RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 COPS2P61201 443 aa12.87□□□□□ -0.35
VBP1-203ENST00000535916 GPR37O15354 613 aa12.86□□□□□ -0.35
VBP1-203ENST00000535916 FECHP22830 423 aa12.85□□□□□ -0.35
VBP1-203ENST00000535916 PXYLP1Q8TE99 480 aa12.85□□□□□ -0.35
VBP1-203ENST00000535916 NKX2-3Q8TAU0 364 aa12.84□□□□□ -0.35
VBP1-203ENST00000535916 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.83□□□□□ -0.36
VBP1-203ENST00000535916 GNPATO15228 680 aa12.83□□□□□ -0.36
VBP1-203ENST00000535916 OATP04181 439 aa12.82□□□□□ -0.36
VBP1-203ENST00000535916 PRR14Q9BWN1 585 aa12.82□□□□□ -0.36
VBP1-203ENST00000535916 PCDHB3Q9Y5E6 796 aa12.82□□□□□ -0.36
VBP1-203ENST00000535916 PPP1R18Q6NYC8 613 aa12.81□□□□□ -0.36
VBP1-203ENST00000535916 METTL3Q86U44 580 aaKnown RBP12.81□□□□□ -0.36
VBP1-203ENST00000535916 VSIG10Q8N0Z9 540 aa12.81□□□□□ -0.36
VBP1-203ENST00000535916 CFHP08603 1231 aa12.79□□□□□ -0.36
VBP1-203ENST00000535916 SLC10A3P09131 477 aa12.79□□□□□ -0.36
VBP1-203ENST00000535916 BLOC1S3Q6QNY0 202 aa12.79□□□□□ -0.36
VBP1-203ENST00000535916 ZPR1O75312 459 aa12.78□□□□□ -0.36
VBP1-203ENST00000535916 KMT5BQ4FZB7 885 aa12.77□□□□□ -0.37
VBP1-203ENST00000535916 GPIHBP1Q8IV16 184 aa12.77□□□□□ -0.37
VBP1-203ENST00000535916 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.77□□□□□ -0.37
VBP1-203ENST00000535916 ACTN4O43707 911 aaKnown RBP12.75□□□□□ -0.37
VBP1-203ENST00000535916 LAPTM4AQ15012 233 aa12.74□□□□□ -0.37
VBP1-203ENST00000535916 NLRP7Q8WX94 980 aa12.73□□□□□ -0.37
VBP1-203ENST00000535916 PRKD2Q9BZL6 878 aa12.73□□□□□ -0.37
VBP1-203ENST00000535916 TLL1O43897 1013 aa12.72□□□□□ -0.37
VBP1-203ENST00000535916 TRAF7Q6Q0C0 670 aa12.7□□□□□ -0.38
VBP1-203ENST00000535916 GGCXP38435 758 aa12.69□□□□□ -0.38
VBP1-203ENST00000535916 PHOX2BQ99453 314 aa12.69□□□□□ -0.38
VBP1-203ENST00000535916 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
VBP1-203ENST00000535916 RSPH4AQ5TD94 716 aa12.65□□□□□ -0.38
VBP1-203ENST00000535916 TMUB1Q9BVT8 246 aa12.65□□□□□ -0.38
VBP1-203ENST00000535916 V9GY48 417 aaPredicted RBP12.65□□□□□ -0.38
VBP1-203ENST00000535916 DDX11L8A8MPP1 907 aa12.64□□□□□ -0.39
VBP1-203ENST00000535916 LCE2BO14633 110 aa12.64□□□□□ -0.39
VBP1-203ENST00000535916 PUS10Q3MIT2 529 aaKnown RBP12.64□□□□□ -0.39
VBP1-203ENST00000535916 RDH13Q8NBN7 331 aa12.64□□□□□ -0.39
VBP1-203ENST00000535916 RNF223E7ERA6 249 aa12.63□□□□□ -0.39
VBP1-203ENST00000535916 NR1I2O75469 434 aa12.63□□□□□ -0.39
VBP1-203ENST00000535916 TULP1O00294 542 aaPredicted RBP12.62□□□□□ -0.39
VBP1-203ENST00000535916 S1PR4O95977 384 aa12.6□□□□□ -0.39
VBP1-203ENST00000535916 ADH1BP00325 375 aa12.6□□□□□ -0.39
VBP1-203ENST00000535916 GFRA3O60609 400 aa12.59□□□□□ -0.39
VBP1-203ENST00000535916 MAP2K5Q13163 448 aa12.59□□□□□ -0.39
VBP1-203ENST00000535916 SCUBE3Q8IX30 993 aa12.59□□□□□ -0.39
VBP1-203ENST00000535916 PPEF1O14829 653 aaPredicted RBP12.58□□□□□ -0.4
VBP1-203ENST00000535916 FUT2Q10981 343 aa12.57□□□□□ -0.4
VBP1-203ENST00000535916 SULF1Q8IWU6 871 aa12.57□□□□□ -0.4
VBP1-203ENST00000535916 EMID1Q96A84 441 aaPredicted RBP12.57□□□□□ -0.4
VBP1-203ENST00000535916 GCGRP47871 477 aa12.55□□□□□ -0.4
VBP1-203ENST00000535916 MORN1Q5T089 497 aa12.55□□□□□ -0.4
VBP1-203ENST00000535916 IRF6O14896 467 aa12.54□□□□□ -0.4
VBP1-203ENST00000535916 ANKLE1Q8NAG6 615 aa12.54□□□□□ -0.4
VBP1-203ENST00000535916 SLC6A16Q9GZN6 736 aa12.54□□□□□ -0.4
VBP1-203ENST00000535916 NRG2O14511 850 aaPredicted RBP12.52□□□□□ -0.41
VBP1-203ENST00000535916 ATP6V1AP38606 617 aa12.52□□□□□ -0.41
VBP1-203ENST00000535916 SLC19A1P41440 591 aa12.52□□□□□ -0.41
VBP1-203ENST00000535916 SPSB2Q99619 263 aa12.52□□□□□ -0.41
VBP1-203ENST00000535916 ZNF787Q6DD87 383 aa12.5□□□□□ -0.41
VBP1-203ENST00000535916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
VBP1-203ENST00000535916 CCDC102AQ96A19 550 aa12.5□□□□□ -0.41
VBP1-203ENST00000535916 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
VBP1-203ENST00000535916 SLC27A5Q9Y2P5 690 aa12.5□□□□□ -0.41
VBP1-203ENST00000535916 MINK1Q8N4C8 1332 aaPredicted RBP12.5□□□□□ -0.41
VBP1-203ENST00000535916 LIAT1Q6ZQX7 453 aa12.49□□□□□ -0.41
VBP1-203ENST00000535916 MDM2Q00987 491 aaPredicted RBP12.48□□□□□ -0.41
VBP1-203ENST00000535916 THAP11Q96EK4 314 aa12.48□□□□□ -0.41
VBP1-203ENST00000535916 CD46P15529 392 aa12.47□□□□□ -0.41
VBP1-203ENST00000535916 PLA2G2CQ5R387 149 aa12.47□□□□□ -0.41
VBP1-203ENST00000535916 SPRYD7Q5W111 196 aa12.47□□□□□ -0.41
VBP1-203ENST00000535916 LMOD2Q6P5Q4 547 aa12.45□□□□□ -0.42
VBP1-203ENST00000535916 TRIM67Q6ZTA4 783 aa12.45□□□□□ -0.42
VBP1-203ENST00000535916 FMNL1O95466 1100 aaPredicted RBP12.44□□□□□ -0.42
VBP1-203ENST00000535916 ZNF775Q96BV0 537 aaPredicted RBP12.44□□□□□ -0.42
VBP1-203ENST00000535916 ZNF598Q86UK7 904 aaKnown RBP12.43□□□□□ -0.42
VBP1-203ENST00000535916 FAM160A2Q8N612 972 aaPredicted RBP12.43□□□□□ -0.42
VBP1-203ENST00000535916 BRICD5Q6PL45 260 aa12.42□□□□□ -0.42
VBP1-203ENST00000535916 RNF19BQ6ZMZ0 732 aa12.42□□□□□ -0.42
VBP1-203ENST00000535916 PRDM9Q9NQV7 894 aa12.42□□□□□ -0.42
VBP1-203ENST00000535916 GRIPAP1Q4V328 841 aa12.41□□□□□ -0.42
VBP1-203ENST00000535916 ZNF697Q5TEC3 545 aa12.41□□□□□ -0.42
VBP1-203ENST00000535916 SALL2Q9Y467 1007 aaPredicted RBP12.41□□□□□ -0.42
VBP1-203ENST00000535916 KDM4AO75164 1064 aa12.39□□□□□ -0.43
VBP1-203ENST00000535916 FCF1Q9Y324 198 aaKnown RBP12.39□□□□□ -0.43
VBP1-203ENST00000535916 GPCPD1Q9NPB8 672 aa12.38□□□□□ -0.43
VBP1-203ENST00000535916 CLCN1P35523 988 aa12.37□□□□□ -0.43
VBP1-203ENST00000535916 HLA-CQ95604 372 aa12.36□□□□□ -0.43
VBP1-203ENST00000535916 FAM217BQ9NTX9 383 aaPredicted RBP12.36□□□□□ -0.43
VBP1-203ENST00000535916 PRR20EP86478 221 aa12.35□□□□□ -0.43
VBP1-203ENST00000535916 PRR20CP86479 221 aa12.35□□□□□ -0.43
VBP1-203ENST00000535916 PRR20DP86480 221 aa12.35□□□□□ -0.43
VBP1-203ENST00000535916 PRR20BP86481 221 aa12.35□□□□□ -0.43
VBP1-203ENST00000535916 PRR20AP86496 221 aa12.35□□□□□ -0.43
VBP1-203ENST00000535916 MSS51Q4VC12 460 aa12.35□□□□□ -0.43
VBP1-203ENST00000535916 TNFRSF10AO00220 468 aa12.34□□□□□ -0.43
VBP1-203ENST00000535916 Q3C1V9 767 aa12.34□□□□□ -0.43
VBP1-203ENST00000535916 KRI1Q8N9T8 703 aaKnown RBP12.34□□□□□ -0.43
VBP1-203ENST00000535916 GDF9O60383 454 aa12.33□□□□□ -0.44
VBP1-203ENST00000535916 USP46P62068 366 aa12.33□□□□□ -0.44
VBP1-203ENST00000535916 BARGINQ6ZT62 677 aa12.33□□□□□ -0.44
VBP1-203ENST00000535916 REPIN1Q9BWE0 567 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms