RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 BCANQ96GW7 911 aa23.04■■□□□ 1.28
CCDC144NL-202ENST00000539177 MSH6P52701 1360 aa23.02■■□□□ 1.28
CCDC144NL-202ENST00000539177 NOS1P29475 1434 aa23.02■■□□□ 1.28
CCDC144NL-202ENST00000539177 ANKRD30AQ9BXX3 1397 aa23.01■■□□□ 1.27
CCDC144NL-202ENST00000539177 FGD6Q6ZV73 1430 aa23■■□□□ 1.27
CCDC144NL-202ENST00000539177 COL16A1Q07092 1604 aaPredicted RBP22.99■■□□□ 1.27
CCDC144NL-202ENST00000539177 SLAIN2Q9P270 581 aa22.96■■□□□ 1.27
CCDC144NL-202ENST00000539177 JCADQ9P266 1359 aa22.96■■□□□ 1.27
CCDC144NL-202ENST00000539177 TMEM131LA2VDJ0 1609 aa22.93■■□□□ 1.26
CCDC144NL-202ENST00000539177 ZFYVE9O95405 1425 aa22.93■■□□□ 1.26
CCDC144NL-202ENST00000539177 APLP2Q06481 763 aa22.93■■□□□ 1.26
CCDC144NL-202ENST00000539177 PPP1R15AO75807 674 aaPredicted RBP22.92■■□□□ 1.26
CCDC144NL-202ENST00000539177 SLC52A1Q9NWF4 448 aa22.92■■□□□ 1.26
CCDC144NL-202ENST00000539177 LRP6O75581 1613 aa22.92■■□□□ 1.26
CCDC144NL-202ENST00000539177 RIMS2Q9UQ26 1411 aa22.91■■□□□ 1.26
CCDC144NL-202ENST00000539177 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.91■■□□□ 1.26
CCDC144NL-202ENST00000539177 PLEKHG1Q9ULL1 1385 aa22.91■■□□□ 1.26
CCDC144NL-202ENST00000539177 ADGRL2O95490 1459 aa22.9■■□□□ 1.26
CCDC144NL-202ENST00000539177 RPRD2Q5VT52 1461 aaKnown RBP22.9■■□□□ 1.26
CCDC144NL-202ENST00000539177 SHPRHQ149N8 1683 aa22.89■■□□□ 1.25
CCDC144NL-202ENST00000539177 C14orf37Q86TY3 774 aa22.87■■□□□ 1.25
CCDC144NL-202ENST00000539177 MEX3CQ5U5Q3 659 aaKnown RBP22.86■■□□□ 1.25
CCDC144NL-202ENST00000539177 ANKRD50Q9ULJ7 1429 aa22.85■■□□□ 1.25
CCDC144NL-202ENST00000539177 E9PCH4 1651 aa22.85■■□□□ 1.25
CCDC144NL-202ENST00000539177 AHDC1Q5TGY3 1603 aaPredicted RBP22.85■■□□□ 1.25
CCDC144NL-202ENST00000539177 CHGAP10645 457 aaKnown RBP22.84■■□□□ 1.25
CCDC144NL-202ENST00000539177 NUTM2DQ5VT03 806 aaPredicted RBP22.84■■□□□ 1.25
CCDC144NL-202ENST00000539177 TRIM52Q96A61 297 aa22.83■■□□□ 1.25
CCDC144NL-202ENST00000539177 UNC13BO14795 1591 aa22.83■■□□□ 1.25
CCDC144NL-202ENST00000539177 DIP2AQ14689 1571 aa22.82■■□□□ 1.24
CCDC144NL-202ENST00000539177 SPATA31A6Q5VVP1 1343 aa22.82■■□□□ 1.24
CCDC144NL-202ENST00000539177 FAM50AQ14320 339 aaKnown RBP22.81■■□□□ 1.24
CCDC144NL-202ENST00000539177 ADAMTS13Q76LX8 1427 aa22.81■■□□□ 1.24
CCDC144NL-202ENST00000539177 HDGFP51858 240 aaKnown RBP22.8■■□□□ 1.24
CCDC144NL-202ENST00000539177 TBX22Q9Y458 520 aa22.8■■□□□ 1.24
CCDC144NL-202ENST00000539177 NCOA3Q9Y6Q9 1424 aa22.8■■□□□ 1.24
CCDC144NL-202ENST00000539177 ZNF772Q68DY9 489 aaPredicted RBP22.77■■□□□ 1.24
CCDC144NL-202ENST00000539177 UPF1Q92900 1129 aaKnown RBP eCLIP22.77■■□□□ 1.24
CCDC144NL-202ENST00000539177 TRPM2O94759 1503 aa22.77■■□□□ 1.24
CCDC144NL-202ENST00000539177 ATF3P18847 181 aa22.76■■□□□ 1.23
CCDC144NL-202ENST00000539177 CADPS2Q86UW7 1296 aa22.76■■□□□ 1.23
CCDC144NL-202ENST00000539177 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.75■■□□□ 1.23
CCDC144NL-202ENST00000539177 NUTM2BA6NNL0 878 aaPredicted RBP22.74■■□□□ 1.23
CCDC144NL-202ENST00000539177 NUTM2EB1AL46 878 aaPredicted RBP22.74■■□□□ 1.23
CCDC144NL-202ENST00000539177 NUTM2AQ8IVF1 878 aaPredicted RBP22.74■■□□□ 1.23
CCDC144NL-202ENST00000539177 C19orf44Q9H6X5 657 aa22.74■■□□□ 1.23
CCDC144NL-202ENST00000539177 IQGAP3Q86VI3 1631 aa22.74■■□□□ 1.23
CCDC144NL-202ENST00000539177 PIK3R4Q99570 1358 aa22.72■■□□□ 1.23
CCDC144NL-202ENST00000539177 PTPRUQ92729 1446 aa22.72■■□□□ 1.23
CCDC144NL-202ENST00000539177 NHSL1Q5SYE7 1610 aa22.71■■□□□ 1.23
CCDC144NL-202ENST00000539177 BRINP3Q76B58 766 aa22.71■■□□□ 1.23
CCDC144NL-202ENST00000539177 ASXL1Q8IXJ9 1541 aa22.71■■□□□ 1.23
CCDC144NL-202ENST00000539177 NRXN3Q9Y4C0 1643 aa22.71■■□□□ 1.23
CCDC144NL-202ENST00000539177 XRN1Q8IZH2 1706 aaKnown RBP22.71■■□□□ 1.23
CCDC144NL-202ENST00000539177 RXRBP28702 533 aa22.69■■□□□ 1.22
CCDC144NL-202ENST00000539177 AMOTL2Q9Y2J4 779 aa22.69■■□□□ 1.22
CCDC144NL-202ENST00000539177 AFF2P51816 1311 aa22.66■■□□□ 1.22
CCDC144NL-202ENST00000539177 SPHKAPQ2M3C7 1700 aa22.65■■□□□ 1.22
CCDC144NL-202ENST00000539177 CDK12Q9NYV4 1490 aaPredicted RBP22.65■■□□□ 1.22
CCDC144NL-202ENST00000539177 NALCNQ8IZF0 1738 aa22.64■■□□□ 1.21
CCDC144NL-202ENST00000539177 DCCP43146 1447 aa22.64■■□□□ 1.21
CCDC144NL-202ENST00000539177 MST1RQ04912 1400 aa22.64■■□□□ 1.21
CCDC144NL-202ENST00000539177 SETBP1Q9Y6X0 1596 aa22.63■■□□□ 1.21
CCDC144NL-202ENST00000539177 SETD5Q9C0A6 1442 aa22.61■■□□□ 1.21
CCDC144NL-202ENST00000539177 RGS12O14924 1447 aa22.6■■□□□ 1.21
CCDC144NL-202ENST00000539177 DDX17Q92841 729 aaKnown RBP22.59■■□□□ 1.21
CCDC144NL-202ENST00000539177 NUP155O75694 1391 aa22.59■■□□□ 1.21
CCDC144NL-202ENST00000539177 C8orf37Q96NL8 207 aa22.58■■□□□ 1.21
CCDC144NL-202ENST00000539177 ROCK1Q13464 1354 aa22.56■■□□□ 1.2
CCDC144NL-202ENST00000539177 METP08581 1390 aa22.55■■□□□ 1.2
CCDC144NL-202ENST00000539177 PNPLA6Q8IY17 1366 aa22.55■■□□□ 1.2
CCDC144NL-202ENST00000539177 ZNF326Q5BKZ1 582 aaKnown RBP22.55■■□□□ 1.2
CCDC144NL-202ENST00000539177 LRRC59Q96AG4 307 aaKnown RBP22.54■■□□□ 1.2
CCDC144NL-202ENST00000539177 ADGRL3Q9HAR2 1447 aa22.54■■□□□ 1.2
CCDC144NL-202ENST00000539177 ITGAEP38570 1179 aa22.52■■□□□ 1.2
CCDC144NL-202ENST00000539177 QTRT2Q9H974 415 aaKnown RBP22.52■■□□□ 1.2
CCDC144NL-202ENST00000539177 CLTCL1P53675 1640 aa22.52■■□□□ 1.2
CCDC144NL-202ENST00000539177 KIF1BO60333 1816 aa22.52■■□□□ 1.2
CCDC144NL-202ENST00000539177 NEXMIFQ5QGS0 1516 aa22.51■■□□□ 1.19
CCDC144NL-202ENST00000539177 RBM6P78332 1123 aaKnown RBP22.5■■□□□ 1.19
CCDC144NL-202ENST00000539177 ADAMTS2O95450 1211 aa22.49■■□□□ 1.19
CCDC144NL-202ENST00000539177 LAMC1P11047 1609 aa22.47■■□□□ 1.19
CCDC144NL-202ENST00000539177 NGLY1Q96IV0 654 aa22.46■■□□□ 1.19
CCDC144NL-202ENST00000539177 C1orf167Q5SNV9 1468 aa22.46■■□□□ 1.19
CCDC144NL-202ENST00000539177 MARF1Q9Y4F3 1742 aaKnown RBP22.4■■□□□ 1.18
CCDC144NL-202ENST00000539177 ATAD2Q6PL18 1390 aa22.4■■□□□ 1.18
CCDC144NL-202ENST00000539177 COL22A1Q8NFW1 1626 aaPredicted RBP22.39■■□□□ 1.18
CCDC144NL-202ENST00000539177 ORAI2Q96SN7 254 aa22.39■■□□□ 1.17
CCDC144NL-202ENST00000539177 USP21Q9UK80 565 aa22.39■■□□□ 1.17
CCDC144NL-202ENST00000539177 PTCH1Q13635 1447 aa22.38■■□□□ 1.17
CCDC144NL-202ENST00000539177 ROBO2Q9HCK4 1378 aa22.37■■□□□ 1.17
CCDC144NL-202ENST00000539177 SOS2Q07890 1332 aaPredicted RBP22.35■■□□□ 1.17
CCDC144NL-202ENST00000539177 TRPC5Q9UL62 973 aaPredicted RBP22.35■■□□□ 1.17
CCDC144NL-202ENST00000539177 PPLO60437 1756 aa22.35■■□□□ 1.17
CCDC144NL-202ENST00000539177 PPARGC1BQ86YN6 1023 aaKnown RBP22.34■■□□□ 1.17
CCDC144NL-202ENST00000539177 ATRNO75882 1429 aa22.33■■□□□ 1.17
CCDC144NL-202ENST00000539177 FNBP4Q8N3X1 1017 aaPredicted RBP22.29■■□□□ 1.16
CCDC144NL-202ENST00000539177 MYOM2P54296 1465 aa22.28■■□□□ 1.16
CCDC144NL-202ENST00000539177 CDC42BPGQ6DT37 1551 aa22.28■■□□□ 1.16
CCDC144NL-202ENST00000539177 ZRANB1Q9UGI0 708 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms