RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 PRR20EP86478 221 aa6.63□□□□□ -1.35
CBX3P4-201ENST00000538909 PRR20CP86479 221 aa6.63□□□□□ -1.35
CBX3P4-201ENST00000538909 PRR20DP86480 221 aa6.63□□□□□ -1.35
CBX3P4-201ENST00000538909 PRR20BP86481 221 aa6.63□□□□□ -1.35
CBX3P4-201ENST00000538909 PRR20AP86496 221 aa6.63□□□□□ -1.35
CBX3P4-201ENST00000538909 LIAT1Q6ZQX7 453 aa6.63□□□□□ -1.35
CBX3P4-201ENST00000538909 KRTAP4-6Q9BYQ5 205 aa6.63□□□□□ -1.35
CBX3P4-201ENST00000538909 S1PR4O95977 384 aa6.62□□□□□ -1.35
CBX3P4-201ENST00000538909 OSBPP22059 807 aa6.62□□□□□ -1.35
CBX3P4-201ENST00000538909 RBM27Q9P2N5 1060 aaKnown RBP6.62□□□□□ -1.35
CBX3P4-201ENST00000538909 ANKLE1Q8NAG6 615 aa6.61□□□□□ -1.35
CBX3P4-201ENST00000538909 LCE2AQ5TA79 106 aaPredicted RBP6.6□□□□□ -1.35
CBX3P4-201ENST00000538909 PRR14Q9BWN1 585 aa6.6□□□□□ -1.35
CBX3P4-201ENST00000538909 AAASQ9NRG9 546 aa6.6□□□□□ -1.35
CBX3P4-201ENST00000538909 GDF9O60383 454 aa6.59□□□□□ -1.35
CBX3P4-201ENST00000538909 TTC13Q8NBP0 860 aa6.59□□□□□ -1.35
CBX3P4-201ENST00000538909 FOXC1Q12948 553 aa6.58□□□□□ -1.36
CBX3P4-201ENST00000538909 E2F4Q16254 413 aa6.57□□□□□ -1.36
CBX3P4-201ENST00000538909 EYA1Q99502 592 aa6.57□□□□□ -1.36
CBX3P4-201ENST00000538909 NPDC1Q9NQX5 325 aaPredicted RBP6.57□□□□□ -1.36
CBX3P4-201ENST00000538909 DACH1Q9UI36 760 aa6.57□□□□□ -1.36
CBX3P4-201ENST00000538909 WFS1O76024 890 aa6.56□□□□□ -1.36
CBX3P4-201ENST00000538909 PLA2G2CQ5R387 149 aa6.56□□□□□ -1.36
CBX3P4-201ENST00000538909 ADH1BP00325 375 aa6.54□□□□□ -1.36
CBX3P4-201ENST00000538909 KMT5BQ4FZB7 885 aa6.54□□□□□ -1.36
CBX3P4-201ENST00000538909 GMPR2Q9P2T1 348 aaKnown RBP6.54□□□□□ -1.36
CBX3P4-201ENST00000538909 C11orf95C9JLR9 678 aaPredicted RBP6.53□□□□□ -1.36
CBX3P4-201ENST00000538909 CFHP08603 1231 aa6.53□□□□□ -1.36
CBX3P4-201ENST00000538909 SLC6A16Q9GZN6 736 aa6.53□□□□□ -1.36
CBX3P4-201ENST00000538909 PKD2L1Q9P0L9 805 aa6.53□□□□□ -1.36
CBX3P4-201ENST00000538909 ACTN4O43707 911 aaKnown RBP6.52□□□□□ -1.37
CBX3P4-201ENST00000538909 DNAJB2P25686 324 aa6.52□□□□□ -1.37
CBX3P4-201ENST00000538909 STK17AQ9UEE5 414 aa6.52□□□□□ -1.37
CBX3P4-201ENST00000538909 WDR70Q9NW82 654 aa6.51□□□□□ -1.37
CBX3P4-201ENST00000538909 ARIH1Q9Y4X5 557 aaPredicted RBP6.51□□□□□ -1.37
CBX3P4-201ENST00000538909 AXIN1O15169 862 aa6.5□□□□□ -1.37
CBX3P4-201ENST00000538909 NR1I2O75469 434 aa6.5□□□□□ -1.37
CBX3P4-201ENST00000538909 TMEM134Q9H6X4 195 aa6.5□□□□□ -1.37
CBX3P4-201ENST00000538909 NFX1Q12986 1120 aaKnown RBP6.49□□□□□ -1.37
CBX3P4-201ENST00000538909 FAM161AQ3B820 660 aa6.49□□□□□ -1.37
CBX3P4-201ENST00000538909 INSM1Q01101 510 aaPredicted RBP6.48□□□□□ -1.37
CBX3P4-201ENST00000538909 CYP4X1Q8N118 509 aa6.48□□□□□ -1.37
CBX3P4-201ENST00000538909 CRIPAKQ8N1N5 446 aa6.48□□□□□ -1.37
CBX3P4-201ENST00000538909 RBM46Q8TBY0 533 aaKnown RBP6.48□□□□□ -1.37
CBX3P4-201ENST00000538909 RCCD1A6NED2 376 aa6.47□□□□□ -1.37
CBX3P4-201ENST00000538909 PUS10Q3MIT2 529 aaKnown RBP6.47□□□□□ -1.37
CBX3P4-201ENST00000538909 SLC10A3P09131 477 aa6.46□□□□□ -1.38
CBX3P4-201ENST00000538909 LMOD2Q6P5Q4 547 aa6.46□□□□□ -1.38
CBX3P4-201ENST00000538909 SCUBE3Q8IX30 993 aa6.46□□□□□ -1.38
CBX3P4-201ENST00000538909 TOR4AQ9NXH8 423 aa6.46□□□□□ -1.38
CBX3P4-201ENST00000538909 ADGRG1Q9Y653 693 aa6.46□□□□□ -1.38
CBX3P4-201ENST00000538909 WIPF1O43516 503 aa6.45□□□□□ -1.38
CBX3P4-201ENST00000538909 AVPP01185 164 aa6.45□□□□□ -1.38
CBX3P4-201ENST00000538909 BBXQ8WY36 941 aaPredicted RBP6.45□□□□□ -1.38
CBX3P4-201ENST00000538909 SPSB2Q99619 263 aa6.45□□□□□ -1.38
CBX3P4-201ENST00000538909 LCE2CQ5TA81 110 aa6.44□□□□□ -1.38
CBX3P4-201ENST00000538909 FCF1Q9Y324 198 aaKnown RBP6.44□□□□□ -1.38
CBX3P4-201ENST00000538909 TTC24A2A3L6 582 aaPredicted RBP6.43□□□□□ -1.38
CBX3P4-201ENST00000538909 SNRPBP14678 240 aaKnown RBP6.43□□□□□ -1.38
CBX3P4-201ENST00000538909 MLLT3P42568 568 aaPredicted RBP6.43□□□□□ -1.38
CBX3P4-201ENST00000538909 RPIAP49247 311 aa6.43□□□□□ -1.38
CBX3P4-201ENST00000538909 CTC1Q2NKJ3 1217 aa6.43□□□□□ -1.38
CBX3P4-201ENST00000538909 CD2BP2O95400 341 aaKnown RBP6.42□□□□□ -1.38
CBX3P4-201ENST00000538909 PTGDRQ13258 359 aa6.42□□□□□ -1.38
CBX3P4-201ENST00000538909 SPRYD3Q8NCJ5 442 aa6.42□□□□□ -1.38
CBX3P4-201ENST00000538909 SMCPP49901 116 aaPredicted RBP6.41□□□□□ -1.38
CBX3P4-201ENST00000538909 NUTM2FA1L443 756 aa6.4□□□□□ -1.38
CBX3P4-201ENST00000538909 TERTO14746 1132 aaKnown RBP6.4□□□□□ -1.38
CBX3P4-201ENST00000538909 ATP13A2Q9NQ11 1180 aa6.4□□□□□ -1.38
CBX3P4-201ENST00000538909 PRDM9Q9NQV7 894 aa6.39□□□□□ -1.39
CBX3P4-201ENST00000538909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.38□□□□□ -1.39
CBX3P4-201ENST00000538909 SMPD1P17405 629 aa6.37□□□□□ -1.39
CBX3P4-201ENST00000538909 CFAP44Q96MT7 982 aa6.37□□□□□ -1.39
CBX3P4-201ENST00000538909 ZBTB24O43167 697 aaPredicted RBP6.36□□□□□ -1.39
CBX3P4-201ENST00000538909 RSPH4AQ5TD94 716 aa6.36□□□□□ -1.39
CBX3P4-201ENST00000538909 FAM160A2Q8N612 972 aaPredicted RBP6.36□□□□□ -1.39
CBX3P4-201ENST00000538909 TRIM47Q96LD4 638 aa6.36□□□□□ -1.39
CBX3P4-201ENST00000538909 J3QL48 77 aa6.35□□□□□ -1.39
CBX3P4-201ENST00000538909 MORN1Q5T089 497 aa6.35□□□□□ -1.39
CBX3P4-201ENST00000538909 RDH13Q8NBN7 331 aa6.35□□□□□ -1.39
CBX3P4-201ENST00000538909 SENP2Q9HC62 589 aa6.35□□□□□ -1.39
CBX3P4-201ENST00000538909 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.35□□□□□ -1.39
CBX3P4-201ENST00000538909 FMNL1O95466 1100 aaPredicted RBP6.34□□□□□ -1.39
CBX3P4-201ENST00000538909 FUT2Q10981 343 aa6.34□□□□□ -1.39
CBX3P4-201ENST00000538909 PAXIP1Q6ZW49 1069 aaPredicted RBP6.34□□□□□ -1.39
CBX3P4-201ENST00000538909 SNIP1Q8TAD8 396 aaKnown RBP6.34□□□□□ -1.39
CBX3P4-201ENST00000538909 PXYLP1Q8TE99 480 aa6.34□□□□□ -1.39
CBX3P4-201ENST00000538909 THAP11Q96EK4 314 aa6.34□□□□□ -1.39
CBX3P4-201ENST00000538909 FAM181BA6NEQ2 426 aa6.33□□□□□ -1.4
CBX3P4-201ENST00000538909 WNT7AO00755 349 aa6.33□□□□□ -1.4
CBX3P4-201ENST00000538909 HPS1Q92902 700 aa6.33□□□□□ -1.4
CBX3P4-201ENST00000538909 SLC27A5Q9Y2P5 690 aa6.33□□□□□ -1.4
CBX3P4-201ENST00000538909 FCHSD2O94868 740 aa6.32□□□□□ -1.4
CBX3P4-201ENST00000538909 MRGPRX2Q96LB1 330 aa6.32□□□□□ -1.4
CBX3P4-201ENST00000538909 DDX11L8A8MPP1 907 aa6.31□□□□□ -1.4
CBX3P4-201ENST00000538909 OATP04181 439 aa6.31□□□□□ -1.4
CBX3P4-201ENST00000538909 FECHP22830 423 aa6.31□□□□□ -1.4
CBX3P4-201ENST00000538909 GMPRP36959 345 aa6.31□□□□□ -1.4
CBX3P4-201ENST00000538909 ATP6V1AP38606 617 aa6.31□□□□□ -1.4
CBX3P4-201ENST00000538909 SLC16A10Q8TF71 515 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms