RNA–Protein interactions for RNA: ENST00000537347.1

ACACB-208, Transcript of acetyl-CoA carboxylase beta, human

TSL 3

Gene ACACB, Length 1,254 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACB-208	ENST00000537347	NOS1	P29475	1434 aa		14.03	□□□□□ -0.16
ACACB-208	ENST00000537347	TET3	O43151	1660 aa		14.02	□□□□□ -0.16
ACACB-208	ENST00000537347	NKTR	P30414	1462 aa	Known RBP	14.02	□□□□□ -0.16
ACACB-208	ENST00000537347	ADGRB3	O60242	1522 aa		14.01	□□□□□ -0.17
ACACB-208	ENST00000537347	RPRD2	Q5VT52	1461 aa	Known RBP	14.01	□□□□□ -0.17
ACACB-208	ENST00000537347	PPP1R15A	O75807	674 aa	Predicted RBP	14	□□□□□ -0.17
ACACB-208	ENST00000537347	SLAIN2	Q9P270	581 aa		14	□□□□□ -0.17
ACACB-208	ENST00000537347	ROBO1	Q9Y6N7	1651 aa		13.99	□□□□□ -0.17
ACACB-208	ENST00000537347	RBM33	Q96EV2	1170 aa	Known RBP	13.99	□□□□□ -0.17
ACACB-208	ENST00000537347	ADGRL2	O95490	1459 aa		13.99	□□□□□ -0.17
ACACB-208	ENST00000537347	FAM50A	Q14320	339 aa	Known RBP	13.98	□□□□□ -0.17
ACACB-208	ENST00000537347	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
ACACB-208	ENST00000537347	ANKRD50	Q9ULJ7	1429 aa		13.98	□□□□□ -0.17
ACACB-208	ENST00000537347	PLEKHG1	Q9ULL1	1385 aa		13.97	□□□□□ -0.17
ACACB-208	ENST00000537347	NWD1	Q149M9	1564 aa		13.97	□□□□□ -0.17
ACACB-208	ENST00000537347	POTEA	Q6S8J7	498 aa		13.96	□□□□□ -0.17
ACACB-208	ENST00000537347	TBX22	Q9Y458	520 aa		13.96	□□□□□ -0.17
ACACB-208	ENST00000537347	NCOA3	Q9Y6Q9	1424 aa		13.96	□□□□□ -0.18
ACACB-208	ENST00000537347	JCAD	Q9P266	1359 aa		13.96	□□□□□ -0.18
ACACB-208	ENST00000537347	C14orf37	Q86TY3	774 aa		13.95	□□□□□ -0.18
ACACB-208	ENST00000537347	RIMS2	Q9UQ26	1411 aa		13.95	□□□□□ -0.18
ACACB-208	ENST00000537347	ZFYVE9	O95405	1425 aa		13.94	□□□□□ -0.18
ACACB-208	ENST00000537347	CHGA	P10645	457 aa	Known RBP	13.93	□□□□□ -0.18
ACACB-208	ENST00000537347	CADPS2	Q86UW7	1296 aa		13.93	□□□□□ -0.18
ACACB-208	ENST00000537347	C19orf44	Q9H6X5	657 aa		13.92	□□□□□ -0.18
ACACB-208	ENST00000537347	PHLPP1	O60346	1717 aa		13.92	□□□□□ -0.18
ACACB-208	ENST00000537347	SPATA31A6	Q5VVP1	1343 aa		13.91	□□□□□ -0.18
ACACB-208	ENST00000537347	ATF3	P18847	181 aa		13.91	□□□□□ -0.18
ACACB-208	ENST00000537347	CHD2	O14647	1828 aa	Known RBP	13.91	□□□□□ -0.18
ACACB-208	ENST00000537347	PIK3R4	Q99570	1358 aa		13.91	□□□□□ -0.18
ACACB-208	ENST00000537347	TMEM131L	A2VDJ0	1609 aa		13.9	□□□□□ -0.18
ACACB-208	ENST00000537347	GCC2	Q8IWJ2	1684 aa		13.89	□□□□□ -0.19
ACACB-208	ENST00000537347	MEX3C	Q5U5Q3	659 aa	Known RBP	13.89	□□□□□ -0.19
ACACB-208	ENST00000537347	ZNF772	Q68DY9	489 aa	Predicted RBP	13.89	□□□□□ -0.19
ACACB-208	ENST00000537347	DIP2A	Q14689	1571 aa		13.88	□□□□□ -0.19
ACACB-208	ENST00000537347	MYO5B	Q9ULV0	1848 aa		13.87	□□□□□ -0.19
ACACB-208	ENST00000537347	ROCK1	Q13464	1354 aa		13.86	□□□□□ -0.19
ACACB-208	ENST00000537347	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.86	□□□□□ -0.19
ACACB-208	ENST00000537347	UNC13B	O14795	1591 aa		13.86	□□□□□ -0.19
ACACB-208	ENST00000537347	ADAMTS13	Q76LX8	1427 aa		13.85	□□□□□ -0.19
ACACB-208	ENST00000537347	AMOTL2	Q9Y2J4	779 aa		13.85	□□□□□ -0.19
ACACB-208	ENST00000537347	COL16A1	Q07092	1604 aa	Predicted RBP	13.85	□□□□□ -0.19
ACACB-208	ENST00000537347	TRPM2	O94759	1503 aa		13.84	□□□□□ -0.19
ACACB-208	ENST00000537347	NUP155	O75694	1391 aa		13.83	□□□□□ -0.19
ACACB-208	ENST00000537347	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.82	□□□□□ -0.2
ACACB-208	ENST00000537347		E9PCH4	1651 aa		13.82	□□□□□ -0.2
ACACB-208	ENST00000537347	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.82	□□□□□ -0.2
ACACB-208	ENST00000537347	IQGAP3	Q86VI3	1631 aa		13.82	□□□□□ -0.2
ACACB-208	ENST00000537347	DCC	P43146	1447 aa		13.81	□□□□□ -0.2
ACACB-208	ENST00000537347	BRINP3	Q76B58	766 aa		13.81	□□□□□ -0.2
ACACB-208	ENST00000537347	RXRB	P28702	533 aa		13.8	□□□□□ -0.2
ACACB-208	ENST00000537347	LRP6	O75581	1613 aa		13.79	□□□□□ -0.2
ACACB-208	ENST00000537347	SHPRH	Q149N8	1683 aa		13.79	□□□□□ -0.2
ACACB-208	ENST00000537347	ZNF326	Q5BKZ1	582 aa	Known RBP	13.79	□□□□□ -0.2
ACACB-208	ENST00000537347	TRIM52	Q96A61	297 aa		13.79	□□□□□ -0.2
ACACB-208	ENST00000537347	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.78	□□□□□ -0.2
ACACB-208	ENST00000537347	NUTM2E	B1AL46	878 aa	Predicted RBP	13.78	□□□□□ -0.2
ACACB-208	ENST00000537347	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.78	□□□□□ -0.2
ACACB-208	ENST00000537347	LRRC59	Q96AG4	307 aa	Known RBP	13.78	□□□□□ -0.2
ACACB-208	ENST00000537347	SETD1A	O15047	1707 aa	Known RBP	13.77	□□□□□ -0.21
ACACB-208	ENST00000537347	ITGAE	P38570	1179 aa		13.77	□□□□□ -0.21
ACACB-208	ENST00000537347	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
ACACB-208	ENST00000537347	PTPRU	Q92729	1446 aa		13.76	□□□□□ -0.21
ACACB-208	ENST00000537347	SETD5	Q9C0A6	1442 aa		13.75	□□□□□ -0.21
ACACB-208	ENST00000537347	SETBP1	Q9Y6X0	1596 aa		13.75	□□□□□ -0.21
ACACB-208	ENST00000537347	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.74	□□□□□ -0.21
ACACB-208	ENST00000537347	ASXL1	Q8IXJ9	1541 aa		13.74	□□□□□ -0.21
ACACB-208	ENST00000537347	AFF2	P51816	1311 aa		13.73	□□□□□ -0.21
ACACB-208	ENST00000537347	XRN1	Q8IZH2	1706 aa	Known RBP	13.73	□□□□□ -0.21
ACACB-208	ENST00000537347	MST1R	Q04912	1400 aa		13.73	□□□□□ -0.21
ACACB-208	ENST00000537347	MET	P08581	1390 aa		13.72	□□□□□ -0.21
ACACB-208	ENST00000537347	SPHKAP	Q2M3C7	1700 aa		13.71	□□□□□ -0.21
ACACB-208	ENST00000537347	C8orf37	Q96NL8	207 aa		13.71	□□□□□ -0.21
ACACB-208	ENST00000537347	ADGRL3	Q9HAR2	1447 aa		13.71	□□□□□ -0.22
ACACB-208	ENST00000537347	VGF	O15240	615 aa	Predicted RBP	13.7	□□□□□ -0.22
ACACB-208	ENST00000537347	RBM6	P78332	1123 aa	Known RBP	13.7	□□□□□ -0.22
ACACB-208	ENST00000537347	QTRT2	Q9H974	415 aa	Known RBP	13.7	□□□□□ -0.22
ACACB-208	ENST00000537347	NRXN3	Q9Y4C0	1643 aa		13.7	□□□□□ -0.22
ACACB-208	ENST00000537347	NHSL1	Q5SYE7	1610 aa		13.69	□□□□□ -0.22
ACACB-208	ENST00000537347	NGLY1	Q96IV0	654 aa		13.69	□□□□□ -0.22
ACACB-208	ENST00000537347	PNPLA6	Q8IY17	1366 aa		13.68	□□□□□ -0.22
ACACB-208	ENST00000537347	RPGRIP1L	Q68CZ1	1315 aa		13.65	□□□□□ -0.22
ACACB-208	ENST00000537347	NEXMIF	Q5QGS0	1516 aa		13.65	□□□□□ -0.22
ACACB-208	ENST00000537347	DDX17	Q92841	729 aa	Known RBP	13.65	□□□□□ -0.22
ACACB-208	ENST00000537347	C1orf167	Q5SNV9	1468 aa		13.65	□□□□□ -0.22
ACACB-208	ENST00000537347	PTCH1	Q13635	1447 aa		13.64	□□□□□ -0.23
ACACB-208	ENST00000537347	ADAMTS2	O95450	1211 aa		13.64	□□□□□ -0.23
ACACB-208	ENST00000537347	KIF1B	O60333	1816 aa		13.64	□□□□□ -0.23
ACACB-208	ENST00000537347	CLTCL1	P53675	1640 aa		13.64	□□□□□ -0.23
ACACB-208	ENST00000537347	SOS2	Q07890	1332 aa	Predicted RBP	13.64	□□□□□ -0.23
ACACB-208	ENST00000537347	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.63	□□□□□ -0.23
ACACB-208	ENST00000537347	NALCN	Q8IZF0	1738 aa		13.62	□□□□□ -0.23
ACACB-208	ENST00000537347	USP21	Q9UK80	565 aa		13.62	□□□□□ -0.23
ACACB-208	ENST00000537347	TRPC5	Q9UL62	973 aa	Predicted RBP	13.62	□□□□□ -0.23
ACACB-208	ENST00000537347	RGS12	O14924	1447 aa		13.62	□□□□□ -0.23
ACACB-208	ENST00000537347	ORAI2	Q96SN7	254 aa		13.61	□□□□□ -0.23
ACACB-208	ENST00000537347	HFM1	A2PYH4	1435 aa		13.61	□□□□□ -0.23
ACACB-208	ENST00000537347	ATAD2	Q6PL18	1390 aa		13.6	□□□□□ -0.23
ACACB-208	ENST00000537347	ROBO2	Q9HCK4	1378 aa		13.6	□□□□□ -0.23
ACACB-208	ENST00000537347	LAMC1	P11047	1609 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms