RNA–Protein interactions for RNA: ENST00000535451.5

LDHA-213, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-213ENST00000535451 ADGRB3O60242 1522 aa19.06■□□□□ 0.64
LDHA-213ENST00000535451 PPP1R15AO75807 674 aaPredicted RBP19.05■□□□□ 0.64
LDHA-213ENST00000535451 FAM50AQ14320 339 aaKnown RBP19.05■□□□□ 0.64
LDHA-213ENST00000535451 NKTRP30414 1462 aaKnown RBP19.03■□□□□ 0.64
LDHA-213ENST00000535451 CHGAP10645 457 aaKnown RBP19.01■□□□□ 0.63
LDHA-213ENST00000535451 HDGFP51858 240 aaKnown RBP19.01■□□□□ 0.63
LDHA-213ENST00000535451 NWD1Q149M9 1564 aa19.01■□□□□ 0.63
LDHA-213ENST00000535451 C14orf37Q86TY3 774 aa19■□□□□ 0.63
LDHA-213ENST00000535451 RIMS2Q9UQ26 1411 aa19■□□□□ 0.63
LDHA-213ENST00000535451 PLEKHG1Q9ULL1 1385 aa18.99■□□□□ 0.63
LDHA-213ENST00000535451 ANKRD50Q9ULJ7 1429 aa18.99■□□□□ 0.63
LDHA-213ENST00000535451 JCADQ9P266 1359 aa18.98■□□□□ 0.63
LDHA-213ENST00000535451 NUTM2DQ5VT03 806 aaPredicted RBP18.98■□□□□ 0.63
LDHA-213ENST00000535451 ZFYVE9O95405 1425 aa18.98■□□□□ 0.63
LDHA-213ENST00000535451 ADGRL2O95490 1459 aa18.97■□□□□ 0.63
LDHA-213ENST00000535451 PHLPP1O60346 1717 aa18.97■□□□□ 0.63
LDHA-213ENST00000535451 RPRD2Q5VT52 1461 aaKnown RBP18.97■□□□□ 0.63
LDHA-213ENST00000535451 TBX22Q9Y458 520 aa18.95■□□□□ 0.62
LDHA-213ENST00000535451 MEX3CQ5U5Q3 659 aaKnown RBP18.94■□□□□ 0.62
LDHA-213ENST00000535451 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.94■□□□□ 0.62
LDHA-213ENST00000535451 MYO5BQ9ULV0 1848 aa18.93■□□□□ 0.62
LDHA-213ENST00000535451 CHD2O14647 1828 aaKnown RBP18.93■□□□□ 0.62
LDHA-213ENST00000535451 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
LDHA-213ENST00000535451 TMEM131LA2VDJ0 1609 aa18.92■□□□□ 0.62
LDHA-213ENST00000535451 ATF3P18847 181 aa18.91■□□□□ 0.62
LDHA-213ENST00000535451 C19orf44Q9H6X5 657 aa18.9■□□□□ 0.62
LDHA-213ENST00000535451 SETD1AO15047 1707 aaKnown RBP18.9■□□□□ 0.62
LDHA-213ENST00000535451 CADPS2Q86UW7 1296 aa18.89■□□□□ 0.61
LDHA-213ENST00000535451 COL16A1Q07092 1604 aaPredicted RBP18.89■□□□□ 0.61
LDHA-213ENST00000535451 SPATA31A6Q5VVP1 1343 aa18.88■□□□□ 0.61
LDHA-213ENST00000535451 ADAMTS13Q76LX8 1427 aa18.88■□□□□ 0.61
LDHA-213ENST00000535451 NCOA3Q9Y6Q9 1424 aa18.88■□□□□ 0.61
LDHA-213ENST00000535451 LRP6O75581 1613 aa18.87■□□□□ 0.61
LDHA-213ENST00000535451 TRIM52Q96A61 297 aa18.87■□□□□ 0.61
LDHA-213ENST00000535451 ZNF772Q68DY9 489 aaPredicted RBP18.86■□□□□ 0.61
LDHA-213ENST00000535451 AMOTL2Q9Y2J4 779 aa18.86■□□□□ 0.61
LDHA-213ENST00000535451 NUTM2BA6NNL0 878 aaPredicted RBP18.85■□□□□ 0.61
LDHA-213ENST00000535451 NUTM2EB1AL46 878 aaPredicted RBP18.85■□□□□ 0.61
LDHA-213ENST00000535451 NUTM2AQ8IVF1 878 aaPredicted RBP18.85■□□□□ 0.61
LDHA-213ENST00000535451 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.83■□□□□ 0.61
LDHA-213ENST00000535451 PIK3R4Q99570 1358 aa18.83■□□□□ 0.61
LDHA-213ENST00000535451 UNC13BO14795 1591 aa18.83■□□□□ 0.6
LDHA-213ENST00000535451 E9PCH4 1651 aa18.82■□□□□ 0.6
LDHA-213ENST00000535451 BRINP3Q76B58 766 aa18.82■□□□□ 0.6
LDHA-213ENST00000535451 NUP155O75694 1391 aa18.81■□□□□ 0.6
LDHA-213ENST00000535451 DIP2AQ14689 1571 aa18.81■□□□□ 0.6
LDHA-213ENST00000535451 ITGAEP38570 1179 aa18.81■□□□□ 0.6
LDHA-213ENST00000535451 UPF1Q92900 1129 aaKnown RBP eCLIP18.81■□□□□ 0.6
LDHA-213ENST00000535451 PTPRUQ92729 1446 aa18.81■□□□□ 0.6
LDHA-213ENST00000535451 AHDC1Q5TGY3 1603 aaPredicted RBP18.81■□□□□ 0.6
LDHA-213ENST00000535451 TRPM2O94759 1503 aa18.79■□□□□ 0.6
LDHA-213ENST00000535451 RXRBP28702 533 aa18.79■□□□□ 0.6
LDHA-213ENST00000535451 ZNF326Q5BKZ1 582 aaKnown RBP18.78■□□□□ 0.6
LDHA-213ENST00000535451 ROCK1Q13464 1354 aa18.78■□□□□ 0.6
LDHA-213ENST00000535451 SHPRHQ149N8 1683 aa18.76■□□□□ 0.59
LDHA-213ENST00000535451 IQGAP3Q86VI3 1631 aa18.76■□□□□ 0.59
LDHA-213ENST00000535451 AFF2P51816 1311 aa18.74■□□□□ 0.59
LDHA-213ENST00000535451 DDX17Q92841 729 aaKnown RBP18.73■□□□□ 0.59
LDHA-213ENST00000535451 ASXL1Q8IXJ9 1541 aa18.73■□□□□ 0.59
LDHA-213ENST00000535451 DCCP43146 1447 aa18.72■□□□□ 0.59
LDHA-213ENST00000535451 METP08581 1390 aa18.71■□□□□ 0.59
LDHA-213ENST00000535451 PPARGC1BQ86YN6 1023 aaKnown RBP18.71■□□□□ 0.59
LDHA-213ENST00000535451 LRRC59Q96AG4 307 aaKnown RBP18.71■□□□□ 0.59
LDHA-213ENST00000535451 MST1RQ04912 1400 aa18.71■□□□□ 0.59
LDHA-213ENST00000535451 C8orf37Q96NL8 207 aa18.7■□□□□ 0.58
LDHA-213ENST00000535451 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
LDHA-213ENST00000535451 NRXN3Q9Y4C0 1643 aa18.68■□□□□ 0.58
LDHA-213ENST00000535451 XRN1Q8IZH2 1706 aaKnown RBP18.68■□□□□ 0.58
LDHA-213ENST00000535451 SETBP1Q9Y6X0 1596 aa18.68■□□□□ 0.58
LDHA-213ENST00000535451 QTRT2Q9H974 415 aaKnown RBP18.67■□□□□ 0.58
LDHA-213ENST00000535451 CDK12Q9NYV4 1490 aaPredicted RBP18.65■□□□□ 0.58
LDHA-213ENST00000535451 ADAMTS2O95450 1211 aa18.65■□□□□ 0.58
LDHA-213ENST00000535451 ADGRL3Q9HAR2 1447 aa18.65■□□□□ 0.58
LDHA-213ENST00000535451 RBM6P78332 1123 aaKnown RBP18.64■□□□□ 0.57
LDHA-213ENST00000535451 NGLY1Q96IV0 654 aa18.64■□□□□ 0.57
LDHA-213ENST00000535451 PNPLA6Q8IY17 1366 aa18.64■□□□□ 0.57
LDHA-213ENST00000535451 NHSL1Q5SYE7 1610 aa18.63■□□□□ 0.57
LDHA-213ENST00000535451 SPHKAPQ2M3C7 1700 aa18.63■□□□□ 0.57
LDHA-213ENST00000535451 RGS12O14924 1447 aa18.61■□□□□ 0.57
LDHA-213ENST00000535451 C1orf167Q5SNV9 1468 aa18.59■□□□□ 0.57
LDHA-213ENST00000535451 ORAI2Q96SN7 254 aa18.59■□□□□ 0.57
LDHA-213ENST00000535451 NEXMIFQ5QGS0 1516 aa18.59■□□□□ 0.57
LDHA-213ENST00000535451 NALCNQ8IZF0 1738 aa18.58■□□□□ 0.57
LDHA-213ENST00000535451 CLTCL1P53675 1640 aa18.58■□□□□ 0.56
LDHA-213ENST00000535451 VGFO15240 615 aaPredicted RBP18.56■□□□□ 0.56
LDHA-213ENST00000535451 USP21Q9UK80 565 aa18.56■□□□□ 0.56
LDHA-213ENST00000535451 ROBO2Q9HCK4 1378 aa18.55■□□□□ 0.56
LDHA-213ENST00000535451 SRCAPQ6ZRS2 3230 aa18.55■□□□□ 0.56
LDHA-213ENST00000535451 SOS2Q07890 1332 aaPredicted RBP18.53■□□□□ 0.56
LDHA-213ENST00000535451 PTCH1Q13635 1447 aa18.52■□□□□ 0.56
LDHA-213ENST00000535451 TRPC5Q9UL62 973 aaPredicted RBP18.52■□□□□ 0.56
LDHA-213ENST00000535451 ATAD2Q6PL18 1390 aa18.51■□□□□ 0.55
LDHA-213ENST00000535451 KIF1BO60333 1816 aa18.51■□□□□ 0.55
LDHA-213ENST00000535451 ESCO1Q5FWF5 840 aa18.49■□□□□ 0.55
LDHA-213ENST00000535451 FNBP4Q8N3X1 1017 aaPredicted RBP18.48■□□□□ 0.55
LDHA-213ENST00000535451 NAIPQ13075 1403 aa18.48■□□□□ 0.55
LDHA-213ENST00000535451 RPGRIP1LQ68CZ1 1315 aa18.48■□□□□ 0.55
LDHA-213ENST00000535451 XPCQ01831 940 aaPredicted RBP18.47■□□□□ 0.55
LDHA-213ENST00000535451 SLC4A1APQ9BWU0 796 aaKnown RBP18.47■□□□□ 0.55
LDHA-213ENST00000535451 LAMC1P11047 1609 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms