214ENST00000539426 CHGAP10645 457 aaKnown RBP16.73■□□□□ 0.27
DDB1-214ENST00000539426 PPARGC1BQ86YN6 1023 aaKnown RBP16.73■□□□□ 0.27
DDB1-214ENST00000539426 ITGAEP38570 1179 aa16.72■□□□□ 0.27
DDB1-214ENST00000539426 NUTM2DQ5VT03 806 aaPredicted RBP16.72■□□□□ 0.27
DDB1-214ENST00000539426 RGS17Q9UGC6 210 aaPredicted RBP16.72■□□□□ 0.27
DDB1-214ENST00000539426 NUP155O75694 1391 aa16.72■□□□□ 0.27
DDB1-214ENST00000539426 MSH6P52701 1360 aa16.72■□□□□ 0.27
DDB1-214ENST00000539426 HDGFP51858 240 aaKnown RBP16.7■□□□□ 0.26
DDB1-214ENST00000539426 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
DDB1-214ENST00000539426 DIP2AQ14689 1571 aa16.69■□□□□ 0.26
DDB1-214ENST00000539426 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.69■□□□□ 0.26
DDB1-214ENST00000539426 PHLPP1O60346 1717 aa16.68■□□□□ 0.26
DDB1-214ENST00000539426 SPHKAPQ2M3C7 1700 aa16.68■□□□□ 0.26
DDB1-214ENST00000539426 SLAIN2Q9P270 581 aa16.66■□□□□ 0.26
DDB1-214ENST00000539426 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.66■□□□□ 0.26
DDB1-214ENST00000539426 NRXN3Q9Y4C0 1643 aa16.66■□□□□ 0.26
DDB1-214ENST00000539426 NCOA3Q9Y6Q9 1424 aa16.65■□□□□ 0.26
DDB1-214ENST00000539426 TRPM2O94759 1503 aa16.65■□□□□ 0.26
DDB1-214ENST00000539426 PIK3R4Q99570 1358 aa16.64■□□□□ 0.26
DDB1-214ENST00000539426 PTPRUQ92729 1446 aa16.64■□□□□ 0.25
DDB1-214ENST00000539426 COL16A1Q07092 1604 aaPredicted RBP16.64■□□□□ 0.25
DDB1-214ENST00000539426 POTEAQ6S8J7 498 aa16.62■□□□□ 0.25
DDB1-214ENST00000539426 XRN1Q8IZH2 1706 aaKnown RBP16.62■□□□□ 0.25
DDB1-214ENST00000539426 RRBP1Q9P2E9 1410 aaKnown RBP16.62■□□□□ 0.25
DDB1-214ENST00000539426 SETBP1Q9Y6X0 1596 aa16.61■□□□□ 0.25
DDB1-214ENST00000539426 CLTCL1P53675 1640 aa16.61■□□□□ 0.25
DDB1-214ENST00000539426 C14orf37Q86TY3 774 aa16.61■□□□□ 0.25
DDB1-214ENST00000539426 JCADQ9P266 1359 aa16.6■□□□□ 0.25
DDB1-214ENST00000539426 AMOTL2Q9Y2J4 779 aa16.59■□□□□ 0.25
DDB1-214ENST00000539426 AHDC1Q5TGY3 1603 aaPredicted RBP16.59■□□□□ 0.25
DDB1-214ENST00000539426 C19orf44Q9H6X5 657 aa16.58■□□□□ 0.24
DDB1-214ENST00000539426 NAIPQ13075 1403 aa16.58■□□□□ 0.24
DDB1-214ENST00000539426 NEXMIFQ5QGS0 1516 aa16.57■□□□□ 0.24
DDB1-214ENST00000539426 CADPS2Q86UW7 1296 aa16.57■□□□□ 0.24
DDB1-214ENST00000539426 LRP6O75581 1613 aa16.56■□□□□ 0.24
DDB1-214ENST00000539426 METP08581 1390 aa16.56■□□□□ 0.24
DDB1-214ENST00000539426 ZNF326Q5BKZ1 582 aaKnown RBP16.56■□□□□ 0.24
DDB1-214ENST00000539426 KIF1BO60333 1816 aa16.56■□□□□ 0.24
DDB1-214ENST00000539426 ATF3P18847 181 aa16.55■□□□□ 0.24
DDB1-214ENST00000539426 SETD1AO15047 1707 aaKnown RBP16.54■□□□□ 0.24
DDB1-214ENST00000539426 SHPRHQ149N8 1683 aa16.54■□□□□ 0.24
DDB1-214ENST00000539426 DCCP43146 1447 aa16.53■□□□□ 0.24
DDB1-214ENST00000539426 BRINP3Q76B58 766 aa16.53■□□□□ 0.24
DDB1-214ENST00000539426 NALCNQ8IZF0 1738 aa16.51■□□□□ 0.23
DDB1-214ENST00000539426 MST1RQ04912 1400 aa16.51■□□□□ 0.23
DDB1-214ENST00000539426 ASXL1Q8IXJ9 1541 aa16.5■□□□□ 0.23
DDB1-214ENST00000539426 SPATA31A6Q5VVP1 1343 aa16.5■□□□□ 0.23
DDB1-214ENST00000539426 NHSL1Q5SYE7 1610 aa16.5■□□□□ 0.23
DDB1-214ENST00000539426 HFM1A2PYH4 1435 aa16.5■□□□□ 0.23
DDB1-214ENST00000539426 ADGRL3Q9HAR2 1447 aa16.49■□□□□ 0.23
DDB1-214ENST00000539426 TRIM52Q96A61 297 aa16.46■□□□□ 0.23
DDB1-214ENST00000539426 PPLO60437 1756 aa16.46■□□□□ 0.22
DDB1-214ENST00000539426 MEX3CQ5U5Q3 659 aaKnown RBP16.45■□□□□ 0.22
DDB1-214ENST00000539426 SETD5Q9C0A6 1442 aa16.45■□□□□ 0.22
DDB1-214ENST00000539426 PTCH1Q13635 1447 aa16.44■□□□□ 0.22
DDB1-214ENST00000539426 DDX17Q92841 729 aaKnown RBP16.43■□□□□ 0.22
DDB1-214ENST00000539426 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
DDB1-214ENST00000539426 ROBO2Q9HCK4 1378 aa16.41■□□□□ 0.22
DDB1-214ENST00000539426 NUTM2BA6NNL0 878 aaPredicted RBP16.41■□□□□ 0.22
DDB1-214ENST00000539426 NUTM2EB1AL46 878 aaPredicted RBP16.41■□□□□ 0.22
DDB1-214ENST00000539426 NUTM2AQ8IVF1 878 aaPredicted RBP16.41■□□□□ 0.22
DDB1-214ENST00000539426 C1orf167Q5SNV9 1468 aa16.41■□□□□ 0.22
DDB1-214ENST00000539426 PRAG1Q86YV5 1406 aa16.4■□□□□ 0.22
DDB1-214ENST00000539426 VGFO15240 615 aaPredicted RBP16.4■□□□□ 0.22
DDB1-214ENST00000539426 FOXD1Q16676 465 aa16.4■□□□□ 0.22
DDB1-214ENST00000539426 ZNF772Q68DY9 489 aaPredicted RBP16.4■□□□□ 0.22
DDB1-214ENST00000539426 LAMC1P11047 1609 aa16.39■□□□□ 0.21
DDB1-214ENST00000539426 RPGRIP1LQ68CZ1 1315 aa16.39■□□□□ 0.21
DDB1-214ENST00000539426 PNPLA6Q8IY17 1366 aa16.38■□□□□ 0.21
DDB1-214ENST00000539426 LRRC59Q96AG4 307 aaKnown RBP16.37■□□□□ 0.21
DDB1-214ENST00000539426 AFF2P51816 1311 aa16.36■□□□□ 0.21
DDB1-214ENST00000539426 IFT172Q9UG01 1749 aa16.36■□□□□ 0.21
DDB1-214ENST00000539426 ORAI2Q96SN7 254 aa16.34■□□□□ 0.21
DDB1-214ENST00000539426 ADGRF5Q8IZF2 1346 aa16.34■□□□□ 0.21
DDB1-214ENST00000539426 SPATA31E1Q6ZUB1 1445 aa16.34■□□□□ 0.21
DDB1-214ENST00000539426 RXRBP28702 533 aa16.33■□□□□ 0.2
DDB1-214ENST00000539426 CCDC144AA2RUR9 1427 aa16.33■□□□□ 0.2
DDB1-214ENST00000539426 SOS2Q07890 1332 aaPredicted RBP16.32■□□□□ 0.2
DDB1-214ENST00000539426 CDC42BPGQ6DT37 1551 aa16.32■□□□□ 0.2
DDB1-214ENST00000539426 C8orf37Q96NL8 207 aa16.32■□□□□ 0.2
DDB1-214ENST00000539426 CDK12Q9NYV4 1490 aaPredicted RBP16.32■□□□□ 0.2
DDB1-214ENST00000539426 UPF1Q92900 1129 aaKnown RBP eCLIP16.31■□□□□ 0.2
DDB1-214ENST00000539426 RGL3Q3MIN7 710 aa16.3■□□□□ 0.2
DDB1-214ENST00000539426 MPHOSPH9Q99550 1183 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms