RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 RSPH4AQ5TD94 716 aa9.62□□□□□ -0.87
ITGB1-219ENST00000534049 LMOD2Q6P5Q4 547 aa9.62□□□□□ -0.87
ITGB1-219ENST00000534049 MAP2K5Q13163 448 aa9.61□□□□□ -0.87
ITGB1-219ENST00000534049 ITGBL1O95965 494 aaPredicted RBP9.6□□□□□ -0.87
ITGB1-219ENST00000534049 MINK1Q8N4C8 1332 aaPredicted RBP9.58□□□□□ -0.88
ITGB1-219ENST00000534049 FECHP22830 423 aa9.58□□□□□ -0.88
ITGB1-219ENST00000534049 FAM161AQ3B820 660 aa9.58□□□□□ -0.88
ITGB1-219ENST00000534049 KCNC4Q03721 635 aa9.56□□□□□ -0.88
ITGB1-219ENST00000534049 KMT5BQ4FZB7 885 aa9.56□□□□□ -0.88
ITGB1-219ENST00000534049 IRF6O14896 467 aa9.55□□□□□ -0.88
ITGB1-219ENST00000534049 SULF1Q8IWU6 871 aa9.55□□□□□ -0.88
ITGB1-219ENST00000534049 DAXXQ9UER7 740 aaPredicted RBP9.55□□□□□ -0.88
ITGB1-219ENST00000534049 BCANQ96GW7 911 aa9.54□□□□□ -0.88
ITGB1-219ENST00000534049 APLP1P51693 650 aa9.52□□□□□ -0.89
ITGB1-219ENST00000534049 IL21Q9HBE4 155 aa9.52□□□□□ -0.89
ITGB1-219ENST00000534049 RGS20O76081 388 aa9.5□□□□□ -0.89
ITGB1-219ENST00000534049 CFHP08603 1231 aa9.5□□□□□ -0.89
ITGB1-219ENST00000534049 MTRQ99707 1265 aa9.5□□□□□ -0.89
ITGB1-219ENST00000534049 A0A0G2JS52 829 aa9.49□□□□□ -0.89
ITGB1-219ENST00000534049 ACTN4O43707 911 aaKnown RBP9.49□□□□□ -0.89
ITGB1-219ENST00000534049 ZMYND10O75800 440 aa9.49□□□□□ -0.89
ITGB1-219ENST00000534049 TJAP1Q5JTD0 557 aa9.49□□□□□ -0.89
ITGB1-219ENST00000534049 BARGINQ6ZT62 677 aa9.49□□□□□ -0.89
ITGB1-219ENST00000534049 KRI1Q8N9T8 703 aaKnown RBP9.49□□□□□ -0.89
ITGB1-219ENST00000534049 ZC3H15Q8WU90 426 aaKnown RBP9.49□□□□□ -0.89
ITGB1-219ENST00000534049 CCDC102AQ96A19 550 aa9.49□□□□□ -0.89
ITGB1-219ENST00000534049 PCDHB3Q9Y5E6 796 aa9.49□□□□□ -0.89
ITGB1-219ENST00000534049 RDH13Q8NBN7 331 aa9.47□□□□□ -0.89
ITGB1-219ENST00000534049 SLC10A3P09131 477 aa9.46□□□□□ -0.9
ITGB1-219ENST00000534049 PHOX2BQ99453 314 aa9.46□□□□□ -0.9
ITGB1-219ENST00000534049 DDX11L8A8MPP1 907 aa9.45□□□□□ -0.9
ITGB1-219ENST00000534049 CLCN1P35523 988 aa9.45□□□□□ -0.9
ITGB1-219ENST00000534049 NR1I2O75469 434 aa9.43□□□□□ -0.9
ITGB1-219ENST00000534049 GPCPD1Q9NPB8 672 aa9.43□□□□□ -0.9
ITGB1-219ENST00000534049 GGCXP38435 758 aa9.42□□□□□ -0.9
ITGB1-219ENST00000534049 COPS2P61201 443 aa9.42□□□□□ -0.9
ITGB1-219ENST00000534049 MDM2Q00987 491 aaPredicted RBP9.42□□□□□ -0.9
ITGB1-219ENST00000534049 GRIPAP1Q4V328 841 aa9.42□□□□□ -0.9
ITGB1-219ENST00000534049 ZPR1O75312 459 aa9.41□□□□□ -0.9
ITGB1-219ENST00000534049 GCGRP47871 477 aa9.4□□□□□ -0.9
ITGB1-219ENST00000534049 BLOC1S3Q6QNY0 202 aa9.4□□□□□ -0.9
ITGB1-219ENST00000534049 NLRP7Q8WX94 980 aa9.4□□□□□ -0.9
ITGB1-219ENST00000534049 AMHR2Q16671 573 aa9.39□□□□□ -0.91
ITGB1-219ENST00000534049 CD46P15529 392 aa9.38□□□□□ -0.91
ITGB1-219ENST00000534049 ATP6V1AP38606 617 aa9.38□□□□□ -0.91
ITGB1-219ENST00000534049 AK7Q96M32 723 aa9.38□□□□□ -0.91
ITGB1-219ENST00000534049 USP46P62068 366 aa9.37□□□□□ -0.91
ITGB1-219ENST00000534049 ZNF516Q92618 1163 aa9.37□□□□□ -0.91
ITGB1-219ENST00000534049 TMUB1Q9BVT8 246 aa9.37□□□□□ -0.91
ITGB1-219ENST00000534049 TTLL12Q14166 644 aaPredicted RBP9.36□□□□□ -0.91
ITGB1-219ENST00000534049 FAM217BQ9NTX9 383 aaPredicted RBP9.36□□□□□ -0.91
ITGB1-219ENST00000534049 FUT2Q10981 343 aa9.34□□□□□ -0.91
ITGB1-219ENST00000534049 MORN1Q5T089 497 aa9.34□□□□□ -0.91
ITGB1-219ENST00000534049 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.34□□□□□ -0.91
ITGB1-219ENST00000534049 KDM4AO75164 1064 aa9.33□□□□□ -0.92
ITGB1-219ENST00000534049 ADH1BP00325 375 aa9.33□□□□□ -0.92
ITGB1-219ENST00000534049 SCUBE3Q8IX30 993 aa9.33□□□□□ -0.92
ITGB1-219ENST00000534049 SALL2Q9Y467 1007 aaPredicted RBP9.33□□□□□ -0.92
ITGB1-219ENST00000534049 Q3C1V9 767 aa9.32□□□□□ -0.92
ITGB1-219ENST00000534049 PPP1R18Q6NYC8 613 aa9.32□□□□□ -0.92
ITGB1-219ENST00000534049 TRIM66O15016 1216 aa9.31□□□□□ -0.92
ITGB1-219ENST00000534049 PUS10Q3MIT2 529 aaKnown RBP9.31□□□□□ -0.92
ITGB1-219ENST00000534049 FMNL1O95466 1100 aaPredicted RBP9.3□□□□□ -0.92
ITGB1-219ENST00000534049 SSTR3P32745 418 aaPredicted RBP9.3□□□□□ -0.92
ITGB1-219ENST00000534049 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
ITGB1-219ENST00000534049 NKX2-3Q8TAU0 364 aa9.3□□□□□ -0.92
ITGB1-219ENST00000534049 DIXDC1Q155Q3 683 aa9.29□□□□□ -0.92
ITGB1-219ENST00000534049 GIGYF2Q6Y7W6 1299 aaKnown RBP9.29□□□□□ -0.92
ITGB1-219ENST00000534049 SPSB2Q99619 263 aa9.29□□□□□ -0.92
ITGB1-219ENST00000534049 TLL1O43897 1013 aa9.28□□□□□ -0.92
ITGB1-219ENST00000534049 SLC6A16Q9GZN6 736 aa9.28□□□□□ -0.92
ITGB1-219ENST00000534049 SLC27A5Q9Y2P5 690 aa9.28□□□□□ -0.92
ITGB1-219ENST00000534049 V9GY48 417 aaPredicted RBP9.28□□□□□ -0.92
ITGB1-219ENST00000534049 HOXA2O43364 376 aa9.26□□□□□ -0.93
ITGB1-219ENST00000534049 PARP9Q8IXQ6 854 aa9.26□□□□□ -0.93
ITGB1-219ENST00000534049 ANKLE1Q8NAG6 615 aa9.26□□□□□ -0.93
ITGB1-219ENST00000534049 PDE4DQ08499 809 aa9.25□□□□□ -0.93
ITGB1-219ENST00000534049 THAP11Q96EK4 314 aa9.25□□□□□ -0.93
ITGB1-219ENST00000534049 REPIN1Q9BWE0 567 aaKnown RBP9.25□□□□□ -0.93
ITGB1-219ENST00000534049 SLC24A3Q9HC58 644 aa9.25□□□□□ -0.93
ITGB1-219ENST00000534049 S1PR4O95977 384 aa9.24□□□□□ -0.93
ITGB1-219ENST00000534049 MSS51Q4VC12 460 aa9.24□□□□□ -0.93
ITGB1-219ENST00000534049 BRICD5Q6PL45 260 aa9.24□□□□□ -0.93
ITGB1-219ENST00000534049 RNF223E7ERA6 249 aa9.23□□□□□ -0.93
ITGB1-219ENST00000534049 PRKD2Q9BZL6 878 aa9.23□□□□□ -0.93
ITGB1-219ENST00000534049 BEGAINQ9BUH8 593 aa9.22□□□□□ -0.93
ITGB1-219ENST00000534049 GJA5P36382 358 aa9.21□□□□□ -0.94
ITGB1-219ENST00000534049 IRX2Q9BZI1 471 aaPredicted RBP9.21□□□□□ -0.94
ITGB1-219ENST00000534049 USB1Q9BQ65 265 aaKnown RBP9.2□□□□□ -0.94
ITGB1-219ENST00000534049 LAPTM4AQ15012 233 aa9.19□□□□□ -0.94
ITGB1-219ENST00000534049 SPIRE2Q8WWL2 714 aa9.19□□□□□ -0.94
ITGB1-219ENST00000534049 FDX1P10109 184 aa9.18□□□□□ -0.94
ITGB1-219ENST00000534049 RNF19BQ6ZMZ0 732 aa9.18□□□□□ -0.94
ITGB1-219ENST00000534049 MS4A1P11836 297 aa9.17□□□□□ -0.94
ITGB1-219ENST00000534049 SLC19A1P41440 591 aa9.17□□□□□ -0.94
ITGB1-219ENST00000534049 RETREG3Q86VR2 466 aa9.17□□□□□ -0.94
ITGB1-219ENST00000534049 FAM160A2Q8N612 972 aaPredicted RBP9.17□□□□□ -0.94
ITGB1-219ENST00000534049 SPDYE5A6NIY4 337 aa9.16□□□□□ -0.94
ITGB1-219ENST00000534049 MMP16P51512 607 aa9.15□□□□□ -0.94
ITGB1-219ENST00000534049 TBC1D2Q9BYX2 928 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms