RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SMYD5Q6GMV2 418 aa14.54□□□□□ -0.08
CCDC7-209ENST00000539197 GPR37O15354 613 aa14.53□□□□□ -0.08
CCDC7-209ENST00000539197 PRR14Q9BWN1 585 aa14.52□□□□□ -0.09
CCDC7-209ENST00000539197 PPP1R18Q6NYC8 613 aa14.51□□□□□ -0.09
CCDC7-209ENST00000539197 HIC1Q14526 733 aa14.5□□□□□ -0.09
CCDC7-209ENST00000539197 PXYLP1Q8TE99 480 aa14.5□□□□□ -0.09
CCDC7-209ENST00000539197 SLC10A3P09131 477 aa14.47□□□□□ -0.09
CCDC7-209ENST00000539197 BLOC1S3Q6QNY0 202 aa14.47□□□□□ -0.09
CCDC7-209ENST00000539197 METTL3Q86U44 580 aaKnown RBP14.46□□□□□ -0.09
CCDC7-209ENST00000539197 NLRP7Q8WX94 980 aa14.46□□□□□ -0.09
CCDC7-209ENST00000539197 PCDHB3Q9Y5E6 796 aa14.46□□□□□ -0.09
CCDC7-209ENST00000539197 GNPATO15228 680 aa14.45□□□□□ -0.1
CCDC7-209ENST00000539197 OATP04181 439 aa14.45□□□□□ -0.1
CCDC7-209ENST00000539197 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.44□□□□□ -0.1
CCDC7-209ENST00000539197 ZPR1O75312 459 aa14.43□□□□□ -0.1
CCDC7-209ENST00000539197 CFHP08603 1231 aa14.43□□□□□ -0.1
CCDC7-209ENST00000539197 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.42□□□□□ -0.1
CCDC7-209ENST00000539197 TLL1O43897 1013 aa14.41□□□□□ -0.1
CCDC7-209ENST00000539197 KMT5BQ4FZB7 885 aa14.41□□□□□ -0.1
CCDC7-209ENST00000539197 PRKD2Q9BZL6 878 aa14.41□□□□□ -0.1
CCDC7-209ENST00000539197 GGCXP38435 758 aa14.39□□□□□ -0.11
CCDC7-209ENST00000539197 PHOX2BQ99453 314 aa14.39□□□□□ -0.11
CCDC7-209ENST00000539197 ACTN4O43707 911 aaKnown RBP14.38□□□□□ -0.11
CCDC7-209ENST00000539197 GPIHBP1Q8IV16 184 aa14.38□□□□□ -0.11
CCDC7-209ENST00000539197 VSIG10Q8N0Z9 540 aa14.38□□□□□ -0.11
CCDC7-209ENST00000539197 RSPH4AQ5TD94 716 aa14.33□□□□□ -0.12
CCDC7-209ENST00000539197 V9GY48 417 aaPredicted RBP14.33□□□□□ -0.12
CCDC7-209ENST00000539197 PUS10Q3MIT2 529 aaKnown RBP14.32□□□□□ -0.12
CCDC7-209ENST00000539197 TMUB1Q9BVT8 246 aa14.32□□□□□ -0.12
CCDC7-209ENST00000539197 LAPTM4AQ15012 233 aa14.31□□□□□ -0.12
CCDC7-209ENST00000539197 Q6ZNB5 142 aa14.3□□□□□ -0.12
CCDC7-209ENST00000539197 PPEF1O14829 653 aaPredicted RBP14.29□□□□□ -0.12
CCDC7-209ENST00000539197 DAXXQ9UER7 740 aaPredicted RBP14.29□□□□□ -0.12
CCDC7-209ENST00000539197 DDX11L8A8MPP1 907 aa14.28□□□□□ -0.12
CCDC7-209ENST00000539197 RNF223E7ERA6 249 aa14.28□□□□□ -0.12
CCDC7-209ENST00000539197 GFRA3O60609 400 aa14.27□□□□□ -0.13
CCDC7-209ENST00000539197 RDH13Q8NBN7 331 aa14.27□□□□□ -0.13
CCDC7-209ENST00000539197 EMID1Q96A84 441 aaPredicted RBP14.27□□□□□ -0.13
CCDC7-209ENST00000539197 NR1I2O75469 434 aa14.26□□□□□ -0.13
CCDC7-209ENST00000539197 S1PR4O95977 384 aa14.26□□□□□ -0.13
CCDC7-209ENST00000539197 SCUBE3Q8IX30 993 aa14.24□□□□□ -0.13
CCDC7-209ENST00000539197 TULP1O00294 542 aaPredicted RBP14.23□□□□□ -0.13
CCDC7-209ENST00000539197 LCE2BO14633 110 aa14.23□□□□□ -0.13
CCDC7-209ENST00000539197 FUT2Q10981 343 aa14.21□□□□□ -0.13
CCDC7-209ENST00000539197 ADH1BP00325 375 aa14.2□□□□□ -0.14
CCDC7-209ENST00000539197 NRG2O14511 850 aaPredicted RBP14.18□□□□□ -0.14
CCDC7-209ENST00000539197 GCGRP47871 477 aa14.17□□□□□ -0.14
CCDC7-209ENST00000539197 MAP2K5Q13163 448 aa14.17□□□□□ -0.14
CCDC7-209ENST00000539197 MORN1Q5T089 497 aa14.17□□□□□ -0.14
CCDC7-209ENST00000539197 SULF1Q8IWU6 871 aa14.17□□□□□ -0.14
CCDC7-209ENST00000539197 SLC19A1P41440 591 aa14.16□□□□□ -0.14
CCDC7-209ENST00000539197 ANKLE1Q8NAG6 615 aa14.16□□□□□ -0.14
CCDC7-209ENST00000539197 IRF6O14896 467 aa14.15□□□□□ -0.14
CCDC7-209ENST00000539197 PLA2G2CQ5R387 149 aa14.15□□□□□ -0.14
CCDC7-209ENST00000539197 LIAT1Q6ZQX7 453 aa14.15□□□□□ -0.14
CCDC7-209ENST00000539197 SLC6A16Q9GZN6 736 aa14.15□□□□□ -0.14
CCDC7-209ENST00000539197 PDZRN3Q9UPQ7 1066 aa14.15□□□□□ -0.14
CCDC7-209ENST00000539197 SPSB2Q99619 263 aa14.14□□□□□ -0.15
CCDC7-209ENST00000539197 TRIM67Q6ZTA4 783 aa14.13□□□□□ -0.15
CCDC7-209ENST00000539197 SLC27A5Q9Y2P5 690 aa14.13□□□□□ -0.15
CCDC7-209ENST00000539197 ATP6V1AP38606 617 aa14.11□□□□□ -0.15
CCDC7-209ENST00000539197 THAP11Q96EK4 314 aa14.11□□□□□ -0.15
CCDC7-209ENST00000539197 MDM2Q00987 491 aaPredicted RBP14.1□□□□□ -0.15
CCDC7-209ENST00000539197 TRAF7Q6Q0C0 670 aa14.1□□□□□ -0.15
CCDC7-209ENST00000539197 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCDC7-209ENST00000539197 CCDC102AQ96A19 550 aa14.1□□□□□ -0.15
CCDC7-209ENST00000539197 SPRYD7Q5W111 196 aa14.09□□□□□ -0.15
CCDC7-209ENST00000539197 FAM160A2Q8N612 972 aaPredicted RBP14.07□□□□□ -0.16
CCDC7-209ENST00000539197 PRDM9Q9NQV7 894 aa14.07□□□□□ -0.16
CCDC7-209ENST00000539197 MINK1Q8N4C8 1332 aaPredicted RBP14.07□□□□□ -0.16
CCDC7-209ENST00000539197 CD46P15529 392 aa14.06□□□□□ -0.16
CCDC7-209ENST00000539197 RNF19BQ6ZMZ0 732 aa14.05□□□□□ -0.16
CCDC7-209ENST00000539197 ZNF598Q86UK7 904 aaKnown RBP14.05□□□□□ -0.16
CCDC7-209ENST00000539197 HLA-CQ95604 372 aa14.04□□□□□ -0.16
CCDC7-209ENST00000539197 FMNL1O95466 1100 aaPredicted RBP14.03□□□□□ -0.16
CCDC7-209ENST00000539197 ZNF697Q5TEC3 545 aa14.03□□□□□ -0.16
CCDC7-209ENST00000539197 GRIPAP1Q4V328 841 aa14.02□□□□□ -0.17
CCDC7-209ENST00000539197 LMOD2Q6P5Q4 547 aa14.02□□□□□ -0.17
CCDC7-209ENST00000539197 BRICD5Q6PL45 260 aa14.02□□□□□ -0.17
CCDC7-209ENST00000539197 FCF1Q9Y324 198 aaKnown RBP14□□□□□ -0.17
CCDC7-209ENST00000539197 SALL2Q9Y467 1007 aaPredicted RBP14□□□□□ -0.17
CCDC7-209ENST00000539197 TNFRSF10AO00220 468 aa13.99□□□□□ -0.17
CCDC7-209ENST00000539197 REPIN1Q9BWE0 567 aaKnown RBP13.98□□□□□ -0.17
CCDC7-209ENST00000539197 KDM4AO75164 1064 aa13.97□□□□□ -0.17
CCDC7-209ENST00000539197 PRR20EP86478 221 aa13.97□□□□□ -0.17
CCDC7-209ENST00000539197 PRR20CP86479 221 aa13.97□□□□□ -0.17
CCDC7-209ENST00000539197 PRR20DP86480 221 aa13.97□□□□□ -0.17
CCDC7-209ENST00000539197 PRR20BP86481 221 aa13.97□□□□□ -0.17
CCDC7-209ENST00000539197 PRR20AP86496 221 aa13.97□□□□□ -0.17
CCDC7-209ENST00000539197 GDF9O60383 454 aa13.96□□□□□ -0.17
CCDC7-209ENST00000539197 GUCA2AQ02747 115 aa13.95□□□□□ -0.18
CCDC7-209ENST00000539197 GPCPD1Q9NPB8 672 aa13.94□□□□□ -0.18
CCDC7-209ENST00000539197 FAM217BQ9NTX9 383 aaPredicted RBP13.94□□□□□ -0.18
CCDC7-209ENST00000539197 Q3C1V9 767 aa13.93□□□□□ -0.18
CCDC7-209ENST00000539197 PKD2L1Q9P0L9 805 aa13.92□□□□□ -0.18
CCDC7-209ENST00000539197 CLCN1P35523 988 aa13.91□□□□□ -0.18
CCDC7-209ENST00000539197 RPIAP49247 311 aa13.91□□□□□ -0.18
CCDC7-209ENST00000539197 FOXC1Q12948 553 aa13.91□□□□□ -0.18
CCDC7-209ENST00000539197 MSS51Q4VC12 460 aa13.91□□□□□ -0.18
CCDC7-209ENST00000539197 KRI1Q8N9T8 703 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms