RNA–Protein interactions for RNA: ENST00000538903.1

RAB35-203, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 3

Gene RAB35, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-203ENST00000538903 ZFYVE9O95405 1425 aa22.24■■□□□ 1.15
RAB35-203ENST00000538903 BCANQ96GW7 911 aa22.24■■□□□ 1.15
RAB35-203ENST00000538903 NWD1Q149M9 1564 aa22.24■■□□□ 1.15
RAB35-203ENST00000538903 GCC2Q8IWJ2 1684 aa22.23■■□□□ 1.15
RAB35-203ENST00000538903 TMEM131LA2VDJ0 1609 aa22.22■■□□□ 1.15
RAB35-203ENST00000538903 RGS17Q9UGC6 210 aaPredicted RBP22.22■■□□□ 1.15
RAB35-203ENST00000538903 NKTRP30414 1462 aaKnown RBP22.22■■□□□ 1.15
RAB35-203ENST00000538903 ROBO1Q9Y6N7 1651 aa22.21■■□□□ 1.15
RAB35-203ENST00000538903 RIMS2Q9UQ26 1411 aa22.21■■□□□ 1.15
RAB35-203ENST00000538903 UNC13BO14795 1591 aa22.21■■□□□ 1.15
RAB35-203ENST00000538903 PLEKHG1Q9ULL1 1385 aa22.19■■□□□ 1.14
RAB35-203ENST00000538903 CHD2O14647 1828 aaKnown RBP22.17■■□□□ 1.14
RAB35-203ENST00000538903 E9PCH4 1651 aa22.17■■□□□ 1.14
RAB35-203ENST00000538903 PPP1R15AO75807 674 aaPredicted RBP22.17■■□□□ 1.14
RAB35-203ENST00000538903 MSH6P52701 1360 aa22.15■■□□□ 1.14
RAB35-203ENST00000538903 CHGAP10645 457 aaKnown RBP22.15■■□□□ 1.14
RAB35-203ENST00000538903 ROCK1Q13464 1354 aa22.14■■□□□ 1.14
RAB35-203ENST00000538903 NUTM2DQ5VT03 806 aaPredicted RBP22.14■■□□□ 1.13
RAB35-203ENST00000538903 HDGFP51858 240 aaKnown RBP22.13■■□□□ 1.13
RAB35-203ENST00000538903 IQGAP3Q86VI3 1631 aa22.13■■□□□ 1.13
RAB35-203ENST00000538903 SLAIN2Q9P270 581 aa22.12■■□□□ 1.13
RAB35-203ENST00000538903 TBX22Q9Y458 520 aa22.12■■□□□ 1.13
RAB35-203ENST00000538903 ITGAEP38570 1179 aa22.1■■□□□ 1.13
RAB35-203ENST00000538903 ADAMTS13Q76LX8 1427 aa22.1■■□□□ 1.13
RAB35-203ENST00000538903 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.09■■□□□ 1.13
RAB35-203ENST00000538903 NUP155O75694 1391 aa22.09■■□□□ 1.13
RAB35-203ENST00000538903 POTEAQ6S8J7 498 aa22.08■■□□□ 1.13
RAB35-203ENST00000538903 PPARGC1BQ86YN6 1023 aaKnown RBP22.08■■□□□ 1.13
RAB35-203ENST00000538903 PHLPP1O60346 1717 aa22.08■■□□□ 1.12
RAB35-203ENST00000538903 DIP2AQ14689 1571 aa22.04■■□□□ 1.12
RAB35-203ENST00000538903 C14orf37Q86TY3 774 aa22.03■■□□□ 1.12
RAB35-203ENST00000538903 NCOA3Q9Y6Q9 1424 aa22.03■■□□□ 1.12
RAB35-203ENST00000538903 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.01■■□□□ 1.11
RAB35-203ENST00000538903 RRBP1Q9P2E9 1410 aaKnown RBP22.01■■□□□ 1.11
RAB35-203ENST00000538903 COL16A1Q07092 1604 aaPredicted RBP22.01■■□□□ 1.11
RAB35-203ENST00000538903 PIK3R4Q99570 1358 aa22■■□□□ 1.11
RAB35-203ENST00000538903 JCADQ9P266 1359 aa22■■□□□ 1.11
RAB35-203ENST00000538903 PTPRUQ92729 1446 aa22■■□□□ 1.11
RAB35-203ENST00000538903 TRPM2O94759 1503 aa21.98■■□□□ 1.11
RAB35-203ENST00000538903 C19orf44Q9H6X5 657 aa21.98■■□□□ 1.11
RAB35-203ENST00000538903 AMOTL2Q9Y2J4 779 aa21.98■■□□□ 1.11
RAB35-203ENST00000538903 CADPS2Q86UW7 1296 aa21.97■■□□□ 1.11
RAB35-203ENST00000538903 SPHKAPQ2M3C7 1700 aa21.97■■□□□ 1.11
RAB35-203ENST00000538903 NRXN3Q9Y4C0 1643 aa21.96■■□□□ 1.11
RAB35-203ENST00000538903 ATF3P18847 181 aa21.96■■□□□ 1.11
RAB35-203ENST00000538903 LRP6O75581 1613 aa21.93■■□□□ 1.1
RAB35-203ENST00000538903 AHDC1Q5TGY3 1603 aaPredicted RBP21.93■■□□□ 1.1
RAB35-203ENST00000538903 SETBP1Q9Y6X0 1596 aa21.92■■□□□ 1.1
RAB35-203ENST00000538903 XRN1Q8IZH2 1706 aaKnown RBP21.92■■□□□ 1.1
RAB35-203ENST00000538903 ZNF326Q5BKZ1 582 aaKnown RBP21.91■■□□□ 1.1
RAB35-203ENST00000538903 SETD1AO15047 1707 aaKnown RBP21.9■■□□□ 1.1
RAB35-203ENST00000538903 BRINP3Q76B58 766 aa21.9■■□□□ 1.1
RAB35-203ENST00000538903 METP08581 1390 aa21.89■■□□□ 1.1
RAB35-203ENST00000538903 CLTCL1P53675 1640 aa21.88■■□□□ 1.09
RAB35-203ENST00000538903 SPATA31A6Q5VVP1 1343 aa21.88■■□□□ 1.09
RAB35-203ENST00000538903 SHPRHQ149N8 1683 aa21.87■■□□□ 1.09
RAB35-203ENST00000538903 NAIPQ13075 1403 aa21.87■■□□□ 1.09
RAB35-203ENST00000538903 DCCP43146 1447 aa21.86■■□□□ 1.09
RAB35-203ENST00000538903 NEXMIFQ5QGS0 1516 aa21.85■■□□□ 1.09
RAB35-203ENST00000538903 MEX3CQ5U5Q3 659 aaKnown RBP21.85■■□□□ 1.09
RAB35-203ENST00000538903 ASXL1Q8IXJ9 1541 aa21.84■■□□□ 1.09
RAB35-203ENST00000538903 MST1RQ04912 1400 aa21.83■■□□□ 1.09
RAB35-203ENST00000538903 KIF1BO60333 1816 aa21.8■■□□□ 1.08
RAB35-203ENST00000538903 NUTM2BA6NNL0 878 aaPredicted RBP21.8■■□□□ 1.08
RAB35-203ENST00000538903 NUTM2EB1AL46 878 aaPredicted RBP21.8■■□□□ 1.08
RAB35-203ENST00000538903 NUTM2AQ8IVF1 878 aaPredicted RBP21.8■■□□□ 1.08
RAB35-203ENST00000538903 NHSL1Q5SYE7 1610 aa21.79■■□□□ 1.08
RAB35-203ENST00000538903 ADGRL3Q9HAR2 1447 aa21.79■■□□□ 1.08
RAB35-203ENST00000538903 NALCNQ8IZF0 1738 aa21.78■■□□□ 1.08
RAB35-203ENST00000538903 ZNF772Q68DY9 489 aaPredicted RBP21.78■■□□□ 1.08
RAB35-203ENST00000538903 DDX17Q92841 729 aaKnown RBP21.78■■□□□ 1.08
RAB35-203ENST00000538903 HFM1A2PYH4 1435 aa21.77■■□□□ 1.08
RAB35-203ENST00000538903 SETD5Q9C0A6 1442 aa21.77■■□□□ 1.08
RAB35-203ENST00000538903 TRIM52Q96A61 297 aa21.76■■□□□ 1.07
RAB35-203ENST00000538903 ROBO2Q9HCK4 1378 aa21.72■■□□□ 1.07
RAB35-203ENST00000538903 LRRC59Q96AG4 307 aaKnown RBP21.71■■□□□ 1.07
RAB35-203ENST00000538903 AFF2P51816 1311 aa21.71■■□□□ 1.07
RAB35-203ENST00000538903 VGFO15240 615 aaPredicted RBP21.7■■□□□ 1.06
RAB35-203ENST00000538903 RXRBP28702 533 aa21.7■■□□□ 1.06
RAB35-203ENST00000538903 PTCH1Q13635 1447 aa21.7■■□□□ 1.06
RAB35-203ENST00000538903 C1orf167Q5SNV9 1468 aa21.7■■□□□ 1.06
RAB35-203ENST00000538903 SLC4A1APQ9BWU0 796 aaKnown RBP21.69■■□□□ 1.06
RAB35-203ENST00000538903 PNPLA6Q8IY17 1366 aa21.69■■□□□ 1.06
RAB35-203ENST00000538903 UPF1Q92900 1129 aaKnown RBP eCLIP21.68■■□□□ 1.063e-8■■■□□ 19.2
RAB35-203ENST00000538903 PPLO60437 1756 aa21.66■■□□□ 1.06
RAB35-203ENST00000538903 RPGRIP1LQ68CZ1 1315 aa21.66■■□□□ 1.06
RAB35-203ENST00000538903 FOXD1Q16676 465 aa21.66■■□□□ 1.06
RAB35-203ENST00000538903 C8orf37Q96NL8 207 aa21.66■■□□□ 1.06
RAB35-203ENST00000538903 ORAI2Q96SN7 254 aa21.66■■□□□ 1.06
RAB35-203ENST00000538903 PRAG1Q86YV5 1406 aa21.64■■□□□ 1.06
RAB35-203ENST00000538903 LAMC1P11047 1609 aa21.63■■□□□ 1.05
RAB35-203ENST00000538903 CDK12Q9NYV4 1490 aaPredicted RBP21.63■■□□□ 1.05
RAB35-203ENST00000538903 ADAMTS2O95450 1211 aa21.61■■□□□ 1.05
RAB35-203ENST00000538903 SOS2Q07890 1332 aaPredicted RBP21.6■■□□□ 1.05
RAB35-203ENST00000538903 QTRT2Q9H974 415 aaKnown RBP21.6■■□□□ 1.05
RAB35-203ENST00000538903 ADGRF5Q8IZF2 1346 aa21.58■■□□□ 1.05
RAB35-203ENST00000538903 IFT172Q9UG01 1749 aa21.58■■□□□ 1.05
RAB35-203ENST00000538903 RGS12O14924 1447 aa21.57■■□□□ 1.04
RAB35-203ENST00000538903 NGLY1Q96IV0 654 aa21.57■■□□□ 1.04
RAB35-203ENST00000538903 RBM6P78332 1123 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms